Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.4e-30 135.6 65 100.0
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 9.9e-29 129.4 65 96.9
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.1e-26 121.7 63 92.1
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.1e-26 121.7 63 92.1
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 3.3e-24 114.4 61 86.9
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 2.1e-23 111.7 62 83.9
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 3.7e-23 110.9 62 80.6
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 3.7e-23 110.9 62 80.6
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 3.7e-23 110.9 62 80.6
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 6.2e-23 110.2 61 83.6
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 1.4e-22 109.0 62 80.6
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 1.8e-22 108.6 62 79.0
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.8e-22 108.6 62 75.8
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 2.4e-22 108.2 62 79.0
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 2.4e-22 108.2 62 80.6
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 3.1e-22 107.8 62 75.8
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 4.0e-22 107.5 62 79.0
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 4.0e-22 107.5 62 75.8
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 5.3e-22 107.1 56 85.7
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 5.3e-22 107.1 61 80.3
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 9.0e-22 106.3 62 74.2
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 9.0e-22 106.3 62 74.2
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 9.0e-22 106.3 62 74.2
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 9.0e-22 106.3 62 74.2
TWI23G0494 Tripterygium wilfordii HOM05D007316 ORTHO05D009393 9.0e-22 106.3 62 79.0
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 1.2e-21 105.9 61 78.7
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 79.0
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 75.8
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 2.6e-21 104.8 61 78.7
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 3.4e-21 104.4 61 78.7
SalBow3G1440 Salvia bowleyana HOM05D007316 ORTHO05D009393 3.4e-21 104.4 61 78.7
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 4.5e-21 104.0 61 78.7
Glyma.19G223500 Glycine max HOM05D007316 ORTHO05D009393 4.5e-21 104.0 61 78.7
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 4.5e-21 104.0 61 78.7
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 5.8e-21 103.6 62 75.8
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 5.8e-21 103.6 62 75.8
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 5.8e-21 103.6 62 75.8
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 5.8e-21 103.6 62 75.8
Glyma.03G226500 Glycine max HOM05D007316 ORTHO05D009393 7.6e-21 103.2 61 78.7
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 7.6e-21 103.2 61 78.7
AL2G32940 Arabidopsis lyrata HOM05D007316 ORTHO05D009393 1.3e-20 102.4 62 74.2
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 1.3e-20 102.4 61 78.7
Aa31LG4G3460 Aethionema arabicum HOM05D007316 ORTHO05D009393 1.7e-20 102.1 62 75.8
Cfa016046 Carpinus fangiana HOM05D007316 ORTHO05D009393 1.7e-20 102.1 62 75.8
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 1.7e-20 102.1 60 76.7
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 1.7e-20 102.1 60 76.7
Potri.011G067800 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.7e-20 102.1 61 75.4
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 2.2e-20 101.7 61 77.0
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 2.2e-20 101.7 58 81.0
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 2.2e-20 101.7 66 74.2
CsaV3_2G036390 Cucumis sativus L. HOM05D007316 ORTHO05D009393 2.9e-20 101.3 61 77.0
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 4.9e-20 100.5 62 74.2
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 4.9e-20 100.5 62 72.6
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 4.9e-20 100.5 66 72.7
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 6.5e-20 100.1 62 77.4
arahy.Tifrunner.gnm1.ann1.AE1MMP Arachis hypogaea HOM05D007316 ORTHO05D009393 8.4e-20 99.8 61 73.8
arahy.Tifrunner.gnm1.ann1.CUXT1U Arachis hypogaea HOM05D007316 ORTHO05D009393 8.4e-20 99.8 61 73.8
Lj1g0006735 Lotus japonicus HOM05D007316 ORTHO05D009393 1.4e-19 99.0 61 70.5
Atru.chr12.1494 Acer truncatum HOM05D007316 ORTHO05D009393 3.2e-19 97.8 61 75.4
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 3.2e-19 97.8 63 73.0
AT1G73177 Arabidopsis thaliana HOM05D007316 ORTHO05D009393 4.2e-19 97.4 62 71.0
CARHR066170 Cardamine hirsuta HOM05D007316 ORTHO05D009393 4.2e-19 97.4 62 71.0
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 7.1e-19 96.7 63 71.4
Carub.0002s1996 Capsella rubella HOM05D007316 ORTHO05D009393 1.6e-18 95.5 62 69.4
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 2.1e-18 95.1 60 71.7
BcaC08g45665 Brassica carinata HOM05D007316 ORTHO05D009393 2.7e-18 94.7 77 62.3
PGR119G2118 Punica granatum HOM05D007316 ORTHO05D009393 3.5e-18 94.4 60 71.7
Aqoxy7G02856 Aquilegia oxysepala HOM05D007316 ORTHO05D009393 4.6e-18 94.0 60 71.7
Lalb_Chr04g0260251 Lupinus albus HOM05D007316 ORTHO05D009393 6.0e-18 93.6 59 71.2
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 1.0e-17 92.8 63 66.7
TAR362G0014 Trochodendron aralioides HOM05D007316 ORTHO05D009393 4.1e-14 80.9 43 83.7
ECA236G4186 Erigeron canadensis HOM05D007316 ORTHO05D009393 1.2e-13 79.3 64 59.4
vmacro19806 Vaccinium macrocarpon HOM05D007316 ORTHO05D009393 1.2e-13 79.3 50 74.0
CSS0021742 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.0e-13 78.6 48 77.1
CiPaw.05G216300 Carya illinoinensis HOM05D007316 ORTHO05D009393 5.9e-13 77.0 55 70.9
Nn7g37509 Nelumbo nucifera HOM05D007316 ORTHO05D009393 5.9e-13 77.0 42 85.7
CSS0008863 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.0e-12 76.3 43 86.0
CSS0044079 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.0e-12 76.3 43 86.0
CSS0028514 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.3e-12 75.9 43 83.7
CSS0044918 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.3e-12 75.9 43 83.7
CSS0047183 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.3e-12 75.9 43 83.7
Oeu034759.1 Olea europaea HOM05D007316 ORTHO05D009393 1.3e-12 75.9 43 79.1
Thhalv10019421m.g Eutrema salsugineum HOM05D007316 ORTHO05D009393 1.7e-12 75.5 59 62.7
Os07g0633800 Oryza sativa ssp. japonica HOM05D007316 ORTHO05D009393 1.7e-12 75.5 60 58.3
GSVIVG01026029001 Vitis vinifera HOM05D007316 ORTHO05D009393 2.9e-12 74.7 43 76.7
CSS0047605 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.4e-12 73.2 43 81.4
CSS0025187 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.1e-11 72.8 43 79.1
MBI18_g28941_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004701 3.2e-11 71.2 44 72.7
Actinidia11709 Actinidia chinensis HOM05D007316 ORTHO05D009393 1.6e-10 68.9 35 85.7
Gorai.013G118500 Gossypium raimondii HOM05D007316 ORTHO05D009393 1.8e-09 65.5 62 54.8
EL10Ac8g18312 Beta vulgaris HOM05D007316 ORTHO05D009393 3.9e-09 64.3 47 63.8
Rhsim05G0117300 Rhododendron simsii HOM05D007316 ORTHO05D009393 5.1e-09 63.9 63 57.1
RhsimUnG0015700 Rhododendron simsii HOM05D007316 ORTHO05D009393 5.1e-09 63.9 63 57.1
AUR62021328 Chenopodium quinoa HOM05D007316 ORTHO05D009393 1.5e-08 62.4 46 58.7
Ah.09g230190 Amaranthus hybridus HOM05D007316 ORTHO05D009393 3.3e-08 61.2 48 58.3
Gohir.A13G102600 Gossypium hirsutum HOM05D007316 ORTHO05D009393 4.3e-08 60.8 62 51.6
Mapoly0010s0075 Marchantia polymorpha HOM05D007316 ORTHO05D009393 5.7e-08 60.5 59 47.5
Solyc08g006570.4 Solanum lycopersicum HOM05D007316 ORTHO05D009393 5.7e-08 60.5 39 66.7
CAN.G530.4 Capsicum annuum HOM05D007316 ORTHO05D009393 2.2e-07 58.5 35 71.4
MCO03G596 Micromonas commoda HOM05D007316 ORTHO05D009393 2.8e-07 58.2 56 44.6
HPP92_022152 Vanilla planifolia HOM05D007316 ORTHO05D009393 1.4e-06 55.8 60 51.7


User provided reference genes

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