Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015415 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 1.4e-146 523.1 301 100.0
CSS0033849 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 6.2e-134 481.1 337 87.2
CSS0034079 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 1.3e-131 473.4 326 87.7
CSS0000799 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 1.4e-130 469.9 343 83.1
CSS0000537 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 5.3e-125 451.4 336 83.0
CSS0001180 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 1.8e-120 436.4 337 76.6
CSS0036229 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 1.3e-102 377.1 329 71.1
Dinv44406 Davidia involucrata HOM05D001685 ORTHO05D007488 1.2e-84 317.4 347 59.1
Rhsim04G0218700 Rhododendron simsii HOM05D001685 ORTHO05D007488 1.7e-75 287.0 347 61.1
Actinidia01944 Actinidia chinensis HOM05D001685 ORTHO05D007488 3.8e-75 285.8 394 50.3
Hma1.2p1_0698F.1_g205400 Hydrangea macrophylla HOM05D001685 ORTHO05D007488 1.2e-73 280.8 334 53.6
vmacro08110 Vaccinium macrocarpon HOM05D001685 ORTHO05D007488 7.5e-71 271.6 344 54.7
Nitab4.5_0000644g0130 Nicotiana tabacum HOM05D001685 ORTHO05D007488 4.1e-69 265.8 308 54.2
Nitab4.5_0000784g0140 Nicotiana tabacum HOM05D001685 ORTHO05D007488 1.6e-68 263.8 300 57.3
Sopen01g029480 Solanum pennellii HOM05D001685 ORTHO05D007488 1.6e-68 263.8 303 55.1
CAN.G580.1 Capsicum annuum HOM05D001685 ORTHO05D007488 3.5e-68 262.7 302 54.0
Solyc01g067530.3 Solanum lycopersicum HOM05D001685 ORTHO05D007488 3.5e-68 262.7 303 57.8
HanXRQChr03g0079811 Helianthus annuus HOM05D001685 ORTHO05D007488 4.5e-68 262.3 284 55.6
TAR636G1751 Trochodendron aralioides HOM05D001685 ORTHO05D007488 2.3e-67 260.0 344 49.1
DCAR_024555 Daucus carota HOM05D001685 ORTHO05D007488 5.6e-66 255.4 278 55.8
CiPaw.01G151100 Carya illinoinensis HOM05D001685 ORTHO05D007488 7.3e-66 255.0 388 45.9
Peaxi162Scf00386g00526 Petunia axillaris HOM05D001685 ORTHO05D007488 2.1e-65 253.4 298 53.4
Sc13g0003540 Simmondsia chinensis HOM05D001685 ORTHO05D007488 1.4e-64 250.8 346 48.0
MBI19_g36823_MAGBIO Magnolia biondii HOM05D001685 ORTHO05D007488 2.3e-64 250.0 262 59.2
AL6G29840 Arabidopsis lyrata HOM05D001685 ORTHO05D007488 3.4e-63 246.1 306 51.0
TWI09G0695 Tripterygium wilfordii HOM05D001685 ORTHO05D007488 1.3e-62 244.2 291 54.3
Cc03_g02120 Coffea canephora HOM05D001685 ORTHO05D007488 2.2e-62 243.4 343 49.0
ECA240G2366 Erigeron canadensis HOM05D001685 ORTHO05D007488 2.2e-62 243.4 288 52.8
Nn3g21379 Nelumbo nucifera HOM05D001685 ORTHO05D007488 6.4e-62 241.9 344 48.8
MD16G1172900 Malus domestica HOM05D001685 ORTHO05D007488 1.1e-61 241.1 362 47.8
Aqoxy1G01559 Aquilegia oxysepala HOM05D001685 ORTHO05D007488 1.9e-61 240.4 281 54.4
Prupe.1G139700 Prunus persica HOM05D001685 ORTHO05D007488 2.4e-61 240.0 366 46.2
Lsat_1_v5_gn_5_51241 Lactuca sativa HOM05D001685 ORTHO05D007488 2.0e-60 236.9 345 45.8
Carub.0006s1685 Capsella rubella HOM05D001685 ORTHO05D007488 2.7e-60 236.5 300 52.3
Hund17597 Selenicereus undatus HOM05D001685 ORTHO05D007488 2.7e-60 236.5 266 55.6
Lalb_Chr18g0055611 Lupinus albus HOM05D001685 ORTHO05D007488 3.5e-60 236.1 351 49.0
Ah.04g153910 Amaranthus hybridus HOM05D001685 ORTHO05D007488 4.6e-60 235.7 279 54.5
THA.LOC104802719 Tarenaya hassleriana HOM05D001685 ORTHO05D007488 6.0e-60 235.3 384 45.6
AT5G18570 Arabidopsis thaliana HOM05D001685 ORTHO05D007488 7.8e-60 235.0 300 51.3
CARHR194450 Cardamine hirsuta HOM05D001685 ORTHO05D007488 1.0e-59 234.6 303 51.8
Manes.15G014800 Manihot esculenta HOM05D001685 ORTHO05D007488 1.0e-59 234.6 366 45.6
FAN07G1165 Fragaria x ananassa HOM05D001685 ORTHO05D007488 1.3e-59 234.2 351 48.4
SGA_v2.0_scaffold86G26925 Striga asiatica HOM05D001685 ORTHO05D007488 1.3e-59 234.2 334 48.8
FAN17G0087 Fragaria x ananassa HOM05D001685 ORTHO05D007488 1.7e-59 233.8 352 46.3
RcHm_v2.0_Chr4g0421541 Rosa chinensis HOM05D001685 ORTHO05D007488 2.3e-59 233.4 349 47.3
ATR0706G022 Amborella trichopoda HOM05D001685 ORTHO05D007488 1.1e-58 231.1 188 68.6
ClCG00G005760 Citrullus lanatus HOM05D001685 ORTHO05D007488 2.5e-58 229.9 368 46.7
C02p10030 Brassica napus HOM05D001685 ORTHO05D007488 4.3e-58 229.2 364 44.0
Sp6g25760 Schrenkiella parvula HOM05D001685 ORTHO05D007488 5.6e-58 228.8 377 44.8
BcaB05g23340 Brassica carinata HOM05D001685 ORTHO05D007488 1.6e-57 227.3 362 45.9
arahy.Tifrunner.gnm1.ann1.536D4K Arachis hypogaea HOM05D001685 ORTHO05D007488 2.1e-57 226.9 338 46.2
arahy.Tifrunner.gnm1.ann1.ADAJ08 Arachis hypogaea HOM05D001685 ORTHO05D007488 2.8e-57 226.5 350 46.0
Cfa015363 Carpinus fangiana HOM05D001685 ORTHO05D007488 3.6e-57 226.1 321 48.3
Haze_01243 Corylus avellana HOM05D001685 ORTHO05D007488 3.6e-57 226.1 327 48.0
Atru.chr4.2789 Acer truncatum HOM05D001685 ORTHO05D007488 8.0e-57 224.9 273 53.8
Migut.G00277 Erythranthe guttata HOM05D001685 ORTHO05D007488 8.0e-57 224.9 228 57.0
Sabra10G0015900 Salix brachista HOM05D001685 ORTHO05D007488 1.1e-56 224.6 347 45.2
Thhalv10012865m.g Eutrema salsugineum HOM05D001685 ORTHO05D007488 1.4e-56 224.2 382 45.5
CANSAT78G0268 Cannabis sativa HOM05D001685 ORTHO05D007488 2.3e-56 223.4 286 54.9
VMungo0540G1912 Vigna mungo HOM05D001685 ORTHO05D007488 4.0e-56 222.6 260 54.2
BolC2t06905H Brassica oleracea HOM05D001685 ORTHO05D007488 6.8e-56 221.9 368 45.7
Ciclev10004482m.g Citrus clementina HOM05D001685 ORTHO05D007488 6.8e-56 221.9 290 51.7
COL.COLO4_13905 Corchorus olitorius HOM05D001685 ORTHO05D007488 6.8e-56 221.9 287 51.6
ClCG05G005930 Citrullus lanatus HOM05D001685 ORTHO05D007488 1.5e-55 220.7 357 46.8
Eucgr.H03869 Eucalyptus grandis HOM05D001685 ORTHO05D007488 1.5e-55 220.7 322 45.3
Sed0007220 Sechium edule HOM05D001685 ORTHO05D007488 2.0e-55 220.3 351 48.4
Oeu021113.2 Olea europaea HOM05D001685 ORTHO05D007488 3.4e-55 219.5 293 52.6
Lj6g0018727 Lotus japonicus HOM05D001685 ORTHO05D007488 4.4e-55 219.2 335 49.0
MELO3C006624.2 Cucumis melo HOM05D001685 ORTHO05D007488 5.8e-55 218.8 365 45.2
FAN12G0539 Fragaria x ananassa HOM05D001685 ORTHO05D007488 5.8e-55 218.8 339 47.8
MSTRG.3936 Avicennia marina HOM05D001685 ORTHO05D007488 7.5e-55 218.4 293 48.5
BraA02t05459Z Brassica rapa HOM05D001685 ORTHO05D007488 9.8e-55 218.0 370 45.9
EL10Ac3g06577 Beta vulgaris HOM05D001685 ORTHO05D007488 1.3e-54 217.6 338 49.1
Ca_00557_v3 Cicer arietinum L. HOM05D001685 ORTHO05D007488 1.3e-54 217.6 336 45.8
Glyma.13G216800 Glycine max HOM05D001685 ORTHO05D007488 1.3e-54 217.6 259 54.1
CDE01G0502 Ceratophyllum demersum HOM05D001685 ORTHO05D007488 2.9e-54 216.5 277 51.6
SalBow2G3264 Salvia bowleyana HOM05D001685 ORTHO05D007488 2.9e-54 216.5 289 50.5
Phvul.006G163000 Phaseolus vulgaris HOM05D001685 ORTHO05D007488 3.7e-54 216.1 327 46.8
Prupe.1G145700 Prunus persica HOM05D001685 ORTHO05D007488 4.9e-54 215.7 232 56.5
Aa31LG11G11050 Aethionema arabicum HOM05D001685 ORTHO05D007488 8.3e-54 214.9 309 49.5
Potri.010G022400 Populus trichocarpa HOM05D001685 ORTHO05D007488 8.3e-54 214.9 356 44.7
FAN12G2140 Fragaria x ananassa HOM05D001685 ORTHO05D007488 1.9e-53 213.8 344 47.1
Gorai.011G188100 Gossypium raimondii HOM05D001685 ORTHO05D007488 4.1e-53 212.6 214 58.9
A02p05000 Brassica napus HOM05D001685 ORTHO05D007488 5.4e-53 212.2 372 45.2
PGR004G0738 Punica granatum HOM05D001685 ORTHO05D007488 5.4e-53 212.2 396 43.4
FvH4_4g17620 Fragaria vesca HOM05D001685 ORTHO05D007488 1.2e-52 211.1 344 46.8
Gohir.A10G162200 Gossypium hirsutum HOM05D001685 ORTHO05D007488 2.1e-52 210.3 214 57.9
Medtr2g019790 Medicago truncatula HOM05D001685 ORTHO05D007488 3.5e-52 209.5 336 44.6
Thecc.04G280200 Theobroma cacao HOM05D001685 ORTHO05D007488 6.0e-52 208.8 223 58.3
HPP92_001325 Vanilla planifolia HOM05D001685 ORTHO05D007488 1.7e-51 207.2 289 49.8
CsaV3_3G014310 Cucumis sativus L. HOM05D001685 ORTHO05D007488 8.6e-51 204.9 369 43.1
QL06p008035 Quercus lobata HOM05D001685 ORTHO05D007488 1.5e-50 204.1 370 43.2
Zm00001eb111050 Zea mays HOM05D001685 ORTHO05D007488 2.8e-49 199.9 177 64.4
Os07g0669200 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D007488 4.7e-49 199.1 162 66.7
Psat1g189920 Pisum sativum HOM05D001685 ORTHO05D007488 6.2e-49 198.7 331 45.0
Cpa.g.sc16.146 Carica papaya HOM05D001685 ORTHO05D007488 1.8e-48 197.2 154 68.8
TPR.G35520 Trifolium pratense HOM05D001685 ORTHO05D007488 1.8e-48 197.2 331 45.0
SEGI_37784 Sequoiadendron giganteum HOM05D001685 ORTHO05D007488 5.2e-48 195.7 174 61.5
AUR62042645 Chenopodium quinoa HOM05D001685 ORTHO05D007488 1.3e-46 191.0 234 50.9
Mapoly0136s0003 Marchantia polymorpha HOM05D001685 ORTHO05D007488 3.3e-42 176.4 162 58.0
Pp3c7_19740 Physcomitrium patens HOM05D001685 ORTHO05D007488 2.1e-41 173.7 225 49.8
CSS0050121 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 4.0e-40 169.5 153 64.7
CSS0033523 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 1.2e-39 167.9 154 64.3
AagrBONN_evm.TU.Sc2ySwM_368.2660 Anthoceros agrestis HOM05D001685 ORTHO05D007488 2.2e-38 163.7 167 52.7
CBR_g24048 Chara braunii HOM05D001685 ORTHO05D007488 4.9e-38 162.5 192 51.0
BcaC03g13609 Brassica carinata HOM05D001685 ORTHO05D007488 7.1e-37 158.7 350 36.9
SMO169G0319 Selaginella moellendorffii HOM05D001685 ORTHO05D007488 1.6e-36 157.5 154 56.5
Glyma.15G095700 Glycine max HOM05D001685 ORTHO05D007488 2.7e-36 156.8 245 48.2
FAN22G0503 Fragaria x ananassa HOM05D001685 ORTHO05D007488 4.6e-36 156.0 352 40.1
GSVIVG01017775001 Vitis vinifera HOM05D001685 ORTHO05D007488 7.3e-34 148.7 128 63.3
MCO11G224 Micromonas commoda HOM05D001685 ORTHO05D007488 2.4e-29 133.7 154 48.7
Cre10.g433100 Chlamydomonas reinhardtii HOM05D001685 ORTHO05D007488 4.6e-28 129.4 187 44.4
AL9U11240 Arabidopsis lyrata HOM05D001685 ORTHO05D007488 1.3e-27 127.9 157 51.6
AL9U11270 Arabidopsis lyrata HOM05D001685 ORTHO05D007488 8.7e-27 125.2 157 51.0
Gohir.D10G168700 Gossypium hirsutum HOM05D001685 ORTHO05D007488 1.5e-26 124.4 75 85.3
PRCOL_00003567 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 1.9e-26 124.0 180 45.0
Lj3C814G4 Lonicera japonica HOM05D001685 ORTHO05D007488 7.3e-26 122.1 128 55.5
Ah.07g200810 Amaranthus hybridus HOM05D001685 ORTHO05D007488 1.3e-19 101.3 58 84.5
Cfa024527 Carpinus fangiana HOM05D001685 ORTHO05D122472 1.0e-06 58.5 94 39.4


User provided reference genes

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