Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 3.7e-51 204.9 131 100.0
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 4.4e-36 154.8 120 65.8
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 3.2e-34 148.7 118 65.3
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 4.2e-34 148.3 127 78.7
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.6e-30 136.3 130 59.2
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 9.0e-29 130.6 129 61.2
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.5e-28 129.8 137 73.0
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 2.6e-28 129.0 132 55.3
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 2.6e-28 129.0 126 64.3
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 3.4e-28 128.6 118 67.8
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 1.3e-27 126.7 128 49.2
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 2.2e-27 125.9 120 59.2
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 2.2e-27 125.9 118 66.1
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 3.8e-27 125.2 127 57.5
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 4.9e-27 124.8 120 63.3
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 8.4e-27 124.0 120 56.7
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 1.1e-26 123.6 118 56.8
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 1.1e-26 123.6 121 62.8
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 1.4e-26 123.2 124 51.6
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 1.4e-26 123.2 127 56.7
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 2.4e-26 122.5 123 51.2
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 2.4e-26 122.5 132 53.0
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 2.4e-26 122.5 120 63.3
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 3.2e-26 122.1 124 73.4
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 3.2e-26 122.1 127 59.8
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 4.2e-26 121.7 118 61.9
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 4.2e-26 121.7 122 67.2
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 5.5e-26 121.3 122 52.5
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 5.5e-26 121.3 121 52.9
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 7.1e-26 120.9 125 50.4
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 7.1e-26 120.9 114 74.6
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 9.3e-26 120.6 120 52.5
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 9.3e-26 120.6 133 50.4
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 9.3e-26 120.6 115 63.5
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 1.2e-25 120.2 131 53.4
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 1.6e-25 119.8 128 50.0
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 1.6e-25 119.8 122 55.7
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 1.6e-25 119.8 122 51.6
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 1.6e-25 119.8 122 51.6
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 1.6e-25 119.8 122 51.6
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 1.6e-25 119.8 120 55.0
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 1.6e-25 119.8 119 61.3
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.6e-25 119.8 120 62.5
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 1.6e-25 119.8 120 62.5
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 2.1e-25 119.4 124 69.4
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 2.1e-25 119.4 120 54.2
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 2.7e-25 119.0 114 53.5
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 2.7e-25 119.0 116 75.0
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 3.5e-25 118.6 125 52.0
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 4.6e-25 118.2 122 51.6
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 4.6e-25 118.2 121 62.8
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 4.6e-25 118.2 129 58.9
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 4.6e-25 118.2 114 54.4
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 4.6e-25 118.2 122 63.9
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 6.0e-25 117.9 122 51.6
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 6.0e-25 117.9 117 72.6
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 6.0e-25 117.9 119 55.5
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 6.0e-25 117.9 127 64.6
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 7.9e-25 117.5 122 51.6
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 7.9e-25 117.5 115 54.8
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 7.9e-25 117.5 115 62.6
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 1.0e-24 117.1 130 48.5
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 1.0e-24 117.1 117 55.6
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.3e-24 116.7 123 52.0
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 1.8e-24 116.3 114 51.8
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 1.8e-24 116.3 114 54.4
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 1.8e-24 116.3 118 53.4
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.8e-24 116.3 115 62.6
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 2.3e-24 115.9 119 53.8
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 2.3e-24 115.9 118 54.2
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 3.0e-24 115.5 122 49.2
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 3.0e-24 115.5 119 55.5
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 3.0e-24 115.5 122 52.5
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 3.9e-24 115.2 119 52.1
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 3.9e-24 115.2 121 52.1
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 3.9e-24 115.2 123 52.0
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 5.1e-24 114.8 119 52.1
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 5.1e-24 114.8 161 42.9
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 5.1e-24 114.8 119 54.6
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 6.7e-24 114.4 122 49.2
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 6.7e-24 114.4 117 54.7
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 6.7e-24 114.4 118 53.4
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 8.7e-24 114.0 135 55.6
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 8.7e-24 114.0 114 66.7
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 8.7e-24 114.0 125 64.8
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 8.7e-24 114.0 123 61.8
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 1.1e-23 113.6 122 50.0
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 1.1e-23 113.6 130 47.7
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 1.5e-23 113.2 132 48.5
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 1.5e-23 113.2 161 41.6
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 1.5e-23 113.2 123 56.9
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 1.9e-23 112.8 117 51.3
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 2.5e-23 112.5 122 49.2
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 2.5e-23 112.5 127 63.0
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 2.5e-23 112.5 122 48.4
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 3.3e-23 112.1 117 50.4
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 3.3e-23 112.1 129 48.8
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 3.3e-23 112.1 121 57.9
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 4.3e-23 111.7 118 62.7
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 4.3e-23 111.7 120 57.5
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 5.6e-23 111.3 124 47.6
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 5.6e-23 111.3 118 50.8
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 7.4e-23 110.9 118 50.0
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 9.6e-23 110.5 114 50.0
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 9.6e-23 110.5 119 49.6
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 1.3e-22 110.2 134 54.5
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 1.6e-22 109.8 142 64.1
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 2.8e-22 109.0 136 48.5
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 2.8e-22 109.0 108 50.0
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 2.8e-22 109.0 117 47.0
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 2.8e-22 109.0 131 55.7
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 4.8e-22 108.2 123 50.4
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 6.2e-22 107.8 140 61.4
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 6.2e-22 107.8 140 61.4
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.1e-21 107.1 127 59.8
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 1.4e-21 106.7 113 48.7
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 1.8e-21 106.3 134 44.8
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 3.1e-21 105.5 111 50.5
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 3.1e-21 105.5 118 48.3
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 5.3e-21 104.8 140 60.7
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 5.3e-21 104.8 112 50.0
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 9.0e-21 104.0 124 71.8
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 1.2e-20 103.6 125 46.4
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 1.2e-20 103.6 140 45.0
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 2.0e-20 102.8 156 52.6
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 2.6e-20 102.4 118 48.3
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 3.4e-20 102.1 117 62.4
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 4.5e-20 101.7 125 46.4
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 5.8e-20 101.3 159 44.0
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 7.6e-20 100.9 108 51.9
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 7.6e-20 100.9 136 42.6
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 1.1e-18 97.1 119 46.2
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 2.5e-18 95.9 109 45.0
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 2.5e-18 95.9 59 72.9
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 5.5e-18 94.7 125 44.0
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 7.1e-18 94.4 136 40.4
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 9.3e-18 94.0 140 55.0
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 1.2e-17 93.6 46 84.8
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 2.1e-17 92.8 115 43.5
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 2.7e-17 92.4 51 76.5
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 6.0e-17 91.3 127 43.3
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 3.9e-16 88.6 49 77.6
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 3.3e-15 85.5 51 72.5
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 5.7e-15 84.7 50 68.0
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 2.1e-14 82.8 155 35.5
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 1.1e-13 80.5 51 62.7
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 1.5e-12 76.6 51 60.8
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 3.4e-12 75.5 100 61.0
Peaxi162Scf00200g00182 Petunia axillaris HOM05D004757 ORTHO05D005743 1.4e-10 70.1 48 66.7
Peaxi162Scf00627g00011 Petunia axillaris HOM05D004757 ORTHO05D005743 2.3e-08 62.8 28 92.9


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