Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 4.3e-61 238.0 142 100.0
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 3.6e-39 165.2 140 72.1
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 3.0e-38 162.2 134 72.4
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 5.2e-38 161.4 135 72.6
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 3.3e-37 158.7 135 70.4
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 1.4e-35 153.3 138 73.2
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 7.7e-34 147.5 138 73.2
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 8.5e-33 144.1 140 70.7
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.5e-32 143.3 141 68.8
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 1.5e-32 143.3 135 68.9
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 2.5e-32 142.5 141 66.7
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 2.5e-32 142.5 133 70.7
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 5.5e-32 141.4 135 66.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 7.2e-32 141.0 141 70.2
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 2.1e-31 139.4 135 68.1
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 3.6e-31 138.7 134 70.9
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 1.4e-30 136.7 132 65.2
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 2.3e-30 136.0 139 61.9
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 5.2e-30 134.8 138 63.8
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 8.8e-30 134.0 139 61.2
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 1.2e-29 133.7 133 66.2
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 1.5e-29 133.3 135 63.7
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 1.5e-29 133.3 135 65.9
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 2.6e-29 132.5 133 64.7
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 4.4e-29 131.7 137 62.0
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 7.5e-29 131.0 135 65.2
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 7.5e-29 131.0 135 65.2
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 2.8e-28 129.0 135 64.4
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 3.7e-28 128.6 137 65.0
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 4.8e-28 128.3 142 63.4
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 4.8e-28 128.3 135 62.2
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 6.3e-28 127.9 135 65.2
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 6.3e-28 127.9 135 67.4
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 6.3e-28 127.9 132 62.1
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 8.2e-28 127.5 138 61.6
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.4e-27 126.7 137 59.1
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 1.8e-27 126.3 138 61.6
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 1.8e-27 126.3 142 64.1
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.4e-27 125.9 140 63.6
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 4.1e-27 125.2 139 64.7
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 7.0e-27 124.4 140 62.9
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 9.1e-27 124.0 139 62.6
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 9.1e-27 124.0 139 62.6
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 1.6e-26 123.2 132 63.6
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 1.6e-26 123.2 132 63.6
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.6e-26 123.2 132 64.4
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 2.0e-26 122.9 140 63.6
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 2.7e-26 122.5 135 63.7
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 5.9e-26 121.3 134 61.2
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 5.9e-26 121.3 129 62.0
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 5.9e-26 121.3 134 65.7
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 5.9e-26 121.3 138 64.5
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 7.7e-26 120.9 143 60.8
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 2.2e-25 119.4 135 63.7
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 3.8e-25 118.6 131 66.4
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 3.8e-25 118.6 132 63.6
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 3.8e-25 118.6 135 62.2
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 1.9e-24 116.3 132 62.9
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 2.5e-24 115.9 135 63.7
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 4.2e-24 115.2 143 61.5
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 6.1e-23 111.3 133 57.9
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 8.0e-23 110.9 132 61.4
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 1.0e-22 110.5 143 58.7
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 1.0e-22 110.5 143 58.7
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 1.0e-22 110.5 137 59.1
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 2.3e-22 109.4 135 60.0
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 2.3e-22 109.4 135 60.0
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 3.0e-22 109.0 132 61.4
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 4.0e-22 108.6 141 60.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 2.6e-21 105.9 135 59.3
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 9.8e-21 104.0 133 57.9
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 9.8e-21 104.0 140 58.6
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 1.3e-20 103.6 140 58.6
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 1.7e-20 103.2 142 54.9
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 2.8e-20 102.4 135 57.8
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 1.8e-19 99.8 106 65.1
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 2.4e-19 99.4 96 75.0
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 5.4e-19 98.2 166 50.0
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 3.5e-18 95.5 117 57.3
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.7e-17 93.2 159 50.9
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 1.7e-17 93.2 136 55.9
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 3.8e-17 92.0 137 55.5
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 1.1e-16 90.5 138 52.9
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 5.5e-16 88.2 137 51.8
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 9.5e-16 87.4 116 63.8
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.2e-15 87.0 100 68.0
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 1.6e-15 86.7 136 52.9
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 2.1e-15 86.3 93 65.6
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 1.0e-14 84.0 134 53.0
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 5.2e-14 81.6 126 54.0
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 8.9e-14 80.9 92 64.1
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 9.8e-13 77.4 93 57.0
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 8.3e-12 74.3 98 62.2
MD11G1234100 Malus domestica HOM05D007581 ORTHO05D009250 1.3e-09 67.0 55 54.5
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 6.6e-09 64.7 60 55.0
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 3.3e-08 62.4 131 49.6
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 9.5e-08 60.8 96 59.4
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.6e-07 60.1 132 34.1
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 2.1e-07 59.7 32 84.4
AagrBONN_evm.TU.Sc2ySwM_344.1812 Anthoceros agrestis HOM05D020710 ORTHO05D009250 8.0e-07 57.8 137 44.5
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 1.0e-06 57.4 102 56.9
SMO358G0598 Selaginella moellendorffii HOM05D020710 ORTHO05D030470 4.0e-06 55.5 133 44.4


User provided reference genes

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