Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 1.2e-25 119.0 56 100.0
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 4.4e-17 90.5 51 78.4
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 9.8e-17 89.4 54 70.4
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 1.7e-16 88.6 48 79.2
MSTRG.27254 Avicennia marina HOM05D007120 ORTHO05D008881 2.9e-16 87.8 52 75.0
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 2.9e-16 87.8 51 72.5
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 3.7e-16 87.4 50 70.0
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 3.7e-16 87.4 47 83.0
Cfa001199 Carpinus fangiana HOM05D007120 ORTHO05D008881 6.4e-16 86.7 51 72.5
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 6.4e-16 86.7 50 72.0
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 6.4e-16 86.7 50 72.0
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 8.3e-16 86.3 47 76.6
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 1.1e-15 85.9 51 74.5
HanXRQChr02g0048061 Helianthus annuus HOM05D007120 ORTHO05D008881 1.1e-15 85.9 55 72.7
HanXRQChr10g0312991 Helianthus annuus HOM05D007120 ORTHO05D008881 1.4e-15 85.5 49 73.5
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 1.4e-15 85.5 48 77.1
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.4e-15 84.7 54 64.8
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 3.2e-15 84.3 48 77.1
Aqoxy4G03269 Aquilegia oxysepala HOM05D007120 ORTHO05D008881 4.1e-15 84.0 50 80.0
FAN03G2745 Fragaria x ananassa HOM05D007120 ORTHO05D008881 4.1e-15 84.0 50 70.0
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 4.1e-15 84.0 58 67.2
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 4.1e-15 84.0 58 67.2
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 5.4e-15 83.6 54 66.7
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 5.4e-15 83.6 54 66.7
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 5.4e-15 83.6 54 66.7
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 7.0e-15 83.2 54 70.4
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 7.0e-15 83.2 53 73.6
Nitab4.5_0000171g0210 Nicotiana tabacum HOM05D007120 ORTHO05D008881 9.2e-15 82.8 51 70.6
FvH4_7g26050 Fragaria vesca HOM05D007120 ORTHO05D008881 1.2e-14 82.4 50 68.0
FAN10G2835 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.2e-14 82.4 50 68.0
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 1.2e-14 82.4 51 66.7
GSVIVG01032659001 Vitis vinifera HOM05D007120 ORTHO05D008881 1.6e-14 82.0 48 72.9
Atru.chr12.199 Acer truncatum HOM05D007120 ORTHO05D008881 2.7e-14 81.3 49 65.3
Cfa011840 Carpinus fangiana HOM05D007120 ORTHO05D008881 3.5e-14 80.9 51 68.6
Os07g0680300 Oryza sativa ssp. japonica HOM05D007120 ORTHO05D008881 4.6e-14 80.5 51 68.6
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 7.8e-14 79.7 54 63.0
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 7.8e-14 79.7 52 67.3
MBI15_g39383_MAGBIO Magnolia biondii HOM05D007120 ORTHO05D008881 1.0e-13 79.3 48 75.0
PGSC0003DMG400020601 Solanum tuberosum HOM05D007120 ORTHO05D008881 1.3e-13 79.0 51 66.7
CAN.G1229.12 Capsicum annuum HOM05D007120 ORTHO05D008881 1.7e-13 78.6 51 68.6
Lsat_1_v5_gn_6_11060 Lactuca sativa HOM05D007120 ORTHO05D008881 2.3e-13 78.2 54 68.5
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 3.0e-13 77.8 51 62.7
Solyc03g095730.4 Solanum lycopersicum HOM05D007120 ORTHO05D008881 3.9e-13 77.4 51 66.7
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 5.0e-13 77.0 54 61.1
Nitab4.5_0000375g0220 Nicotiana tabacum HOM05D007120 ORTHO05D008881 5.0e-13 77.0 68 57.4
Hund13439 Selenicereus undatus HOM05D007120 ORTHO05D008881 6.6e-13 76.6 54 59.3
Prupe.2G265200 Prunus persica HOM05D007120 ORTHO05D008881 1.5e-12 75.5 54 61.1
Migut.F00570 Erythranthe guttata HOM05D007120 ORTHO05D008881 1.9e-12 75.1 48 66.7
Sp4g23080 Schrenkiella parvula HOM05D007120 ORTHO05D008881 1.9e-12 75.1 53 64.2
MD03G1050700 Malus domestica HOM05D007120 ORTHO05D008881 2.5e-12 74.7 53 64.2
CANSAT56G4069 Cannabis sativa HOM05D007120 ORTHO05D008881 5.6e-12 73.6 54 63.0
Dinv34497 Davidia involucrata HOM05D006907 ORTHO05D008598 5.6e-12 73.6 43 74.4
BcaB01g03516 Brassica carinata HOM05D007120 ORTHO05D008881 9.5e-12 72.8 53 62.3
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 9.5e-12 72.8 39 79.5
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 9.5e-12 72.8 39 79.5
A04p31140 Brassica napus HOM05D007120 ORTHO05D008881 1.2e-11 72.4 53 60.4
C04p68540 Brassica napus HOM05D007120 ORTHO05D008881 1.2e-11 72.4 53 60.4
BolC4t28353H Brassica oleracea HOM05D007120 ORTHO05D008881 1.2e-11 72.4 53 60.4
BraA04t18569Z Brassica rapa HOM05D007120 ORTHO05D008881 1.2e-11 72.4 53 60.4
FAN01G0895 Fragaria x ananassa HOM05D007120 ORTHO05D008881 2.8e-11 71.2 67 50.7
Nitab4.5_0011372g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 2.8e-11 71.2 91 44.0
A03p22930 Brassica napus HOM05D007120 ORTHO05D008881 6.2e-11 70.1 51 62.7
BolC3t15101H Brassica oleracea HOM05D007120 ORTHO05D008881 6.2e-11 70.1 51 62.7
BraA03t11516Z Brassica rapa HOM05D007120 ORTHO05D008881 6.2e-11 70.1 51 62.7
Prupe.6G040200 Prunus persica HOM05D007120 ORTHO05D008881 8.0e-11 69.7 39 69.2
FAN11G0923 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.8e-10 68.6 39 74.4
FAN21G2234 Fragaria x ananassa HOM05D007120 ORTHO05D008881 3.1e-10 67.8 51 62.7
ATR1127G135 Amborella trichopoda HOM05D007120 ORTHO05D008881 6.8e-10 66.6 54 57.4
CiPaw.09G151000 Carya illinoinensis HOM05D007120 ORTHO05D008881 6.8e-10 66.6 51 52.9
Thhalv10017507m.g Eutrema salsugineum HOM05D007120 ORTHO05D008881 1.2e-09 65.9 38 71.1
BcaC02g12732 Brassica carinata HOM05D007120 ORTHO05D008881 3.4e-09 64.3 38 71.1
A05p01890 Brassica napus HOM05D007120 ORTHO05D008881 3.4e-09 64.3 38 71.1
C01p26040 Brassica napus HOM05D007120 ORTHO05D008881 4.4e-09 63.9 38 71.1
C04p02230 Brassica napus HOM05D007120 ORTHO05D008881 4.4e-09 63.9 38 71.1
BolC4t21869H Brassica oleracea HOM05D007120 ORTHO05D008881 4.4e-09 63.9 38 71.1
C04p16380 Brassica napus HOM05D007120 ORTHO05D008881 9.8e-09 62.8 37 70.3
CARHR135860 Cardamine hirsuta HOM05D007120 ORTHO05D008881 9.8e-09 62.8 51 54.9
Carub.0004s2306 Capsella rubella HOM05D007120 ORTHO05D008881 1.7e-08 62.0 54 55.6
Phvul.009G043000 Phaseolus vulgaris HOM05D007120 ORTHO05D008881 2.9e-08 61.2 39 66.7
CsaV3_6G002350 Cucumis sativus L. HOM05D007120 ORTHO05D008881 3.7e-08 60.8 47 66.0
Glyma.06G141900 Glycine max HOM05D007120 ORTHO05D008881 4.9e-08 60.5 39 64.1
C01p18970 Brassica napus HOM05D007120 ORTHO05D008881 6.4e-08 60.1 39 69.2
CBR_g11002 Chara braunii HOM05D007120 ORTHO05D008881 6.4e-08 60.1 55 45.5
Nitab4.5_0012297g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 6.4e-08 60.1 35 74.3
MELO3C020013.2 Cucumis melo HOM05D007120 ORTHO05D008881 1.1e-07 59.3 56 58.9
Glyma.04G223400 Glycine max HOM05D007120 ORTHO05D008881 1.1e-07 59.3 39 64.1
AL4G38650 Arabidopsis lyrata HOM05D007120 ORTHO05D008881 1.4e-07 58.9 37 64.9
AT2G40765 Arabidopsis thaliana HOM05D007120 ORTHO05D008881 1.4e-07 58.9 37 64.9
COL.COLO4_19468 Corchorus olitorius HOM05D007120 ORTHO05D008881 1.4e-07 58.9 39 66.7
Sc11g0006040 Simmondsia chinensis HOM05D007120 ORTHO05D008881 1.4e-07 58.9 37 70.3
CiPaw.13G063000 Carya illinoinensis HOM05D007120 ORTHO05D008881 3.2e-07 57.8 51 52.9
ClCG11G005640 Citrullus lanatus HOM05D007120 ORTHO05D008881 3.2e-07 57.8 41 70.7
Lj1g0003388 Lotus japonicus HOM05D007120 ORTHO05D008881 3.2e-07 57.8 39 61.5
Lalb_Chr11g0067731 Lupinus albus HOM05D007120 ORTHO05D008881 3.2e-07 57.8 39 61.5
Peaxi162Scf00184g00003 Petunia axillaris HOM05D007120 ORTHO05D008881 3.2e-07 57.8 35 71.4
DCAR_014662 Daucus carota HOM05D007120 ORTHO05D008881 4.1e-07 57.4 39 64.1
Sopen07g008940 Solanum pennellii HOM05D007120 ORTHO05D008881 4.1e-07 57.4 34 73.5
TAR633G1173 Trochodendron aralioides HOM05D009315 ORTHO05D008839 7.0e-07 56.6 36 69.4
FAN06G1351 Fragaria x ananassa HOM05D007120 ORTHO05D008881 9.2e-07 56.2 28 75.0
Medtr3g093810 Medicago truncatula HOM05D007120 ORTHO05D008881 9.2e-07 56.2 39 61.5
Lalb_Chr23g0272151 Lupinus albus HOM05D007120 ORTHO05D008881 1.2e-06 55.8 39 59.0
HPP92_000774 Vanilla planifolia HOM05D007120 ORTHO05D008881 1.6e-06 55.5 38 60.5
HPP92_026799 Vanilla planifolia HOM05D007120 ORTHO05D008881 1.6e-06 55.5 38 60.5
EL10Ac2g02666 Beta vulgaris HOM05D007120 ORTHO05D008881 4.6e-06 53.9 42 57.1
DCAR_018042 Daucus carota HOM05D007120 ORTHO05D008881 6.0e-06 53.5 40 50.0
CsaV3_5G011100 Cucumis sativus L. HOM05D007120 ORTHO05D008881 7.8e-06 53.1 44 54.5
Lalb_Chr08g0239241 Lupinus albus HOM05D007120 ORTHO05D008881 7.8e-06 53.1 39 53.8


User provided reference genes

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