Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.3e-103 379.0 212 100.0
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 3.9e-82 308.5 212 73.1
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 6.9e-79 297.7 213 75.1
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.5e-78 296.6 217 74.2
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 1.1e-76 290.4 216 71.3
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 2.7e-75 285.8 214 70.6
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 4.3e-73 278.5 179 77.1
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 6.2e-72 274.6 201 71.6
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 4.3e-65 251.9 218 62.8
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 9.0e-63 244.2 223 61.9
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 5.8e-62 241.5 222 60.4
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.7e-61 240.0 217 65.0
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.9e-60 236.5 214 60.3
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 1.0e-58 230.7 219 58.9
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 1.5e-57 226.9 173 71.7
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.5e-57 226.9 215 59.1
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 9.7e-57 224.2 214 58.9
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 1.6e-56 223.4 226 56.2
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 2.2e-56 223.0 251 53.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 4.8e-56 221.9 217 57.6
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 1.8e-55 219.9 175 72.6
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 3.1e-55 219.2 198 61.6
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 3.1e-55 219.2 210 62.4
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 4.1e-55 218.8 219 57.1
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 6.9e-55 218.0 220 61.4
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 1.5e-54 216.9 220 62.7
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 2.6e-54 216.1 173 63.6
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 1.0e-53 214.2 214 61.7
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 1.7e-53 213.4 215 61.9
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 2.2e-53 213.0 220 59.1
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 6.5e-53 211.5 220 60.0
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 8.5e-53 211.1 217 56.7
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.5e-52 209.5 217 54.8
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 4.2e-52 208.8 221 56.6
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 4.2e-52 208.8 184 64.1
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 5.5e-52 208.4 220 55.0
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 9.4e-52 207.6 201 59.2
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 2.7e-51 206.1 170 62.9
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 3.6e-51 205.7 212 59.4
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 3.6e-51 205.7 211 57.3
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 7.9e-51 204.5 207 55.6
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 2.3e-50 203.0 197 61.4
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.3e-50 203.0 214 54.2
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 6.7e-50 201.4 171 67.8
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 6.7e-50 201.4 167 67.7
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 8.8e-50 201.1 213 53.5
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 2.0e-49 199.9 183 62.8
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 2.0e-49 199.9 216 58.3
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 3.3e-49 199.1 217 53.9
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 5.7e-49 198.4 222 57.2
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.7e-48 196.8 124 82.3
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 2.8e-48 196.1 171 60.8
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 3.7e-48 195.7 214 53.3
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 4.8e-48 195.3 214 52.8
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 4.8e-48 195.3 214 52.8
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 4.8e-48 195.3 178 63.5
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 1.4e-47 193.7 172 63.4
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 4.1e-47 192.2 213 54.5
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 1.2e-46 190.7 222 56.3
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 5.9e-46 188.3 141 67.4
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 5.9e-46 188.3 141 67.4
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 7.7e-46 188.0 174 63.2
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 7.7e-46 188.0 179 55.9
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.3e-45 187.2 174 63.2
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 2.2e-45 186.4 116 83.6
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 3.8e-45 185.7 212 51.4
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 2.5e-44 183.0 174 60.9
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.4e-42 177.2 170 62.4
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 8.8e-42 174.5 194 51.5
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 2.0e-41 173.3 196 51.5
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 2.0e-41 173.3 194 53.1
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 2.0e-41 173.3 194 53.1
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 2.0e-41 173.3 188 53.2
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 3.3e-41 172.6 179 54.7
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.7e-41 171.8 167 56.9
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 7.4e-41 171.4 192 51.6
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.3e-40 170.6 164 57.3
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 1.3e-40 170.6 96 82.3
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.7e-40 170.2 109 73.4
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 2.2e-40 169.9 168 54.8
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 3.7e-40 169.1 192 51.0
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.7e-40 169.1 164 56.7
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 3.7e-40 169.1 165 55.8
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 8.2e-40 167.9 126 68.3
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.8e-39 166.8 164 56.1
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.1e-39 166.0 171 55.6
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 5.3e-39 165.2 192 50.5
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 5.3e-39 165.2 192 50.5
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.2e-38 164.1 91 79.1
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 2.0e-38 163.3 168 54.8
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 2.9e-37 159.5 172 51.2
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 8.5e-37 157.9 100 72.0
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 1.9e-36 156.8 127 60.6
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 5.5e-36 155.2 111 63.1
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 6.7e-34 148.3 107 72.9
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 8.8e-34 147.9 112 66.1
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 4.8e-32 142.1 226 38.5
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.4e-31 139.8 78 83.3
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 1.7e-29 133.7 146 56.2
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 8.5e-29 131.3 221 43.4
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 1.9e-28 130.2 153 52.3
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 9.4e-28 127.9 184 41.3
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 4.0e-26 122.5 146 52.7
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 8.8e-26 121.3 122 53.3
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 3.1e-23 112.8 91 56.0
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 2.7e-22 109.8 107 43.9
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 2.9e-21 106.3 81 56.8
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.6e-19 100.5 105 47.6
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 2.1e-19 100.1 67 82.1
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 8.0e-19 98.2 116 44.8
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 6.8e-18 95.1 159 39.0
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 4.4e-17 92.4 73 64.4
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 2.9e-13 79.7 105 41.0
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 7.3e-12 75.1 135 43.7
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 7.8e-06 55.1 89 41.6


User provided reference genes

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