Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 7.4e-62 240.4 120 100.0
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.5e-46 189.5 94 100.0
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.5e-38 162.9 88 93.2
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 2.0e-38 162.5 104 77.9
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 7.4e-38 160.6 108 76.9
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 3.1e-36 155.2 108 71.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 1.5e-35 152.9 94 79.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.0e-34 150.2 94 78.7
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.0e-34 150.2 93 77.4
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.3e-34 149.8 94 78.7
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.2e-34 149.1 108 69.4
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.9e-34 148.7 90 78.9
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.9e-34 148.7 90 78.9
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.8e-34 148.3 94 75.5
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 3.8e-34 148.3 90 77.8
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 6.5e-34 147.5 94 75.5
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 8.5e-34 147.1 92 76.1
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.9e-33 146.0 92 76.1
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 2.5e-33 145.6 94 76.6
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 7.2e-33 144.1 106 67.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.2e-32 143.3 90 75.6
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.2e-32 143.3 104 69.2
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.7e-32 142.1 91 75.8
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.7e-32 142.1 102 69.6
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 3.6e-32 141.7 92 75.0
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 3.6e-32 141.7 105 67.6
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 6.1e-32 141.0 94 74.5
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 6.1e-32 141.0 91 74.7
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 8.0e-32 140.6 92 71.7
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 1.0e-31 140.2 108 67.6
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 3.0e-31 138.7 92 72.8
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 3.9e-31 138.3 94 73.4
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.9e-31 138.3 90 75.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 5.2e-31 137.9 94 70.2
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 6.7e-31 137.5 89 75.3
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 6.7e-31 137.5 88 73.9
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 8.8e-31 137.1 93 73.1
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.0e-30 136.0 90 74.4
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 2.6e-30 135.6 92 72.8
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.6e-30 135.6 88 76.1
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 4.4e-30 134.8 90 74.4
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 5.7e-30 134.4 89 78.7
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 7.4e-30 134.0 94 67.0
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 7.4e-30 134.0 108 61.1
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 9.7e-30 133.7 92 69.6
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 9.7e-30 133.7 91 70.3
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.3e-29 133.3 94 69.1
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.7e-29 132.9 79 82.3
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.7e-29 132.9 94 69.1
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.7e-29 132.9 94 69.1
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 2.2e-29 132.5 94 70.2
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.2e-29 132.5 93 68.8
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 2.2e-29 132.5 93 69.9
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.8e-29 132.1 90 68.9
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.7e-29 131.7 90 66.7
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 4.8e-29 131.3 94 70.2
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 4.8e-29 131.3 92 71.7
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 6.3e-29 131.0 105 61.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.1e-28 130.2 89 69.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.4e-28 129.0 93 66.7
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 3.1e-28 128.6 91 69.2
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 4.1e-28 128.3 90 66.7
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.3e-28 127.9 90 67.8
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 7.0e-28 127.5 92 66.3
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 7.0e-28 127.5 91 62.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 9.1e-28 127.1 91 63.7
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 9.1e-28 127.1 94 64.9
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 9.1e-28 127.1 104 62.5
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.2e-27 126.7 93 66.7
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.2e-27 126.7 89 66.3
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.2e-27 126.7 90 68.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.6e-27 126.3 101 64.4
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.0e-27 125.9 91 63.7
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 3.5e-27 125.2 90 66.7
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 3.5e-27 125.2 84 75.0
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.9e-27 124.4 101 64.4
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 7.7e-27 124.0 90 63.3
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 7.7e-27 124.0 91 61.5
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.3e-26 123.2 108 61.1
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 1.3e-26 123.2 96 67.7
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 1.7e-26 122.9 90 63.3
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.7e-26 122.9 93 64.5
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.7e-26 122.9 89 64.0
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.7e-26 122.9 101 63.4
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.2e-26 122.5 90 63.3
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 3.8e-26 121.7 93 63.4
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 5.0e-26 121.3 90 62.2
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 8.5e-26 120.6 86 66.3
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.5e-25 119.8 90 62.2
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.5e-25 119.8 90 62.2
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 4.2e-25 118.2 88 62.5
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 4.2e-25 118.2 88 65.9
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 4.2e-25 118.2 89 62.9
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 9.4e-25 117.1 90 61.1
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.2e-24 116.7 90 64.4
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 3.6e-24 115.2 89 62.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.0e-23 113.6 90 61.1
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.0e-23 112.1 119 51.3
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 8.8e-23 110.5 105 51.4
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.2e-22 110.2 105 51.4
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 7.0e-20 100.9 102 50.0
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.2e-18 95.9 69 66.7
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 8.5e-18 94.0 68 64.7
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 3.2e-17 92.0 88 52.3
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 5.5e-17 91.3 90 44.4
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 5.5e-17 91.3 71 62.0
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 6.1e-16 87.8 70 64.3
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 2.7e-11 72.4 65 52.3
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 2.7e-11 72.4 52 71.2
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.7e-11 72.4 58 65.5


User provided reference genes

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