Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 3.7e-263 911.0 460 100.0
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 2.5e-211 738.8 462 79.7
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.3e-210 736.5 458 80.8
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.1e-209 733.4 449 83.1
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 3.1e-209 731.9 452 79.9
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 1.7e-207 726.1 449 80.6
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 1.1e-206 723.4 448 80.1
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 1.4e-206 723.0 452 79.4
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 3.2e-206 721.8 449 78.8
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 3.9e-204 714.9 446 77.4
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 3.9e-204 714.9 458 77.3
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.9e-203 712.6 453 76.8
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 4.3e-203 711.4 461 77.7
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 5.7e-203 711.1 454 77.5
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 5.7e-203 711.1 450 77.3
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 7.4e-203 710.7 451 77.2
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 9.6e-203 710.3 446 76.9
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 1.6e-202 709.5 450 78.2
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 2.8e-202 708.8 471 75.8
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 3.7e-202 708.4 461 75.9
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 3.7e-202 708.4 458 76.6
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.4e-201 706.4 461 76.1
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 1.8e-201 706.1 449 77.1
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 4.1e-201 704.9 458 76.0
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 5.3e-201 704.5 462 76.6
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 7.6e-200 700.7 453 76.2
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 7.6e-200 700.7 459 76.7
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 5.0e-199 698.0 448 76.6
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 6.5e-199 697.6 454 76.2
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 6.5e-199 697.6 450 76.2
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 2.5e-198 695.7 461 76.1
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.5e-198 694.5 461 73.8
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 5.5e-198 694.5 460 75.2
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 1.6e-197 693.0 459 75.6
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 2.1e-197 692.6 449 74.6
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 2.7e-197 692.2 461 73.5
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 2.7e-197 692.2 461 74.4
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 3.6e-197 691.8 459 76.3
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 7.9e-197 690.6 447 75.4
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.0e-196 690.3 459 75.2
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 3.0e-196 688.7 447 75.6
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.9e-196 688.3 461 73.3
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 6.7e-196 687.6 460 74.3
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.7e-196 687.6 460 72.8
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 8.7e-196 687.2 397 81.1
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.1e-195 686.8 448 76.8
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 7.4e-195 684.1 450 74.9
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 9.7e-195 683.7 400 80.8
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 1.6e-194 682.9 460 73.5
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 4.8e-194 681.4 447 74.0
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 4.8e-194 681.4 397 81.4
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 4.8e-194 681.4 476 74.4
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 8.2e-194 680.6 462 74.7
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 1.4e-193 679.9 447 74.5
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.2e-192 676.8 455 74.1
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 3.4e-192 675.2 460 73.7
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 4.5e-192 674.9 466 72.5
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 7.7e-192 674.1 446 74.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 5.0e-191 671.4 445 73.9
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 8.5e-191 670.6 380 84.2
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 8.5e-191 670.6 458 71.6
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 2.5e-190 669.1 459 71.7
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 4.2e-190 668.3 445 73.5
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 7.2e-190 667.5 446 74.2
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 1.0e-188 663.7 450 73.6
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 1.8e-188 662.9 459 71.7
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 8.8e-188 660.6 459 71.0
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.1e-187 660.2 447 73.4
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 1.1e-187 660.2 450 73.3
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.5e-187 659.8 457 72.0
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 6.3e-186 654.4 449 71.7
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 6.3e-186 654.4 447 73.2
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 9.1e-185 650.6 448 72.8
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.5e-184 649.8 496 67.3
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 2.6e-184 649.0 394 82.7
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 3.4e-184 648.7 448 71.9
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 4.5e-184 648.3 445 72.1
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 2.2e-183 646.0 474 69.0
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 5.0e-183 644.8 447 71.4
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.9e-182 642.9 448 71.9
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.9e-182 642.9 448 71.9
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 2.1e-181 639.4 445 71.7
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.8e-180 636.3 445 71.5
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.5e-179 633.3 456 68.4
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.5e-179 633.3 391 76.0
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.0e-175 620.5 412 74.0
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 6.8e-164 581.3 408 66.9
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.4e-161 573.5 396 72.5
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.4e-161 573.5 402 66.7
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.5e-158 562.8 402 66.2
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.6e-149 532.3 456 61.8
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 3.2e-145 519.2 308 82.5
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 6.0e-136 488.4 343 70.0
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 5.6e-134 481.9 449 59.2
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 3.5e-120 436.0 401 55.9
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.3e-119 433.3 394 53.0
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.6e-117 427.2 446 51.1
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 4.7e-117 425.6 398 53.5
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 4.3e-110 402.5 399 50.9
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 9.3e-97 358.2 404 45.0
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.2e-82 310.5 200 76.5
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.3e-71 273.9 190 67.9
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.3e-71 273.9 190 67.9
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 2.0e-70 270.8 187 71.7
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.2e-50 204.1 209 52.6
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.4e-28 131.7 88 77.3
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 1.3e-21 108.6 62 79.0


User provided reference genes

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