Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015246 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-25 117.9 58 100.0
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 1.7e-16 88.6 57 75.4
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 5.0e-16 87.0 57 64.9
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 5.0e-16 87.0 57 64.9
Duzib168G0509 Durio zibethinus HOM05D000002 ORTHO05D000047 5.0e-16 87.0 57 64.9
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 5.0e-16 87.0 57 64.9
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 5.0e-16 87.0 57 64.9
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 1.5e-15 85.5 57 63.2
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 1.5e-15 85.5 57 63.2
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 4.3e-15 84.0 57 63.2
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 4.3e-15 84.0 56 62.5
Hma1.2p1_0147F.1_g065860 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-15 83.6 57 64.9
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 7.3e-15 83.2 56 67.9
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 7.3e-15 83.2 57 64.9
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 1.6e-14 82.0 56 62.5
Cpa.g.sc164.9 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-14 80.9 56 60.7
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 3.6e-14 80.9 57 61.4
HPP92_005717 Vanilla planifolia HOM05D000002 ORTHO05D000047 4.7e-14 80.5 57 63.2
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 4.7e-14 80.5 57 63.2
HPP92_024459 Vanilla planifolia HOM05D000002 ORTHO05D000047 4.7e-14 80.5 57 63.2
Phvul.009G096700 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 8.1e-14 79.7 56 58.9
HPP92_005074 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.1e-13 79.3 57 63.2
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 1.1e-13 79.3 57 63.2
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.4e-13 79.0 57 61.4
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.8e-13 78.6 53 66.0
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 2.3e-13 78.2 57 61.4
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 3.1e-13 77.8 56 57.1
Ca_04068_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 6.8e-13 76.6 55 58.2
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.8e-13 76.6 54 63.0
HPP92_022694 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.8e-13 76.6 54 63.0
CSS0030836 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-12 75.9 57 61.4
HPP92_025431 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.5e-12 75.5 51 64.7
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 1.5e-12 75.5 56 55.4
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 2.0e-12 75.1 56 55.4
CSS0024899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-11 71.2 50 60.0
SHI31190 Sapria himalayana HOM05D000002 ORTHO05D000047 2.9e-11 71.2 55 52.7
Cpa.g.sc12.9 Carica papaya HOM05D000002 ORTHO05D000047 8.3e-11 69.7 55 54.5
VMungo0540G1667 Vigna mungo HOM05D002022 ORTHO05D002056 8.3e-11 69.7 51 52.9
arahy.Tifrunner.gnm1.ann1.CN0JQN Arachis hypogaea HOM05D000002 ORTHO05D000047 1.1e-10 69.3 56 53.6
Eucgr.H02766 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.1e-10 69.3 57 52.6
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.1e-10 69.3 55 52.7
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-10 68.6 55 52.7
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 1.9e-10 68.6 56 57.1
Prupe.4G181800 Prunus persica HOM05D000002 ORTHO05D000047 1.9e-10 68.6 56 57.1
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 3.2e-10 67.8 55 54.5
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 5.4e-10 67.0 56 53.6
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 7.1e-10 66.6 56 51.8
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 7.1e-10 66.6 56 55.4
Cpa.g.sc15.71 Carica papaya HOM05D000002 ORTHO05D000047 9.2e-10 66.2 57 57.9
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.2e-10 66.2 56 53.6
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 1.2e-09 65.9 53 50.9
Manes.09G001867 Manihot esculenta HOM05D000002 ORTHO05D000047 2.7e-09 64.7 55 52.7
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 6.0e-09 63.5 55 49.1
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 6.0e-09 63.5 55 49.1
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 7.8e-09 63.2 55 52.7
Medtr3g046340 Medicago truncatula HOM05D000002 ORTHO05D000047 7.8e-09 63.2 57 45.6
Cpa.g.sc148.30 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-08 62.8 57 45.6
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-08 62.4 55 47.3
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-08 62.0 55 45.5
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 1.7e-08 62.0 55 49.1
Ca_14756_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 3.0e-08 61.2 52 51.9
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 61.2 55 47.3
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 61.2 55 47.3
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 61.2 55 47.3
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 61.2 55 47.3
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 61.2 55 47.3
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 61.2 55 47.3
SHI18135 Sapria himalayana HOM05D000002 ORTHO05D000047 3.9e-08 60.8 45 57.8
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 3.9e-08 60.8 55 47.3
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-08 60.5 55 43.6
Atru.chr11.1318 Acer truncatum HOM05D004129 ORTHO05D005039 6.6e-08 60.1 38 65.8
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-08 60.1 55 45.5
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 6.6e-08 60.1 42 57.1
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.6e-08 59.7 55 45.5
TAR575G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000047 8.6e-08 59.7 56 44.6
Phvul.008G096100 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 1.1e-07 59.3 57 50.9
vmacro02334 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 1.5e-07 58.9 56 48.2
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 2.5e-07 58.2 56 50.0
SHI01676 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-07 56.6 56 48.2
CSS0048790 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-07 56.2 56 50.0
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-06 55.8 56 46.4
Manes.17G072401 Manihot esculenta HOM05D000002 ORTHO05D000047 1.2e-06 55.8 55 47.3
Sabra15G0080200 Salix brachista HOM05D001046 ORTHO05D002934 1.6e-06 55.5 41 56.1
Sabra15G0080400 Salix brachista HOM05D001046 ORTHO05D002934 1.6e-06 55.5 41 56.1
vmacro17778 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 2.1e-06 55.1 57 42.1
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0036394 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-06 54.7 56 48.2
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-06 54.7 56 48.2
Manes.17G028999 Manihot esculenta HOM05D000002 ORTHO05D000047 2.8e-06 54.7 44 56.8
arahy.Tifrunner.gnm1.ann1.3LWB0T Arachis hypogaea HOM05D000002 ORTHO05D000047 3.6e-06 54.3 56 39.3
arahy.Tifrunner.gnm1.ann1.U3X8MH Arachis hypogaea HOM05D000002 ORTHO05D000047 3.6e-06 54.3 56 39.3
arahy.Tifrunner.gnm1.ann1.Z24LQA Arachis hypogaea HOM05D000002 ORTHO05D000047 3.6e-06 54.3 56 39.3
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 3.6e-06 54.3 55 41.8
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-06 53.9 47 53.2
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-06 53.9 47 53.2
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-06 53.9 47 53.2
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-06 53.9 47 53.2
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-06 53.9 56 44.6
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-06 53.5 56 46.4
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.2e-06 53.5 56 44.6
Hma1.2p1_1267F.1_g271550 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-06 53.1 47 51.1
Manes.07G095804 Manihot esculenta HOM05D000002 ORTHO05D000047 8.1e-06 53.1 44 56.8


User provided reference genes

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