Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 5.2e-187 657.5 325 100.0
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.2e-185 652.1 325 99.1
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.3e-148 530.0 330 79.4
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.3e-142 509.2 326 77.0
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.3e-142 509.2 326 77.0
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 7.2e-136 487.6 325 71.4
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.4e-134 483.4 321 75.1
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 9.7e-133 477.2 300 78.7
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.2e-130 470.3 342 68.1
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.3e-129 466.8 330 69.1
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 2.2e-129 466.1 330 68.5
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 4.2e-128 461.8 333 68.2
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 4.7e-127 458.4 330 66.7
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.0e-125 453.0 327 66.4
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.0e-125 453.0 325 68.3
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 2.0e-125 453.0 330 68.2
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 2.6e-125 452.6 323 68.1
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 1.8e-123 446.4 325 66.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.8e-123 446.4 329 66.3
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.2e-122 443.7 329 66.3
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 2.0e-122 443.0 325 64.3
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.7e-122 442.6 329 66.0
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 2.7e-122 442.6 329 66.6
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 2.7e-122 442.6 329 66.3
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 3.5e-122 442.2 327 63.6
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.3e-121 440.3 330 64.5
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.9e-121 439.1 325 65.5
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.1e-120 437.2 329 64.4
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.5e-120 436.8 327 63.0
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.5e-120 436.0 327 63.3
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 7.2e-120 434.5 330 64.8
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 7.2e-120 434.5 326 65.3
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.7e-119 432.6 330 64.8
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 4.7e-119 431.8 329 66.0
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 6.1e-119 431.4 325 64.9
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.8e-118 429.9 325 64.0
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.8e-118 429.9 329 64.7
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 3.0e-118 429.1 329 63.2
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 8.8e-118 427.6 328 63.4
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 1.2e-117 427.2 325 64.0
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 1.5e-117 426.8 330 63.0
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.7e-116 423.3 322 63.0
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.8e-116 422.5 325 64.3
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 3.7e-116 422.2 293 71.3
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 4.8e-116 421.8 325 65.5
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.1e-115 420.6 327 63.0
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.1e-115 419.1 325 64.0
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.1e-115 418.7 327 63.6
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 5.4e-115 418.3 325 64.0
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 9.1e-115 417.5 322 64.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.6e-114 416.8 327 63.0
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 7.7e-114 414.5 329 61.7
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 8.5e-113 411.0 326 59.8
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 8.5e-113 411.0 327 63.0
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 8.5e-113 411.0 325 60.9
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 2.5e-112 409.5 327 60.6
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 3.2e-112 409.1 334 61.4
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 3.2e-112 409.1 329 62.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.5e-112 408.3 333 62.5
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.2e-111 407.1 335 60.3
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.1e-111 406.4 333 62.2
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 2.7e-111 406.0 327 63.9
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 6.1e-111 404.8 329 62.3
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 4.0e-110 402.1 327 62.7
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 4.0e-110 402.1 330 59.7
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.7e-108 396.7 327 58.4
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.8e-107 393.3 345 55.9
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.8e-107 393.3 333 60.4
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 5.4e-107 391.7 324 61.7
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 1.0e-105 387.5 323 61.6
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 6.6e-105 384.8 297 65.0
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.5e-104 383.6 327 59.9
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 4.3e-104 382.1 330 55.8
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 7.3e-104 381.3 286 65.0
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.8e-103 379.4 325 60.6
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.8e-102 376.7 324 59.9
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 4.0e-102 375.6 367 55.0
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 6.8e-102 374.8 334 56.3
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 3.7e-100 369.0 330 55.2
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 2.5e-96 356.3 334 52.7
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.6e-95 353.6 325 53.5
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 1.8e-94 350.1 325 53.2
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 3.1e-94 349.4 327 54.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 4.0e-94 349.0 327 54.4
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 4.0e-94 349.0 327 54.4
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.0e-93 346.7 310 55.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 5.8e-93 345.1 322 54.7
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 4.9e-92 342.0 266 64.7
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 7.0e-91 338.2 326 51.8
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.6e-90 335.5 331 52.6
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 6.0e-90 335.1 336 52.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 5.6e-88 328.6 329 54.7
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 9.5e-88 327.8 332 53.0
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 3.1e-86 322.8 327 50.2
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 5.1e-81 305.4 264 58.7
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.6e-79 300.4 329 47.1
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 6.8e-78 295.0 264 59.1
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 8.9e-78 294.7 327 50.8
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 2.9e-76 289.7 339 44.2
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 4.1e-75 285.8 360 46.1
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 7.8e-74 281.6 213 65.7
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 4.0e-70 269.2 331 45.0
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.0e-65 254.6 181 68.5
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 3.9e-65 252.7 384 39.3
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.6e-63 247.3 383 38.6
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.8e-55 219.9 157 70.7
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 6.7e-49 198.7 133 69.2
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.3e-48 196.4 133 69.9
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.5e-40 170.2 123 67.5
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 6.3e-39 165.6 117 67.5
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.3e-36 157.9 133 54.1
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.2e-35 153.3 325 30.5
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.1e-34 150.6 104 70.2
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 3.6e-34 149.8 199 44.2
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 6.7e-33 145.6 118 66.9
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 5.0e-28 129.4 98 63.3
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 4.2e-27 126.3 147 49.7
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 7.2e-27 125.6 87 67.8
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 4.1e-22 109.8 268 30.2
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 3.6e-18 96.7 320 25.6
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.4e-17 94.7 61 72.1
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 6.3e-15 85.9 98 50.0
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 5.9e-13 79.3 65 53.8
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.5e-11 73.9 48 68.8
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 8.0e-10 68.9 49 67.3
Actinidia40385 Actinidia chinensis HOM05D002637 ORTHO05D055098 1.4e-06 58.2 80 45.0


User provided reference genes

Program Settings