Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015214 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.2e-77 293.1 146 100.0
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 4.2e-35 151.8 111 73.9
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 7.4e-32 141.0 91 76.9
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 7.4e-32 141.0 91 76.9
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 9.7e-32 140.6 97 75.3
Lj2A355G32 Lonicera japonica HOM05D006462 ORTHO05D008067 5.9e-29 131.3 90 70.0
Prupe.4G106200 Prunus persica HOM05D006462 ORTHO05D008067 5.9e-29 131.3 142 52.1
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 5.9e-29 131.3 70 85.7
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 7.7e-29 131.0 74 83.8
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 1.0e-28 130.6 77 80.5
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 1.0e-28 130.6 73 87.7
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 2.2e-28 129.4 105 63.8
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 3.8e-28 128.6 97 64.9
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 3.8e-28 128.6 93 67.7
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 5.0e-28 128.3 93 67.7
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 5.0e-28 128.3 93 67.7
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 5.0e-28 128.3 74 82.4
Manes.16G054132 Manihot esculenta HOM05D006462 ORTHO05D008067 6.5e-28 127.9 113 61.1
RcHm_v2.0_Chr5g0019331 Rosa chinensis HOM05D006462 ORTHO05D008067 1.1e-27 127.1 93 67.7
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 1.4e-27 126.7 74 81.1
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 1.4e-27 126.7 93 65.6
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 1.9e-27 126.3 106 62.3
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 2.5e-27 125.9 74 81.1
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 4.2e-27 125.2 122 54.1
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 5.5e-27 124.8 68 85.3
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 5.5e-27 124.8 112 56.2
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 7.2e-27 124.4 74 75.7
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 9.4e-27 124.0 85 71.8
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 1.2e-26 123.6 91 65.9
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 1.6e-26 123.2 91 65.9
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.6e-26 123.2 114 58.8
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 2.1e-26 122.9 73 78.1
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 4.7e-26 121.7 68 80.9
Nitab4.5_0011847g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 6.1e-26 121.3 73 76.7
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 7.9e-26 120.9 74 74.3
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 1.4e-25 120.2 91 67.0
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 1.4e-25 120.2 74 75.7
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 1.8e-25 119.8 97 63.9
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 2.3e-25 119.4 85 68.2
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 5.1e-25 118.2 74 73.0
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 5.1e-25 118.2 74 73.0
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 5.1e-25 118.2 74 73.0
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 6.7e-25 117.9 101 62.4
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 1.1e-24 117.1 73 76.7
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 1.1e-24 117.1 73 76.7
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 1.1e-24 117.1 81 74.1
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 1.1e-24 117.1 70 74.3
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 1.1e-24 117.1 110 55.5
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 1.1e-24 117.1 87 71.3
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 1.1e-24 117.1 66 81.8
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 1.5e-24 116.7 64 82.8
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 2.0e-24 116.3 74 73.0
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 2.0e-24 116.3 81 72.8
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 3.3e-24 115.5 66 80.3
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 4.4e-24 115.2 68 77.9
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 5.7e-24 114.8 101 59.4
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 9.7e-24 114.0 81 71.6
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 9.7e-24 114.0 70 74.3
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.3e-23 113.6 88 60.2
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 1.7e-23 113.2 95 60.0
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 2.8e-23 112.5 69 69.6
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 2.8e-23 112.5 66 77.3
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 2.8e-23 112.5 101 58.4
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 3.7e-23 112.1 81 64.2
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 3.7e-23 112.1 91 61.5
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 4.8e-23 111.7 70 70.0
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 4.8e-23 111.7 78 65.4
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 4.8e-23 111.7 78 65.4
Oeu052694.1 Olea europaea HOM05D006462 ORTHO05D008067 1.1e-22 110.5 58 91.4
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 1.8e-22 109.8 78 65.4
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 2.4e-22 109.4 80 70.0
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 3.1e-22 109.0 100 58.0
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 3.1e-22 109.0 76 65.8
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 3.1e-22 109.0 76 65.8
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 3.1e-22 109.0 66 75.8
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 5.3e-22 108.2 81 63.0
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 5.3e-22 108.2 93 61.3
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 7.0e-22 107.8 76 65.8
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 7.0e-22 107.8 66 74.2
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 9.1e-22 107.5 76 64.5
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 1.5e-21 106.7 133 50.4
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 2.0e-21 106.3 100 58.0
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 2.6e-21 105.9 66 72.7
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 4.5e-21 105.1 78 62.8
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 5.9e-21 104.8 90 56.7
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 7.7e-21 104.4 96 54.2
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 1.0e-20 104.0 86 59.3
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 1.0e-20 104.0 114 52.6
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 1.7e-20 103.2 76 63.2
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 3.8e-20 102.1 68 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 3.6e-18 95.5 68 63.2
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 2.6e-16 89.4 54 72.2
SEGI_23737 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 5.7e-16 88.2 72 59.7
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 7.4e-16 87.8 81 51.9
SEGI_41218 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 1.3e-15 87.0 78 55.1
arahy.Tifrunner.gnm1.ann1.CQ0UNW Arachis hypogaea HOM05D000112 ORTHO05D008067 6.3e-15 84.7 50 80.0
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 4.1e-14 82.0 56 69.6
CBR_g32011 Chara braunii HOM05D006462 ORTHO05D008067 1.0e-12 77.4 75 46.7
Thecc.06G136400 Theobroma cacao HOM05D006462 ORTHO05D008067 5.5e-11 71.6 40 75.0
Gohir.A10G046300 Gossypium hirsutum HOM05D006462 ORTHO05D008067 1.6e-10 70.1 40 70.0
Gohir.D10G047600 Gossypium hirsutum HOM05D006462 ORTHO05D008067 1.6e-10 70.1 40 70.0
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 2.7e-10 69.3 53 54.7
Zm00001eb032640 Zea mays HOM05D006462 ORTHO05D008067 1.8e-09 66.6 38 73.7
MBI18_g37401_MAGBIO Magnolia biondii HOM05D006462 ORTHO05D008067 4.0e-09 65.5 42 61.9
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 1.5e-08 63.5 81 50.6
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 2.2e-07 59.7 37 75.7
MCO09G072 Micromonas commoda HOM05D006462 ORTHO05D008067 6.3e-07 58.2 111 36.0
MBI18_g29620_MAGBIO Magnolia biondii HOM05D058980 ORTHO05D048595 9.1e-06 54.3 28 89.3


User provided reference genes

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