Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 7.1e-146 520.8 301 100.0
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 1.0e-96 357.5 301 66.8
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 8.8e-80 301.2 301 55.8
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 4.4e-79 298.9 229 74.2
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 7.0e-77 291.6 245 61.6
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 1.3e-75 287.3 300 51.7
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 2.1e-73 280.0 289 56.1
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 4.7e-73 278.9 303 53.8
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 8.0e-73 278.1 262 58.8
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 1.7e-67 260.4 261 54.0
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 1.5e-66 257.3 301 53.8
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.5e-66 256.5 295 49.5
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 1.8e-64 250.4 300 46.7
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 2.0e-63 246.9 294 48.0
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 2.2e-62 243.4 263 51.0
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 3.7e-62 242.7 234 53.4
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 4.9e-62 242.3 253 51.0
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 2.4e-61 240.0 299 45.2
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 9.2e-61 238.0 299 48.8
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 9.2e-61 238.0 278 50.4
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 1.6e-60 237.3 263 49.4
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 1.6e-60 237.3 263 49.4
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 2.0e-60 236.9 302 47.7
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 6.0e-60 235.3 220 58.6
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 1.3e-59 234.2 301 46.5
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 2.3e-59 233.4 297 48.5
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 6.6e-59 231.9 304 44.7
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 2.8e-57 226.5 257 49.0
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 4.0e-56 222.6 272 45.2
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 4.0e-56 222.6 260 46.9
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 4.0e-56 222.6 301 42.9
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 8.9e-56 221.5 252 47.6
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 1.5e-55 220.7 260 46.9
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 2.0e-55 220.3 256 47.3
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 2.0e-55 220.3 301 48.2
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 5.8e-55 218.8 246 47.6
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 1.7e-54 217.2 255 46.3
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 6.4e-54 215.3 275 44.4
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 6.4e-54 215.3 260 45.8
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 8.3e-54 214.9 297 44.4
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 1.1e-53 214.5 257 45.1
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.1e-53 214.5 295 46.1
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 1.4e-53 214.2 179 63.1
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 4.1e-53 212.6 253 45.1
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 9.2e-53 211.5 305 44.6
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 7.8e-52 208.4 301 42.5
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 1.7e-51 207.2 296 44.9
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 2.3e-51 206.8 287 43.2
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 3.9e-51 206.1 299 42.8
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 1.5e-50 204.1 255 45.9
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 1.9e-50 203.8 255 46.3
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 5.6e-50 202.2 294 41.2
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 2.8e-49 199.9 255 45.1
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 4.7e-49 199.1 263 43.7
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 8.1e-49 198.4 256 45.7
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 5.2e-48 195.7 251 47.8
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 5.8e-47 192.2 242 44.2
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 1.7e-46 190.7 196 50.0
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 1.7e-46 190.7 260 41.2
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 2.2e-46 190.3 180 54.4
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 3.7e-46 189.5 291 39.2
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 1.4e-45 187.6 260 40.4
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 1.2e-44 184.5 237 45.1
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 1.6e-44 184.1 281 41.3
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 1.6e-44 184.1 254 41.7
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 7.8e-44 181.8 274 42.0
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 7.8e-44 181.8 185 49.7
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 1.7e-43 180.6 238 42.4
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 1.2e-41 174.5 297 36.4
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 2.8e-41 173.3 205 49.8
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 3.6e-41 172.9 296 37.5
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 1.1e-40 171.4 189 50.3
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 3.1e-40 169.9 265 39.6
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 1.2e-39 167.9 255 42.4
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 5.8e-39 165.6 268 36.2
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 7.6e-39 165.2 211 46.4
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 6.0e-36 155.6 236 39.8
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 7.8e-36 155.2 254 39.0
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 7.8e-36 155.2 254 39.0
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 5.1e-35 152.5 236 38.6
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 8.7e-35 151.8 171 48.5
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 1.5e-34 151.0 234 38.9
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 1.5e-34 151.0 262 36.3
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 1.9e-34 150.6 217 43.3
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 7.3e-34 148.7 219 39.7
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 9.6e-34 148.3 213 41.8
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 4.7e-33 146.0 238 39.1
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 3.1e-32 143.3 263 35.7
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 2.0e-31 140.6 268 31.3
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 6.6e-27 125.6 224 39.7
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 8.7e-27 125.2 261 35.2
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 4.5e-23 112.8 139 43.2
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 4.6e-20 102.8 301 26.2
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 6.0e-20 102.4 114 51.8
Zm00001eb203200 Zea mays HOM05D007447 ORTHO05D009372 5.6e-18 95.9 304 26.3
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 2.8e-17 93.6 230 29.1
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.8e-16 90.9 133 40.6
MELO3C027350.2 Cucumis melo HOM05D007447 ORTHO05D009372 1.2e-15 88.2 100 46.0
Gohir.A02G158500 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.9e-10 70.9 69 52.2
Gohir.A01G124600 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.5e-10 70.5 69 52.2
Gohir.A01G131222 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.5e-10 70.5 69 52.2
AUR62031072 Chenopodium quinoa HOM05D007447 ORTHO05D009372 3.7e-09 66.6 216 26.4
HPP92_005282 Vanilla planifolia HOM05D007447 ORTHO05D009372 9.0e-08 62.0 253 24.5
SEGI_19030 Sequoiadendron giganteum HOM05D002665 ORTHO05D002991 2.0e-07 60.8 60 46.7
THA.LOC104803590 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 2.2e-06 57.4 60 45.0
Peaxi162Scf00045g01455 Petunia axillaris HOM05D002665 ORTHO05D002991 3.8e-06 56.6 59 49.2


User provided reference genes

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