Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.8e-31 136.7 71 100.0
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.8e-16 88.2 73 68.5
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.2e-15 84.0 47 89.4
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.7e-13 77.8 41 92.7
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 3.7e-13 77.8 73 58.9
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 1.1e-12 76.3 73 57.5
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 1.9e-12 75.5 73 57.5
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 4.1e-12 74.3 69 55.1
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 4.1e-12 74.3 73 57.5
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.6e-11 72.4 70 58.6
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 2.7e-11 71.6 73 54.8
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 3.5e-11 71.2 56 67.9
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 3.5e-11 71.2 73 52.1
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 3.5e-11 71.2 58 65.5
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 3.5e-11 71.2 73 54.8
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 4.6e-11 70.9 73 53.4
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 6.0e-11 70.5 73 54.8
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 6.0e-11 70.5 67 55.2
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 7.8e-11 70.1 73 54.8
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 1.0e-10 69.7 69 53.6
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 1.0e-10 69.7 69 53.6
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 1.0e-10 69.7 69 53.6
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 1.0e-10 69.7 42 76.2
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.3e-10 69.3 56 66.1
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 1.3e-10 69.3 73 53.4
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 1.3e-10 69.3 73 52.1
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 1.7e-10 68.9 73 53.4
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 1.7e-10 68.9 73 52.1
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.7e-10 68.9 69 53.6
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 1.7e-10 68.9 73 52.1
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.7e-10 68.9 68 55.9
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 2.3e-10 68.6 56 67.9
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 2.3e-10 68.6 73 53.4
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 2.3e-10 68.6 73 53.4
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 2.3e-10 68.6 56 66.1
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 2.3e-10 68.6 56 66.1
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 2.3e-10 68.6 73 53.4
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.3e-10 68.6 73 53.4
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.3e-10 68.6 73 53.4
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 2.3e-10 68.6 70 54.3
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 3.0e-10 68.2 43 74.4
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 3.0e-10 68.2 69 52.2
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 3.0e-10 68.2 73 54.8
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 3.9e-10 67.8 42 76.2
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 3.9e-10 67.8 73 52.1
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 3.9e-10 67.8 56 62.5
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.9e-10 67.8 56 64.3
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 3.9e-10 67.8 56 64.3
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 3.9e-10 67.8 43 72.1
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 3.9e-10 67.8 58 65.5
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 5.1e-10 67.4 56 64.3
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 5.1e-10 67.4 56 64.3
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 5.1e-10 67.4 41 78.0
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 5.1e-10 67.4 41 78.0
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 6.6e-10 67.0 42 73.8
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 6.6e-10 67.0 43 72.1
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 6.6e-10 67.0 73 49.3
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 6.6e-10 67.0 69 55.1
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 8.6e-10 66.6 41 75.6
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 8.6e-10 66.6 56 64.3
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 8.6e-10 66.6 44 68.2
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 1.5e-09 65.9 66 54.5
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.5e-09 65.9 41 73.2
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 1.9e-09 65.5 58 63.8
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 1.9e-09 65.5 58 62.1
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.9e-09 65.5 56 64.3
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 1.9e-09 65.5 68 51.5
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 2.5e-09 65.1 43 69.8
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 2.5e-09 65.1 70 51.4
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 2.5e-09 65.1 58 60.3
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 2.5e-09 65.1 41 73.2
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 2.5e-09 65.1 43 72.1
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 3.3e-09 64.7 69 50.7
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 3.3e-09 64.7 42 71.4
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 3.3e-09 64.7 56 62.5
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 4.3e-09 64.3 44 70.5
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 4.3e-09 64.3 65 56.9
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 4.3e-09 64.3 73 49.3
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 4.3e-09 64.3 73 50.7
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 5.6e-09 63.9 41 73.2
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 5.6e-09 63.9 41 73.2
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 5.6e-09 63.9 41 73.2
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 5.6e-09 63.9 41 73.2
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 5.6e-09 63.9 41 73.2
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 5.6e-09 63.9 73 50.7
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 5.6e-09 63.9 41 70.7
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 7.3e-09 63.5 41 73.2
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 7.3e-09 63.5 46 65.2
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 7.3e-09 63.5 43 69.8
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 7.3e-09 63.5 73 50.7
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 9.5e-09 63.2 41 73.2
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 1.2e-08 62.8 73 52.1
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 1.2e-08 62.8 73 50.7
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 1.6e-08 62.4 58 62.1
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 2.1e-08 62.0 73 49.3
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 2.1e-08 62.0 73 49.3
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 2.8e-08 61.6 68 54.4
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 2.8e-08 61.6 73 50.7
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 3.6e-08 61.2 68 48.5
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 4.7e-08 60.8 42 66.7
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 4.7e-08 60.8 42 73.8
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 4.7e-08 60.8 65 50.8
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 6.2e-08 60.5 73 47.9
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 6.2e-08 60.5 71 54.9
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 6.2e-08 60.5 42 71.4
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 8.1e-08 60.1 69 47.8
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 1.1e-07 59.7 73 45.2
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 1.1e-07 59.7 43 62.8
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 1.4e-07 59.3 38 71.1
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 3.1e-07 58.2 73 47.9
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 4.0e-07 57.8 58 56.9
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 4.0e-07 57.8 42 66.7
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 6.8e-07 57.0 44 61.4
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 1.2e-06 56.2 58 58.6
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 2.0e-06 55.5 41 68.3
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.0e-06 55.5 33 75.8
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 4.4e-06 54.3 58 55.2
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 7.6e-06 53.5 56 55.4
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 7.6e-06 53.5 43 58.1


User provided reference genes

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