Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015173 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 5.0e-111 404.4 203 100.0
CSS0049663 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 2.3e-100 369.0 224 86.2
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 8.3e-74 280.8 246 65.0
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.0e-71 273.9 232 66.8
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.5e-70 270.0 256 60.9
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 2.6e-67 259.2 232 63.8
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 7.6e-59 231.1 249 55.4
CSS0018718 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.4e-28 130.6 181 49.7
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.9e-22 110.2 265 32.1
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-21 107.1 235 31.9
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 9.0e-20 101.3 259 31.3
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 2.3e-15 86.7 254 28.7
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 3.0e-15 86.3 267 27.0
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 3.0e-15 86.3 266 27.1
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 8.8e-15 84.7 249 28.5
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 5.7e-14 82.0 215 28.4
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 9.7e-14 81.3 275 27.6
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.7e-13 80.5 216 28.7
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.8e-13 79.7 216 28.2
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 6.9e-12 75.1 249 27.3
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 1.5e-11 73.9 98 40.8
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 7.7e-11 71.6 208 28.8
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-10 71.2 245 27.3
Rhsim08G0135500 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.0e-10 71.2 84 50.0
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 1.3e-10 70.9 249 25.7
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.3e-10 70.9 250 23.6
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 1.7e-10 70.5 96 39.6
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 1.1e-09 67.8 248 27.8
Dinv00636 Davidia involucrata HOM05D021688 ORTHO05D022442 1.1e-09 67.8 130 33.1
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 2.5e-09 66.6 118 33.1
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 3.2e-09 66.2 119 36.1
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.2e-09 65.1 166 28.3
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.4e-09 64.7 201 28.4
CSS0033166 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.2e-08 64.3 74 56.8
EL10Ac5g12237 Beta vulgaris HOM05D005504 ORTHO05D002688 2.7e-08 63.2 169 29.6
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 4.7e-08 62.4 102 34.3
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 4.7e-08 62.4 266 24.8
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 7.9e-08 61.6 106 32.1
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 1.4e-07 60.8 233 24.0
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 1.8e-07 60.5 104 32.7
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 2.3e-07 60.1 102 33.3
CAN.G410.12 Capsicum annuum HOM05D008574 ORTHO05D010611 3.9e-07 59.3 83 43.4
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 6.7e-07 58.5 152 27.0
COL.COLO4_28891 Corchorus olitorius HOM05D021688 ORTHO05D022442 1.5e-06 57.4 108 32.4
ECA233G5926 Erigeron canadensis HOM05D012386 ORTHO05D002688 1.5e-06 57.4 100 32.0
Hma1.2p1_0317F.1_g123430 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-06 56.2 97 30.9
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-06 55.8 84 40.5
AUR62044079 Chenopodium quinoa HOM05D012386 ORTHO05D002688 5.7e-06 55.5 128 31.2
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-06 54.7 98 37.8
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 9.7e-06 54.7 98 37.8


User provided reference genes

Program Settings