Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.8e-133 477.6 252 100.0
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 8.4e-116 420.6 263 87.1
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 1.1e-104 383.6 262 77.9
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.5e-104 383.3 262 80.2
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.1e-102 375.6 262 77.1
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 2.2e-100 369.4 262 74.8
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 7.1e-99 364.4 259 74.5
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 1.2e-98 363.6 262 74.0
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 1.3e-97 360.1 262 74.8
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 1.8e-94 349.7 262 72.1
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 9.0e-94 347.4 262 71.0
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 1.5e-93 346.7 256 72.7
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 2.6e-93 345.9 262 71.0
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 2.6e-93 345.9 262 71.0
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 7.6e-93 344.4 262 70.6
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 1.7e-92 343.2 259 71.0
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 2.2e-92 342.8 259 71.0
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 4.9e-92 341.7 262 70.6
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 8.4e-92 340.9 262 69.8
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 1.4e-91 340.1 262 69.8
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 5.5e-91 338.2 262 69.8
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 7.1e-91 337.8 265 69.8
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.7e-90 335.9 259 70.3
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 7.9e-90 334.3 262 69.5
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 1.3e-89 333.6 262 68.7
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 2.3e-89 332.8 263 67.7
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 2.3e-89 332.8 262 69.8
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 1.3e-87 327.0 264 68.2
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.6e-87 326.6 262 73.7
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 2.8e-87 325.9 262 67.6
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 3.7e-87 325.5 262 67.9
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.8e-87 325.1 262 73.7
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 1.8e-86 323.2 262 66.4
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 5.3e-86 321.6 262 69.1
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 5.3e-86 321.6 258 68.6
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 6.9e-86 321.2 264 66.3
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 9.0e-86 320.9 261 67.8
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 1.2e-85 320.5 263 68.1
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 1.5e-85 320.1 260 66.9
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 2.0e-85 319.7 260 66.5
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 4.5e-85 318.5 261 67.0
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 5.8e-85 318.2 260 66.2
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 7.6e-85 317.8 261 64.4
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 7.6e-85 317.8 262 66.8
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 1.7e-84 316.6 261 66.7
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.7e-84 316.6 260 66.5
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 1.7e-84 316.6 260 65.8
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 3.8e-84 315.5 260 66.2
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 6.5e-84 314.7 260 66.2
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 6.5e-84 314.7 260 65.8
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 1.1e-83 313.9 260 65.8
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 4.2e-83 312.0 261 66.3
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 7.1e-83 311.2 266 65.0
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 9.3e-83 310.8 262 63.7
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.6e-82 310.1 260 66.9
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 1.6e-82 310.1 261 65.5
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 2.1e-82 309.7 264 64.0
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 4.6e-82 308.5 263 63.1
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 4.6e-82 308.5 261 65.5
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 6.0e-82 308.1 286 63.3
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 5.1e-81 305.1 263 63.5
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 6.7e-81 304.7 260 63.8
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 8.7e-81 304.3 263 63.1
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 2.5e-80 302.8 260 63.1
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 1.6e-79 300.1 260 63.1
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 1.6e-79 300.1 260 62.7
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 2.8e-79 299.3 264 62.9
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.8e-79 299.3 264 61.0
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 1.8e-78 296.6 260 60.8
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 1.8e-78 296.6 260 60.8
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 2.6e-77 292.7 262 59.9
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 3.4e-77 292.4 260 63.5
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 4.5e-77 292.0 258 62.8
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 1.3e-76 290.4 262 60.7
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 5.0e-76 288.5 260 60.8
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 6.5e-76 288.1 262 60.3
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 3.2e-75 285.8 260 60.4
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 1.6e-74 283.5 260 59.6
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 1.0e-73 280.8 262 58.8
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.4e-73 280.4 261 59.0
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.4e-73 280.4 261 59.0
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.0e-73 279.3 238 68.5
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 3.3e-72 275.8 260 59.2
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 1.3e-71 273.9 259 60.6
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 2.8e-71 272.7 259 58.7
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 1.1e-70 270.8 262 58.0
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 3.1e-70 269.2 264 56.1
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 9.1e-70 267.7 253 58.1
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 1.5e-69 266.9 266 56.8
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 1.5e-69 266.9 266 56.8
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 3.4e-69 265.8 266 57.1
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 4.5e-69 265.4 262 60.7
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 5.9e-69 265.0 262 60.3
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 5.9e-69 265.0 264 56.1
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 7.7e-69 264.6 266 56.4
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 1.3e-68 263.8 266 56.4
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 1.3e-68 263.8 266 56.4
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 3.8e-68 262.3 267 58.1
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 8.5e-68 261.2 262 59.5
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 1.1e-67 260.8 266 56.0
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 1.1e-67 260.8 265 55.5
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 2.5e-67 259.6 258 56.6
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 1.6e-66 256.9 254 52.8
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 4.7e-66 255.4 262 58.0
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 1.4e-65 253.8 266 53.0
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 3.3e-64 249.2 247 51.4
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 1.3e-63 247.3 267 52.8
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 2.2e-63 246.5 207 64.7
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 3.7e-63 245.7 264 55.7
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 8.2e-63 244.6 247 51.4
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 1.4e-62 243.8 266 52.3
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 3.1e-62 242.7 258 54.7
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 5.9e-61 238.4 267 52.4
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 1.0e-60 237.7 251 50.2
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 6.5e-60 235.0 251 49.8
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 1.4e-59 233.8 263 53.2
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 1.9e-59 233.4 263 51.7
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 3.2e-59 232.6 267 50.9
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 3.2e-59 232.6 267 50.9
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 6.1e-58 228.4 258 50.0
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 1.3e-55 220.7 252 49.2
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 4.8e-55 218.8 266 48.5
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 6.3e-55 218.4 251 49.4
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 7.0e-54 214.9 265 48.7
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 5.9e-53 211.8 265 47.2
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 2.2e-52 209.9 250 52.4
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 7.7e-45 184.9 232 51.3
TAR623G1393 Trochodendron aralioides HOM05D003450 ORTHO05D004150 1.5e-43 180.6 158 63.3
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 7.2e-43 178.3 251 43.8
Atru.chr6.2427 Acer truncatum HOM05D003450 ORTHO05D004150 8.0e-42 174.9 177 59.9
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 6.8e-41 171.8 116 73.3
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 4.8e-39 165.6 187 51.9
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 1.4e-38 164.1 132 63.6
FAN18G3542 Fragaria x ananassa HOM05D003450 ORTHO05D004150 3.5e-37 159.5 154 60.4
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.5e-37 159.1 94 87.2
CSS0010567 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 6.6e-36 155.2 92 90.2
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 1.8e-33 147.1 297 36.7
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 1.8e-33 147.1 121 62.0
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 4.0e-33 146.0 283 36.7
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 3.4e-32 142.9 285 35.4
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 1.3e-31 141.0 145 51.0
Zm00001eb442080 Zea mays HOM05D003450 ORTHO05D004150 1.3e-31 141.0 145 51.0
Zm00001eb191840 Zea mays HOM05D003450 ORTHO05D004150 5.4e-30 135.6 137 52.6
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 2.0e-29 133.7 278 35.3
Zm00001eb068810 Zea mays HOM05D003450 ORTHO05D004150 2.0e-29 133.7 137 52.6
Zm00001eb190000 Zea mays HOM05D003450 ORTHO05D004150 2.0e-29 133.7 137 51.8
Zm00001eb162870 Zea mays HOM05D003450 ORTHO05D004150 2.7e-29 133.3 137 51.8
Zm00001eb235100 Zea mays HOM05D003450 ORTHO05D004150 4.5e-29 132.5 137 51.8
Zm00001eb170860 Zea mays HOM05D003450 ORTHO05D004150 2.9e-28 129.8 137 51.1
Atru.chr6.2428 Acer truncatum HOM05D003450 ORTHO05D004150 1.9e-27 127.1 79 82.3
TPR.G33244 Trifolium pratense HOM05D003450 ORTHO05D004150 2.5e-27 126.7 104 69.2
Sc07g0005170 Simmondsia chinensis HOM05D003450 ORTHO05D004150 4.3e-27 125.9 89 75.3
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 6.8e-25 118.6 104 58.7
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 8.9e-25 118.2 122 56.6
Zm00001eb367390 Zea mays HOM05D003450 ORTHO05D004150 3.2e-22 109.8 122 48.4
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.7e-21 106.7 163 44.2
Aqoxy2G03587 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 3.9e-20 102.8 91 59.3
Sopen02g029170 Solanum pennellii HOM05D003450 ORTHO05D004150 2.5e-19 100.1 163 42.9
BolC2t11571H Brassica oleracea HOM05D003450 ORTHO05D004150 3.4e-16 89.7 180 37.8
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 8.9e-09 65.1 279 24.7
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 1.5e-08 64.3 60 61.7
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 2.6e-08 63.5 247 30.4
C02p55220 Brassica napus HOM05D003450 ORTHO05D004150 3.2e-06 56.6 69 46.4
BolC2t11570H Brassica oleracea HOM05D003450 ORTHO05D004150 3.2e-06 56.6 69 46.4


User provided reference genes

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