Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.0e-193 677.6 332 100.0
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 6.2e-159 564.3 355 83.1
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 7.5e-80 301.6 262 62.2
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.2e-77 294.3 257 63.0
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.4e-70 270.0 251 56.2
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 3.3e-67 259.6 250 57.2
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 3.6e-66 256.1 297 49.5
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 9.8e-56 221.5 249 50.6
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.9e-54 217.2 243 52.3
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 4.1e-54 216.1 243 52.3
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.3e-51 206.1 249 51.4
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.8e-50 203.4 246 51.6
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 3.6e-50 203.0 249 48.2
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.8e-49 200.7 200 51.0
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 2.6e-48 196.8 255 45.1
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.1e-45 187.2 213 47.4
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.7e-45 186.8 263 41.4
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.3e-44 184.5 225 48.9
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.9e-44 183.0 260 45.0
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 8.6e-44 181.8 222 42.8
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 5.6e-43 179.1 248 43.5
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.2e-42 177.9 208 45.7
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 3.6e-42 176.4 255 39.6
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 2.3e-41 173.7 223 43.5
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 2.0e-40 170.6 224 42.4
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 9.9e-40 168.3 224 42.4
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.3e-39 167.9 224 42.0
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 5.4e-38 162.5 222 43.2
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 5.4e-38 162.5 261 42.1
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 7.8e-37 158.7 248 39.9
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 6.6e-36 155.6 222 41.9
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.1e-35 154.8 215 42.3
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.5e-35 154.5 242 40.9
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 9.5e-35 151.8 244 39.3
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.8e-34 150.2 210 42.4
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 6.2e-34 149.1 235 42.1
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 6.2e-34 149.1 241 41.9
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 6.2e-34 149.1 263 37.6
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 8.9e-33 145.2 242 40.9
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.3e-31 141.4 187 43.9
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 6.4e-31 139.0 178 45.5
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 6.4e-31 139.0 178 45.5
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 2.7e-29 133.7 181 43.6
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 3.9e-28 129.8 187 40.6
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 6.6e-28 129.0 173 44.5
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 8.7e-28 128.6 165 45.5
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.5e-27 127.1 140 46.4
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 5.6e-27 125.9 210 36.2
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 2.8e-26 123.6 225 35.1
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.4e-25 120.6 106 56.6
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 3.1e-25 120.2 246 39.0
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 3.4e-24 116.7 246 38.2
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.3e-23 114.8 172 45.9
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.7e-23 114.4 158 46.8
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.9e-23 113.6 115 51.3
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.9e-23 113.6 138 42.8
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.9e-22 110.9 173 41.0
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.9e-22 110.9 178 34.3
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 7.8e-21 105.5 163 36.8
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 4.8e-18 96.3 183 36.6
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 2.1e-13 80.9 185 33.0
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 2.3e-12 77.4 112 39.3
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 1.9e-11 74.3 106 40.6
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 3.1e-09 67.0 110 32.7
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 4.0e-09 66.6 51 58.8
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.5e-08 64.7 45 60.0


User provided reference genes

Program Settings