Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015149 Camellia sinensis var. sinensis HOM05D005469 ORTHO05D001701 7.8e-41 169.9 76 100.0
CSS0028429 Camellia sinensis var. sinensis HOM05D005469 ORTHO05D001701 2.1e-22 108.6 133 43.6
Dinv21761 Davidia involucrata HOM05D005469 ORTHO05D001701 2.3e-21 105.1 135 41.5
Hma1.2p1_3227F.1_g334240 Hydrangea macrophylla HOM05D005469 ORTHO05D001701 4.0e-21 104.4 135 40.7
GSVIVG01032773001 Vitis vinifera HOM05D005469 ORTHO05D001701 2.9e-19 98.2 133 39.1
TAR623G0989 Trochodendron aralioides HOM05D005469 ORTHO05D001701 1.1e-18 96.3 133 39.8
FvH4_7g24940 Fragaria vesca HOM05D005469 ORTHO05D001701 1.4e-18 95.9 132 38.6
FAN06G3559 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.4e-18 95.9 132 38.6
TAR633G0722 Trochodendron aralioides HOM05D005469 ORTHO05D001701 1.9e-18 95.5 133 38.3
Glyma.11G232100 Glycine max HOM05D005469 ORTHO05D001701 3.2e-18 94.7 132 37.1
Glyma.18G025200 Glycine max HOM05D005469 ORTHO05D001701 3.2e-18 94.7 132 37.1
Manes.07G132700 Manihot esculenta HOM05D005469 ORTHO05D001701 4.1e-18 94.4 133 36.8
MD01G1156800 Malus domestica HOM05D005469 ORTHO05D001701 7.1e-18 93.6 133 39.1
Lalb_Chr08g0231561 Lupinus albus HOM05D005469 ORTHO05D001701 9.2e-18 93.2 132 37.1
FAN10G1213 Fragaria x ananassa HOM05D005469 ORTHO05D001701 1.6e-17 92.4 132 37.9
Cc02_g06130 Coffea canephora HOM05D005469 ORTHO05D001701 2.1e-17 92.0 130 39.2
RcHm_v2.0_Chr1g0370811 Rosa chinensis HOM05D005469 ORTHO05D001701 2.1e-17 92.0 132 37.1
Lj1C959T17 Lonicera japonica HOM05D005469 ORTHO05D001701 2.7e-17 91.7 128 38.3
Ca_15147_v3 Cicer arietinum L. HOM05D005469 ORTHO05D001701 6.0e-17 90.5 132 35.6
Phvul.001G245200 Phaseolus vulgaris HOM05D005469 ORTHO05D001701 1.0e-16 89.7 132 35.6
TPR.G30151 Trifolium pratense HOM05D005469 ORTHO05D001701 1.0e-16 89.7 132 36.4
VMungo1383G2982 Vigna mungo HOM05D005469 ORTHO05D001701 1.0e-16 89.7 132 34.8
Ciclev10033597m.g Citrus clementina HOM05D005469 ORTHO05D001701 1.3e-16 89.4 133 36.1
SalBow3G1256 Salvia bowleyana HOM05D005469 ORTHO05D001701 1.7e-16 89.0 135 36.3
QL08p063579 Quercus lobata HOM05D005469 ORTHO05D001701 2.3e-16 88.6 133 36.8
Haze_17260 Corylus avellana HOM05D005469 ORTHO05D001701 3.0e-16 88.2 128 39.1
Psat5g130360 Pisum sativum HOM05D005469 ORTHO05D001701 3.0e-16 88.2 131 35.9
MBI15_g40303_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 5.1e-16 87.4 133 34.6
TWI73G0354 Tripterygium wilfordii HOM05D005469 ORTHO05D001701 6.6e-16 87.0 132 36.4
Medtr3g071470 Medicago truncatula HOM05D005469 ORTHO05D001701 8.6e-16 86.7 132 34.8
Thecc.10G012300 Theobroma cacao HOM05D005469 ORTHO05D001701 8.6e-16 86.7 128 38.3
HanXRQChr14g0459401 Helianthus annuus HOM05D005469 ORTHO05D001701 1.1e-15 86.3 129 35.7
Lsat_1_v5_gn_2_124301 Lactuca sativa HOM05D005469 ORTHO05D001701 1.1e-15 86.3 129 35.7
CiPaw.02G194900 Carya illinoinensis HOM05D005469 ORTHO05D001701 1.5e-15 85.9 133 35.3
ECA238G2582 Erigeron canadensis HOM05D005469 ORTHO05D001701 1.5e-15 85.9 129 34.9
Lalb_Chr11g0075051 Lupinus albus HOM05D005469 ORTHO05D001701 1.5e-15 85.9 132 34.8
Cfa001288 Carpinus fangiana HOM05D005469 ORTHO05D001701 1.9e-15 85.5 128 36.7
Aqoxy1G01324 Aquilegia oxysepala HOM05D005469 ORTHO05D001701 2.5e-15 85.1 128 35.9
Cfa001290 Carpinus fangiana HOM05D005469 ORTHO05D001701 2.5e-15 85.1 128 38.3
Haze_17261 Corylus avellana HOM05D005469 ORTHO05D001701 4.3e-15 84.3 128 37.5
ECA238G1751 Erigeron canadensis HOM05D005469 ORTHO05D001701 4.3e-15 84.3 129 34.9
Gohir.D10G250700 Gossypium hirsutum HOM05D005469 ORTHO05D001701 4.3e-15 84.3 134 36.6
Gorai.011G291100 Gossypium raimondii HOM05D005469 ORTHO05D001701 4.3e-15 84.3 134 36.6
MD07G1225500 Malus domestica HOM05D005469 ORTHO05D001701 5.6e-15 84.0 133 36.8
Potri.010G185400 Populus trichocarpa HOM05D005469 ORTHO05D001701 7.3e-15 83.6 133 35.3
HanXRQChr07g0203111 Helianthus annuus HOM05D005469 ORTHO05D001701 9.5e-15 83.2 129 34.1
Lj6g0021216 Lotus japonicus HOM05D005469 ORTHO05D001701 9.5e-15 83.2 128 35.9
PSO339G0551 Papaver somniferum HOM05D005469 ORTHO05D001701 2.1e-14 82.0 131 35.9
SGA_v2.0_scaffold44G16665 Striga asiatica HOM05D005469 ORTHO05D001701 3.6e-14 81.3 130 35.4
Duzib128G1408 Durio zibethinus HOM05D005469 ORTHO05D001701 8.1e-14 80.1 134 35.8
Duzib114G0491 Durio zibethinus HOM05D005469 ORTHO05D001701 1.1e-13 79.7 133 33.8
Migut.F00654 Erythranthe guttata HOM05D005469 ORTHO05D001701 1.1e-13 79.7 130 33.8
LjContig00357g0002708 Lotus japonicus HOM05D005469 ORTHO05D001701 1.4e-13 79.3 130 34.6
PSO017G6429 Papaver somniferum HOM05D005469 ORTHO05D001701 1.8e-13 79.0 128 35.2
Duzib106G0906 Durio zibethinus HOM05D005469 ORTHO05D001701 3.1e-13 78.2 135 35.6
Nitab4.5_0003391g0070 Nicotiana tabacum HOM05D000087 ORTHO05D000793 5.2e-13 77.4 130 34.6
COL.COLO4_15412 Corchorus olitorius HOM05D005469 ORTHO05D001701 6.8e-13 77.0 134 33.6
PSO349G0001 Papaver somniferum HOM05D005469 ORTHO05D001701 6.8e-13 77.0 42 73.8
Solyc05g052500.4 Solanum lycopersicum HOM05D000087 ORTHO05D000793 8.9e-13 76.6 130 32.3
MBI03_g21448_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 1.2e-12 76.3 113 39.8
PSO801G0522 Papaver somniferum HOM05D005469 ORTHO05D001701 1.2e-12 76.3 126 34.9
Potri.008G072000 Populus trichocarpa HOM05D005469 ORTHO05D001701 1.2e-12 76.3 49 65.3
Sabra08G0053200 Salix brachista HOM05D005469 ORTHO05D001701 1.5e-12 75.9 131 32.8
Eucgr.G03079 Eucalyptus grandis HOM05D005469 ORTHO05D001701 2.6e-12 75.1 130 31.5
Sopen05g031040 Solanum pennellii HOM05D005469 ORTHO05D001701 2.6e-12 75.1 130 31.5
Nitab4.5_0000058g0190 Nicotiana tabacum HOM05D005469 ORTHO05D001701 3.4e-12 74.7 130 33.1
Nitab4.5_0000789g0080 Nicotiana tabacum HOM05D005469 ORTHO05D001701 3.4e-12 74.7 130 33.8
Lj8C63T7 Lonicera japonica HOM05D005469 ORTHO05D001701 4.4e-12 74.3 132 36.4
PGSC0003DMG400027122 Solanum tuberosum HOM05D005469 ORTHO05D001701 4.4e-12 74.3 130 31.5
EL10Ac2g04878 Beta vulgaris HOM05D005469 ORTHO05D001701 5.8e-12 73.9 133 31.6
Nitab4.5_0000666g0120 Nicotiana tabacum HOM05D005469 ORTHO05D001701 5.8e-12 73.9 130 32.3
CANSAT56G3078 Cannabis sativa HOM05D005469 ORTHO05D001701 7.6e-12 73.6 131 32.1
CANSAT56G4151 Cannabis sativa HOM05D005469 ORTHO05D001701 7.6e-12 73.6 131 32.1
Atru.chr12.80 Acer truncatum HOM05D005469 ORTHO05D001701 9.9e-12 73.2 133 30.1
Sc10g0002540 Simmondsia chinensis HOM05D005469 ORTHO05D001701 9.9e-12 73.2 130 33.1
Gohir.A10G238851 Gossypium hirsutum HOM05D005469 ORTHO05D001701 1.7e-11 72.4 48 62.5
Sabra10G0142600 Salix brachista HOM05D005469 ORTHO05D001701 2.2e-11 72.0 49 61.2
Aa31LG11G6570 Aethionema arabicum HOM05D005469 ORTHO05D001701 2.9e-11 71.6 134 32.1
Prupe.2G254300 Prunus persica HOM05D005469 ORTHO05D001701 2.9e-11 71.6 46 65.2
Ah.10g036310 Amaranthus hybridus HOM05D005469 ORTHO05D001701 4.9e-11 70.9 133 31.6
MBI03_g43893_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 4.9e-11 70.9 133 34.6
PGR142G1835 Punica granatum HOM05D005469 ORTHO05D001701 4.9e-11 70.9 130 32.3
arahy.Tifrunner.gnm1.ann1.JSQZ9G Arachis hypogaea HOM05D005469 ORTHO05D001701 1.4e-10 69.3 126 37.3
THA.LOC104816535 Tarenaya hassleriana HOM05D005469 ORTHO05D001701 1.4e-10 69.3 138 31.2
COL.COLO4_25530 Corchorus olitorius HOM05D005469 ORTHO05D001701 1.9e-10 68.9 128 33.6
AUR62012286 Chenopodium quinoa HOM05D005469 ORTHO05D001701 2.4e-10 68.6 130 31.5
AUR62022927 Chenopodium quinoa HOM05D005469 ORTHO05D001701 3.2e-10 68.2 130 30.8
ClCG07G004420 Citrullus lanatus HOM05D005469 ORTHO05D001701 3.2e-10 68.2 128 33.6
Os01g0164300 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 4.1e-10 67.8 132 31.8
Carub.0006s0440 Capsella rubella HOM05D005469 ORTHO05D001701 5.4e-10 67.4 134 32.1
MELO3C018370.2 Cucumis melo HOM05D005469 ORTHO05D001701 5.4e-10 67.4 128 32.0
Manes.10G009700 Manihot esculenta HOM05D005469 ORTHO05D001701 5.4e-10 67.4 49 57.1
PGSC0003DMG400030033 Solanum tuberosum HOM05D005469 ORTHO05D001701 5.4e-10 67.4 130 31.5
THA.LOC104826842 Tarenaya hassleriana HOM05D005469 ORTHO05D001701 7.1e-10 67.0 138 31.2
CAN.G19.12 Capsicum annuum HOM05D005469 ORTHO05D001701 9.2e-10 66.6 128 30.5
BcaB05g21713 Brassica carinata HOM05D005469 ORTHO05D001701 1.2e-09 66.2 134 31.3
CAN.G1268.13 Capsicum annuum HOM05D005469 ORTHO05D001701 1.2e-09 66.2 45 57.8
Peaxi162Scf00045g02525 Petunia axillaris HOM05D000087 ORTHO05D000793 1.2e-09 66.2 45 60.0
CsaV3_5G010340 Cucumis sativus L. HOM05D005469 ORTHO05D001701 2.1e-09 65.5 128 31.2
DCAR_024812 Daucus carota HOM05D005469 ORTHO05D001701 2.1e-09 65.5 46 63.0
Lsat_1_v5_gn_2_124321 Lactuca sativa HOM05D005469 ORTHO05D001701 2.7e-09 65.1 127 29.9
Sopen06g016860 Solanum pennellii HOM05D005469 ORTHO05D001701 2.7e-09 65.1 130 30.8
Sp6g37350 Schrenkiella parvula HOM05D005469 ORTHO05D001701 3.5e-09 64.7 134 32.1
AT5G05500 Arabidopsis thaliana HOM05D005469 ORTHO05D001701 6.0e-09 63.9 49 55.1
CARHR207770 Cardamine hirsuta HOM05D005469 ORTHO05D001701 6.0e-09 63.9 49 55.1
BcaC06g32261 Brassica carinata HOM05D005469 ORTHO05D001701 7.8e-09 63.5 49 57.1
A10p30770 Brassica napus HOM05D005469 ORTHO05D001701 7.8e-09 63.5 49 57.1
C09p71260 Brassica napus HOM05D005469 ORTHO05D001701 7.8e-09 63.5 49 57.1
BolC9t59887H Brassica oleracea HOM05D005469 ORTHO05D001701 7.8e-09 63.5 49 57.1
BraA10t45118Z Brassica rapa HOM05D005469 ORTHO05D001701 7.8e-09 63.5 49 57.1
BcaC06g32262 Brassica carinata HOM05D005469 ORTHO05D001701 3.9e-08 61.2 49 53.1
AL6G15390 Arabidopsis lyrata HOM05D005469 ORTHO05D001701 5.1e-08 60.8 49 53.1
BraA02t04851Z Brassica rapa HOM05D005469 ORTHO05D001701 5.1e-08 60.8 49 53.1
Thhalv10014798m.g Eutrema salsugineum HOM05D005469 ORTHO05D001701 5.1e-08 60.8 49 53.1
DCAR_011836 Daucus carota HOM05D005469 ORTHO05D001701 6.6e-08 60.5 134 31.3
RcHm_v2.0_Chr1g0370801 Rosa chinensis HOM05D005469 ORTHO05D001701 8.7e-08 60.1 46 56.5
BcaB05g21714 Brassica carinata HOM05D005469 ORTHO05D001701 1.1e-07 59.7 49 53.1
BolC2t06202H Brassica oleracea HOM05D005469 ORTHO05D001701 1.1e-07 59.7 49 53.1
Medtr5g014340 Medicago truncatula HOM05D005469 ORTHO05D001701 1.5e-07 59.3 107 34.6
C02p02370 Brassica napus HOM05D005469 ORTHO05D001701 1.9e-07 58.9 49 51.0
ATR0174G015 Amborella trichopoda HOM05D005469 ORTHO05D001701 2.5e-07 58.5 129 33.3
arahy.Tifrunner.gnm1.ann1.NV82FA Arachis hypogaea HOM05D005469 ORTHO05D001701 2.5e-07 58.5 121 33.9
Sed0020461 Sechium edule HOM05D005469 ORTHO05D001701 2.5e-07 58.5 43 55.8
FvH4_7g24910 Fragaria vesca HOM05D005469 ORTHO05D001701 4.3e-07 57.8 46 52.2
FAN01G2198 Fragaria x ananassa HOM05D005469 ORTHO05D001701 4.3e-07 57.8 46 52.2
FAN10G0251 Fragaria x ananassa HOM05D005469 ORTHO05D001701 4.3e-07 57.8 46 52.2
COL.COLO4_03830 Corchorus olitorius HOM05D005469 ORTHO05D001701 9.6e-07 56.6 38 60.5
FAN03G1502 Fragaria x ananassa HOM05D005469 ORTHO05D001701 9.6e-07 56.6 46 52.2
RcHm_v2.0_Chr1g0370791 Rosa chinensis HOM05D005469 ORTHO05D001701 9.6e-07 56.6 44 54.5
Zm00001eb123470 Zea mays HOM05D005469 ORTHO05D001701 2.8e-06 55.1 48 47.9
Os01g0164075 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 6.2e-06 53.9 46 52.2


User provided reference genes

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