Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015120 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.9e-62 241.9 138 100.0
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.2e-57 225.7 130 99.2
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 8.5e-46 187.2 128 82.0
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 2.1e-44 182.6 130 77.7
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 8.0e-44 180.6 127 78.7
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 8.8e-43 177.2 150 70.7
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.6e-42 175.6 110 80.9
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 3.7e-41 171.8 129 69.8
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 4.8e-41 171.4 107 82.2
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 6.3e-41 171.0 127 74.8
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 8.3e-41 170.6 125 76.8
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.4e-40 169.9 129 78.3
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 2.4e-40 169.1 130 73.1
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 5.4e-40 167.9 110 78.2
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 2.7e-39 165.6 129 65.9
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 2.7e-39 165.6 132 72.7
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 4.5e-39 164.9 110 73.6
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 4.5e-39 164.9 128 73.4
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 1.0e-38 163.7 110 74.5
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 1.7e-38 162.9 110 71.8
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 2.2e-38 162.5 130 70.0
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 2.2e-38 162.5 124 68.5
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 5.0e-38 161.4 128 69.5
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 5.0e-38 161.4 128 69.5
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 6.5e-38 161.0 128 72.7
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 6.5e-38 161.0 128 72.7
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 8.5e-38 160.6 128 72.7
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.1e-37 160.2 130 69.2
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 1.5e-37 159.8 128 68.0
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 1.9e-37 159.5 130 70.0
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.9e-37 159.5 130 70.0
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 3.2e-37 158.7 128 68.0
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 3.2e-37 158.7 126 73.8
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 1.2e-36 156.8 110 70.9
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 1.2e-36 156.8 110 70.9
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.6e-36 156.4 130 62.3
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 2.7e-36 155.6 128 73.4
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 4.7e-36 154.8 96 79.2
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 8.0e-36 154.1 109 74.3
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.0e-35 153.7 129 61.2
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.4e-35 153.3 128 69.5
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 1.8e-35 152.9 128 64.1
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 2.3e-35 152.5 129 66.7
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 3.0e-35 152.1 129 69.0
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 3.0e-35 152.1 131 69.5
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 4.0e-35 151.8 131 64.1
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 6.8e-35 151.0 128 68.0
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 8.8e-35 150.6 131 69.5
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 2.0e-34 149.4 94 77.7
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 3.4e-34 148.7 147 60.5
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 4.4e-34 148.3 102 70.6
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 4.4e-34 148.3 94 80.9
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 4.4e-34 148.3 127 63.0
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 5.7e-34 147.9 131 61.1
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 5.7e-34 147.9 125 72.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 7.5e-34 147.5 127 62.2
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 9.8e-34 147.1 129 69.0
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 9.8e-34 147.1 129 67.4
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 2.2e-33 146.0 129 68.2
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 2.8e-33 145.6 95 75.8
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 8.3e-33 144.1 110 68.2
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 2.4e-32 142.5 110 67.3
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.4e-32 142.5 97 76.3
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 4.1e-32 141.7 110 66.4
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 5.4e-32 141.4 96 74.0
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 9.1e-32 140.6 110 67.3
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.6e-31 139.8 110 65.5
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.6e-31 139.8 128 61.7
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 2.7e-31 139.0 96 72.9
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 5.0e-30 134.8 110 64.5
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 5.0e-30 134.8 110 64.5
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 5.0e-30 134.8 110 64.5
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 5.0e-30 134.8 133 57.9
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 6.6e-30 134.4 110 63.6
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 8.6e-30 134.0 110 63.6
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.9e-29 132.9 111 63.1
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 1.9e-29 132.9 110 64.5
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 2.5e-29 132.5 137 56.2
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 4.2e-29 131.7 106 65.1
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.2e-29 131.7 97 62.9
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 4.2e-29 131.7 130 56.9
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 9.5e-29 130.6 130 67.7
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 2.1e-28 129.4 131 64.9
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 1.0e-27 127.1 127 63.8
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 2.3e-27 125.9 105 67.6
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 3.0e-27 125.6 96 65.6
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 5.2e-27 124.8 112 61.6
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 6.8e-27 124.4 107 72.9
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 7.5e-26 120.9 128 55.5
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 9.8e-26 120.6 110 59.1
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 1.4e-24 116.7 130 63.1
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.0e-23 112.8 128 49.2
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 2.7e-23 112.5 94 60.6
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 3.9e-22 108.6 97 54.6
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 8.6e-22 107.5 100 54.0
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 2.5e-21 105.9 99 60.6
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 2.5e-21 105.9 111 56.8
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.0e-19 100.5 77 67.5
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 2.0e-18 96.3 57 78.9
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 5.8e-18 94.7 71 71.8
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 5.8e-18 94.7 112 54.5
Os02g0606100 Oryza sativa ssp. japonica HOM05D005198 ORTHO05D006839 6.4e-17 91.3 110 52.7
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 2.0e-15 86.3 141 44.7
BolC2t09126H Brassica oleracea HOM05D005198 ORTHO05D042013 3.5e-15 85.5 130 46.2
C02p30710 Brassica napus HOM05D005198 ORTHO05D042013 7.8e-15 84.3 130 45.4
Lj4A14T51 Lonicera japonica HOM05D005198 ORTHO05D006839 1.4e-08 63.5 58 72.4
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 1.9e-08 63.2 61 63.9
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 3.2e-08 62.4 119 34.5
Medtr2g088350 Medicago truncatula HOM05D000088 ORTHO05D000830 4.6e-07 58.5 100 37.0
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 2.3e-06 56.2 130 31.5


User provided reference genes

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