Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015116 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 1.4e-67 259.6 146 100.0
CSS0035071 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 5.3e-62 241.1 146 84.2
CSS0029028 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 1.5e-61 239.6 146 93.2
CSS0047509 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 1.5e-61 239.6 146 83.6
CSS0050269 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 7.9e-58 227.3 146 82.2
CSS0036493 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 3.5e-50 201.8 146 84.9
CSS0010138 Camellia sinensis var. sinensis HOM05D000570 ORTHO05D001174 9.6e-48 193.7 130 81.5
CSS0005489 Camellia sinensis var. sinensis HOM05D000570 ORTHO05D001174 1.1e-35 153.7 130 61.5
CSS0037529 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 1.4e-35 153.3 146 69.9
Oeu013830.1 Olea europaea HOM05D000570 ORTHO05D001174 1.4e-30 136.7 131 55.7
Hma1.2p1_0298F.1_g117490 Hydrangea macrophylla HOM05D000570 ORTHO05D001174 1.0e-28 130.6 133 66.9
Lj1A1235G87 Lonicera japonica HOM05D000570 ORTHO05D001174 1.7e-28 129.8 131 59.5
vmacro15803 Vaccinium macrocarpon HOM05D000570 ORTHO05D001174 1.2e-26 123.6 124 66.9
PGSC0003DMG400016709 Solanum tuberosum HOM05D000570 ORTHO05D001174 4.7e-26 121.7 131 56.5
CAN.G1014.44 Capsicum annuum HOM05D000570 ORTHO05D001174 1.0e-25 120.6 131 56.5
DCAR_024985 Daucus carota HOM05D000570 ORTHO05D001174 2.3e-25 119.4 132 63.6
Solyc02g081070.4 Solanum lycopersicum HOM05D000570 ORTHO05D001174 3.0e-25 119.0 131 54.2
Sopen02g025740 Solanum pennellii HOM05D000570 ORTHO05D001174 3.0e-25 119.0 131 55.0
GSVIVG01004806001 Vitis vinifera HOM05D000570 ORTHO05D001174 6.7e-25 117.9 130 58.5
Rhsim02G0105000 Rhododendron simsii HOM05D000570 ORTHO05D001174 3.3e-24 115.5 131 63.4
TAR626G0159 Trochodendron aralioides HOM05D000570 ORTHO05D001174 7.4e-24 114.4 131 51.9
Actinidia39260 Actinidia chinensis HOM05D000570 ORTHO05D001174 2.8e-23 112.5 130 60.0
Lsat_1_v5_gn_7_15161 Lactuca sativa HOM05D000570 ORTHO05D001174 3.7e-23 112.1 130 50.8
MSTRG.14627 Avicennia marina HOM05D000570 ORTHO05D001174 6.3e-23 111.3 130 50.8
HanXRQChr05g0129311 Helianthus annuus HOM05D000570 ORTHO05D001174 1.4e-22 110.2 135 50.4
ECA236G0302 Erigeron canadensis HOM05D000570 ORTHO05D001174 3.1e-22 109.0 130 49.2
Cc09_g01270 Coffea canephora HOM05D000570 ORTHO05D001174 2.0e-21 106.3 129 54.3
Duzib235G1179 Durio zibethinus HOM05D000570 ORTHO05D001174 3.4e-21 105.5 138 47.8
Cpa.g.sc152.51 Carica papaya HOM05D000570 ORTHO05D001174 5.9e-21 104.8 124 54.0
HanXRQChr15g0470551 Helianthus annuus HOM05D000570 ORTHO05D001174 7.7e-21 104.4 130 53.1
Nitab4.5_0012576g0010 Nicotiana tabacum HOM05D000570 ORTHO05D001174 3.8e-20 102.1 129 55.0
Gorai.010G183400 Gossypium raimondii HOM05D000570 ORTHO05D001174 4.2e-19 98.6 128 48.4
SGA_v2.0_scaffold89G27483 Striga asiatica HOM05D000570 ORTHO05D001174 4.2e-19 98.6 139 49.6
Atru.chr10.2275 Acer truncatum HOM05D000570 ORTHO05D001174 7.2e-19 97.8 133 44.4
Thecc.06G227500 Theobroma cacao HOM05D000570 ORTHO05D001174 7.2e-19 97.8 131 51.9
COL.COLO4_31827 Corchorus olitorius HOM05D000570 ORTHO05D001174 9.4e-19 97.4 131 47.3
Gohir.A06G150700 Gossypium hirsutum HOM05D000570 ORTHO05D001174 9.4e-19 97.4 128 48.4
Gohir.D06G156900 Gossypium hirsutum HOM05D000570 ORTHO05D001174 1.2e-18 97.1 128 49.2
TPR.G12988 Trifolium pratense HOM05D000570 ORTHO05D001174 1.2e-18 97.1 126 49.2
Lalb_Chr20g0118921 Lupinus albus HOM05D000570 ORTHO05D001174 3.6e-18 95.5 125 46.4
Migut.H01588 Erythranthe guttata HOM05D000570 ORTHO05D001174 4.7e-18 95.1 130 45.4
Ciclev10014418m.g Citrus clementina HOM05D000570 ORTHO05D001174 8.0e-18 94.4 129 55.0
MD10G1326000 Malus domestica HOM05D000570 ORTHO05D001174 1.0e-17 94.0 129 48.1
Nitab4.5_0001409g0210 Nicotiana tabacum HOM05D000570 ORTHO05D001174 3.0e-17 92.4 118 56.8
Sabra11G0008000 Salix brachista HOM05D000570 ORTHO05D001174 6.7e-17 91.3 121 45.5
Peaxi162Scf00178g00216 Petunia axillaris HOM05D000570 ORTHO05D001174 2.6e-16 89.4 120 51.7
CANSAT56G2530 Cannabis sativa HOM05D000570 ORTHO05D001174 7.4e-16 87.8 129 45.7
Gohir.A10G011100 Gossypium hirsutum HOM05D000570 ORTHO05D001174 9.7e-16 87.4 131 52.7
MD05G1351900 Malus domestica HOM05D000570 ORTHO05D001174 9.7e-16 87.4 129 45.0
PSO210G6440 Papaver somniferum HOM05D000570 ORTHO05D001174 2.8e-15 85.9 133 42.1
Sc05g0009430 Simmondsia chinensis HOM05D000570 ORTHO05D001174 8.2e-15 84.3 130 47.7
Gorai.011G011800 Gossypium raimondii HOM05D000570 ORTHO05D001174 1.8e-14 83.2 131 53.4
PSO832G2605 Papaver somniferum HOM05D000570 ORTHO05D001174 1.8e-14 83.2 133 40.6
QL05p072009 Quercus lobata HOM05D000570 ORTHO05D001174 1.8e-14 83.2 128 43.0
Manes.16G003200 Manihot esculenta HOM05D000570 ORTHO05D001174 2.4e-14 82.8 105 48.6
Lalb_Chr15g0087741 Lupinus albus HOM05D000570 ORTHO05D001174 1.2e-13 80.5 125 51.2
Potri.004G005301 Populus trichocarpa HOM05D000570 ORTHO05D001174 1.2e-13 80.5 124 44.4
SGA_v2.0_scaffold49G18250 Striga asiatica HOM05D000570 ORTHO05D001174 1.2e-13 80.5 120 42.5
FAN21G0433 Fragaria x ananassa HOM05D000570 ORTHO05D001174 1.6e-13 80.1 109 45.0
Gohir.D10G010700 Gossypium hirsutum HOM05D000570 ORTHO05D001174 2.6e-13 79.3 131 51.1
FvH4_3g01460 Fragaria vesca HOM05D000570 ORTHO05D001174 3.5e-13 79.0 109 45.0
Phvul.006G146100 Phaseolus vulgaris HOM05D000570 ORTHO05D001174 4.5e-13 78.6 140 37.9
Hund21434 Selenicereus undatus HOM05D000570 ORTHO05D001174 5.9e-13 78.2 146 34.2
Aqoxy1G03467 Aquilegia oxysepala HOM05D000570 ORTHO05D001174 1.0e-12 77.4 121 44.6
QL02p081725 Quercus lobata HOM05D017261 ORTHO05D015793 1.3e-12 77.0 75 52.0
Glyma.15G111600 Glycine max HOM05D000570 ORTHO05D001174 1.7e-12 76.6 132 39.4
Os02g0190500 Oryza sativa ssp. japonica HOM05D000570 ORTHO05D001174 1.7e-12 76.6 135 37.8
Potri.011G010500 Populus trichocarpa HOM05D000570 ORTHO05D001174 2.2e-12 76.3 113 41.6
TAR624G1309 Trochodendron aralioides HOM05D000570 ORTHO05D001174 2.9e-12 75.9 108 46.3
PGR004G0535 Punica granatum HOM05D000570 ORTHO05D001174 3.8e-12 75.5 110 46.4
Ah.09g234550 Amaranthus hybridus HOM05D000570 ORTHO05D001174 1.1e-11 73.9 113 40.7
CsaV3_1G046110 Cucumis sativus L. HOM05D000570 ORTHO05D001174 1.1e-11 73.9 128 39.8
MBI19_g45795_MAGBIO Magnolia biondii HOM05D000570 ORTHO05D001174 1.1e-11 73.9 96 46.9
Haze_06852 Corylus avellana HOM05D000570 ORTHO05D001174 1.5e-11 73.6 112 46.4
THA.LOC104813393 Tarenaya hassleriana HOM05D000570 ORTHO05D001174 1.5e-11 73.6 126 40.5
HPP92_010492 Vanilla planifolia HOM05D004528 ORTHO05D005815 1.5e-11 73.6 143 42.7
Lj6g0005851 Lotus japonicus HOM05D000570 ORTHO05D001174 3.2e-11 72.4 126 51.6
Zm00001eb234920 Zea mays HOM05D000570 ORTHO05D001174 3.2e-11 72.4 136 37.5
TWI38G1871 Tripterygium wilfordii HOM05D000570 ORTHO05D001174 7.2e-11 71.2 109 53.2
Lsat_1_v5_gn_0_22980 Lactuca sativa HOM05D000570 ORTHO05D001174 9.4e-11 70.9 116 41.4
Sabra04G0002700 Salix brachista HOM05D000570 ORTHO05D001174 9.4e-11 70.9 122 40.2
ATR0686G143 Amborella trichopoda HOM05D000570 ORTHO05D015793 1.6e-10 70.1 137 37.2
CDE04G0812 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 2.1e-10 69.7 129 36.4
THA.LOC104812980 Tarenaya hassleriana HOM05D000570 ORTHO05D001174 2.7e-10 69.3 125 39.2
RcHm_v2.0_Chr5g0002301 Rosa chinensis HOM05D000570 ORTHO05D001174 4.7e-10 68.6 116 42.2
Ca_00690_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 6.7e-09 64.7 108 47.2
CARHR044040 Cardamine hirsuta HOM05D000570 ORTHO05D001174 2.0e-08 63.2 125 36.8
CDE06G1424 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 2.6e-08 62.8 127 35.4
Medtr2g024330 Medicago truncatula HOM05D000570 ORTHO05D001174 2.6e-08 62.8 113 41.6
VMungo0540G1870 Vigna mungo HOM05D000570 ORTHO05D001174 2.6e-08 62.8 125 44.8
Zm00001eb275550 Zea mays HOM05D000570 ORTHO05D001174 2.6e-08 62.8 135 34.8
CiPaw.10G074100 Carya illinoinensis HOM05D000570 ORTHO05D001174 7.5e-08 61.2 109 40.4
Hund05695 Selenicereus undatus HOM05D000570 ORTHO05D001174 1.3e-07 60.5 138 31.2
Hund23438 Selenicereus undatus HOM05D000570 ORTHO05D001174 1.3e-07 60.5 34 67.6
FAN25G3172 Fragaria x ananassa HOM05D000570 ORTHO05D001174 2.2e-07 59.7 111 43.2
Prupe.4G015700 Prunus persica HOM05D000570 ORTHO05D001174 2.2e-07 59.7 118 41.5
ATR0693G317 Amborella trichopoda HOM05D000570 ORTHO05D002740 2.8e-07 59.3 118 32.2
RcHm_v2.0_Chr2g0148621 Rosa chinensis HOM05D000570 ORTHO05D001174 3.7e-07 58.9 113 35.4
HPP92_012346 Vanilla planifolia HOM05D000570 ORTHO05D002740 6.3e-07 58.2 118 34.7
Hund01113 Selenicereus undatus HOM05D000570 ORTHO05D002740 8.2e-07 57.8 177 28.8
Thhalv10020162m.g Eutrema salsugineum HOM05D000570 ORTHO05D001174 1.4e-06 57.0 123 39.8
AL7G31560 Arabidopsis lyrata HOM05D000570 ORTHO05D001174 5.3e-06 55.1 106 38.7
SEGI_17819 Sequoiadendron giganteum HOM05D000570 ORTHO05D001174 5.3e-06 55.1 120 37.5
HPP92_010491 Vanilla planifolia HOM05D000570 ORTHO05D001174 5.3e-06 55.1 83 50.6
Os07g0618400 Oryza sativa ssp. japonica HOM05D000570 ORTHO05D001174 9.1e-06 54.3 39 59.0


User provided reference genes

Program Settings