Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 7.9e-38 159.8 75 100.0
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 2.9e-24 114.8 51 96.1
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 5.0e-24 114.0 54 88.9
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 6.5e-24 113.6 51 96.1
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 1.1e-23 112.8 50 94.0
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 1.1e-23 112.8 51 96.1
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 1.4e-23 112.5 52 92.3
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 1.9e-23 112.1 51 94.1
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 1.9e-23 112.1 51 94.1
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 2.5e-23 111.7 51 94.1
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 4.2e-23 110.9 51 94.1
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 4.2e-23 110.9 51 92.2
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 4.2e-23 110.9 51 94.1
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 5.5e-23 110.5 51 92.2
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 5.5e-23 110.5 51 92.2
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 5.5e-23 110.5 51 92.2
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 7.2e-23 110.2 51 90.2
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 9.4e-23 109.8 63 74.6
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 9.4e-23 109.8 51 92.2
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 1.2e-22 109.4 51 90.2
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 1.6e-22 109.0 51 90.2
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 1.6e-22 109.0 51 90.2
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 1.6e-22 109.0 51 90.2
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 2.1e-22 108.6 51 90.2
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 2.7e-22 108.2 51 90.2
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 2.7e-22 108.2 51 88.2
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 2.7e-22 108.2 50 90.0
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 2.7e-22 108.2 51 88.2
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 3.6e-22 107.8 51 90.2
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 3.6e-22 107.8 51 90.2
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 3.6e-22 107.8 51 92.2
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 4.7e-22 107.5 50 90.0
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 4.7e-22 107.5 51 88.2
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 6.1e-22 107.1 51 88.2
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 6.1e-22 107.1 51 88.2
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 6.1e-22 107.1 51 88.2
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 6.1e-22 107.1 51 88.2
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 8.0e-22 106.7 51 90.2
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 8.0e-22 106.7 51 88.2
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 8.0e-22 106.7 51 90.2
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 1.0e-21 106.3 51 92.2
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 1.0e-21 106.3 51 92.2
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 1.0e-21 106.3 51 86.3
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 1.0e-21 106.3 51 88.2
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 1.4e-21 105.9 51 86.3
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.4e-21 105.9 51 88.2
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 1.8e-21 105.5 50 88.0
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 1.8e-21 105.5 51 90.2
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 1.8e-21 105.5 51 86.3
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 2.3e-21 105.1 51 88.2
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 2.3e-21 105.1 51 88.2
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 3.0e-21 104.8 51 84.3
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 3.9e-21 104.4 51 86.3
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 3.9e-21 104.4 51 86.3
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 5.2e-21 104.0 50 88.0
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 5.2e-21 104.0 51 86.3
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 5.2e-21 104.0 51 86.3
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 5.2e-21 104.0 51 86.3
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 8.8e-21 103.2 51 84.3
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 8.8e-21 103.2 51 84.3
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 8.8e-21 103.2 51 86.3
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 8.8e-21 103.2 51 84.3
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 8.8e-21 103.2 51 86.3
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 1.1e-20 102.8 50 86.0
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 1.5e-20 102.4 51 84.3
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 1.5e-20 102.4 51 84.3
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 2.6e-20 101.7 51 84.3
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 7.4e-20 100.1 51 80.4
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 2.2e-19 98.6 51 84.3
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 8.2e-19 96.7 48 81.2
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 1.8e-18 95.5 51 78.4
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 1.6e-17 92.4 51 74.5
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 3.8e-16 87.8 51 72.5
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 3.8e-16 87.8 51 70.6
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 1.1e-15 86.3 51 68.6
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.0e-13 79.7 60 63.3
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 1.5e-12 75.9 34 85.3


User provided reference genes

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