Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015071 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 1.3e-29 132.1 57 100.0
CSS0024709 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.7e-13 76.6 38 84.2
CSS0020371 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 3.3e-12 74.3 38 81.6
CSS0029867 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 3.3e-12 74.3 38 78.9
CSS0034383 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 2.8e-11 71.2 81 48.1
CSS0003710 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.3e-11 70.1 38 76.3
CSS0027501 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.3e-11 70.1 38 76.3
CSS0041149 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.3e-11 70.1 38 78.9
CSS0041641 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.9e-10 66.6 38 76.3
CSS0037876 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D026485 2.0e-09 65.1 30 90.0
CSS0026662 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 4.5e-09 63.9 38 71.1
CSS0015420 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 5.9e-09 63.5 38 68.4
CSS0025948 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 5.9e-09 63.5 38 76.3
CSS0030302 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 5.9e-09 63.5 38 76.3
Dinv16025 Davidia involucrata HOM05D000026 ORTHO05D000127 1.3e-08 62.4 47 59.6
Actinidia02407 Actinidia chinensis HOM05D000026 ORTHO05D000127 1.7e-08 62.0 38 71.1
Actinidia02408 Actinidia chinensis HOM05D000026 ORTHO05D000127 2.9e-08 61.2 66 54.5
HanXRQChr03g0075881 Helianthus annuus HOM05D000026 ORTHO05D000127 2.9e-08 61.2 38 71.1
Oeu063557.2 Olea europaea HOM05D000026 ORTHO05D000127 3.8e-08 60.8 38 65.8
CSS0006444 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.5e-08 60.1 38 71.1
Ciclev10028014m.g Citrus clementina HOM05D000026 ORTHO05D000127 8.5e-08 59.7 38 60.5
FvH4_3g19390 Fragaria vesca HOM05D000026 ORTHO05D000127 1.4e-07 58.9 38 60.5
FvH4_5g13890 Fragaria vesca HOM05D000026 ORTHO05D000127 1.4e-07 58.9 38 60.5
FAN11G0412 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.4e-07 58.9 38 60.5
FAN25G0565 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.4e-07 58.9 38 60.5
FAN25G2241 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.4e-07 58.9 38 60.5
RcHm_v2.0_Chr5g0032541 Rosa chinensis HOM05D000026 ORTHO05D000127 1.4e-07 58.9 49 53.1
FAN11G1043 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.9e-07 58.5 38 60.5
Hma1.2p1_0908F.1_g235620 Hydrangea macrophylla HOM05D000026 ORTHO05D000127 1.9e-07 58.5 38 65.8
vmacro01887 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 1.9e-07 58.5 49 61.2
FAN21G2376 Fragaria x ananassa HOM05D000026 ORTHO05D000127 2.5e-07 58.2 38 60.5
Hma1.2p1_0908F.1_g235610 Hydrangea macrophylla HOM05D000026 ORTHO05D000127 3.2e-07 57.8 38 63.2
Prupe.4G175700 Prunus persica HOM05D000026 ORTHO05D000127 3.2e-07 57.8 38 60.5
Dinv08979 Davidia involucrata HOM05D000026 ORTHO05D000127 4.2e-07 57.4 38 63.2
Dinv16022 Davidia involucrata HOM05D000026 ORTHO05D000127 4.2e-07 57.4 38 65.8
RcHm_v2.0_Chr5g0032461 Rosa chinensis HOM05D000026 ORTHO05D000127 4.2e-07 57.4 37 59.5
Eucgr.G01017 Eucalyptus grandis HOM05D000026 ORTHO05D000127 5.5e-07 57.0 38 63.2
Dinv08978 Davidia involucrata HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 63.2
Dinv08981 Davidia involucrata HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 63.2
FvH4_3g19400 Fragaria vesca HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 57.9
FAN16G2798 Fragaria x ananassa HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 57.9
HanXRQChr03g0066471 Helianthus annuus HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 65.8
Lj9C346T10 Lonicera japonica HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 60.5
MD03G1232900 Malus domestica HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 57.9
MD03G1233100 Malus domestica HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 57.9
Prupe.4G174900 Prunus persica HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 60.5
RcHm_v2.0_Chr5g0032591 Rosa chinensis HOM05D000026 ORTHO05D000127 7.2e-07 56.6 38 57.9
Actinidia00316 Actinidia chinensis HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 63.2
Dinv08973 Davidia involucrata HOM05D000026 ORTHO05D000127 9.4e-07 56.2 37 64.9
FvH4_3g39140 Fragaria vesca HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 57.9
FAN21G3758 Fragaria x ananassa HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 57.9
FAN25G3506 Fragaria x ananassa HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 57.9
Hma1.2p1_0908F.1_g235650 Hydrangea macrophylla HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 65.8
MD03G1233700 Malus domestica HOM05D000026 ORTHO05D000127 9.4e-07 56.2 37 59.5
Manes.07G045700 Manihot esculenta HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 63.2
Prupe.4G174800 Prunus persica HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 55.3
Prupe.4G175100 Prunus persica HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 55.3
Prupe.4G241200 Prunus persica HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 60.5
QL11p028427 Quercus lobata HOM05D000026 ORTHO05D000127 9.4e-07 56.2 38 60.5
Dinv08976 Davidia involucrata HOM05D000026 ORTHO05D000127 1.2e-06 55.8 38 60.5
FAN21G2636 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.2e-06 55.8 38 55.3
Hma1.2p1_0026F.1_g016435 Hydrangea macrophylla HOM05D000026 ORTHO05D000127 1.2e-06 55.8 37 64.9
MD03G1234300 Malus domestica HOM05D000026 ORTHO05D000127 1.2e-06 55.8 38 57.9
MD11G1254300 Malus domestica HOM05D000026 ORTHO05D000127 1.2e-06 55.8 38 55.3
Eucgr.L01021 Eucalyptus grandis HOM05D000026 ORTHO05D000127 1.6e-06 55.5 38 63.2
Eucgr.L02638 Eucalyptus grandis HOM05D000026 ORTHO05D000127 1.6e-06 55.5 38 60.5
FAN21G2206 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.6e-06 55.5 38 60.5
MBI16_g12299_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D000127 1.6e-06 55.5 38 63.2
MD03G1233600 Malus domestica HOM05D000026 ORTHO05D000127 1.6e-06 55.5 38 57.9
Dinv08980 Davidia involucrata HOM05D000026 ORTHO05D000127 2.1e-06 55.1 38 60.5
Hma1.2p1_0026F.1_g016700 Hydrangea macrophylla HOM05D000026 ORTHO05D000127 2.7e-06 54.7 38 60.5
MD11G1255100 Malus domestica HOM05D000026 ORTHO05D000127 2.7e-06 54.7 38 57.9
RcHm_v2.0_Chr5g0032631 Rosa chinensis HOM05D000026 ORTHO05D000127 2.7e-06 54.7 38 57.9
RcHm_v2.0_Chr6g0274701 Rosa chinensis HOM05D000026 ORTHO05D000127 2.7e-06 54.7 55 45.5
Aqoxy1G03896 Aquilegia oxysepala HOM05D000026 ORTHO05D000127 3.6e-06 54.3 38 57.9
MD03G1234600 Malus domestica HOM05D000026 ORTHO05D000127 3.6e-06 54.3 38 60.5
MD11G1254900 Malus domestica HOM05D000026 ORTHO05D000127 3.6e-06 54.3 38 57.9
Dinv16026 Davidia involucrata HOM05D000026 ORTHO05D000127 4.7e-06 53.9 38 57.9
MD03G1233900 Malus domestica HOM05D000026 ORTHO05D000127 4.7e-06 53.9 38 52.6
Manes.07G047900 Manihot esculenta HOM05D000026 ORTHO05D000127 4.7e-06 53.9 38 57.9
Prupe.4G175300 Prunus persica HOM05D000026 ORTHO05D000127 4.7e-06 53.9 38 52.6
RcHm_v2.0_Chr1g0340931 Rosa chinensis HOM05D000026 ORTHO05D000127 4.7e-06 53.9 38 55.3
RcHm_v2.0_Chr2g0151141 Rosa chinensis HOM05D000026 ORTHO05D000127 4.7e-06 53.9 36 55.6
CSS0013861 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 6.1e-06 53.5 38 63.2
Dinv16015 Davidia involucrata HOM05D000026 ORTHO05D000127 6.1e-06 53.5 61 47.5
FvH4_3g19361 Fragaria vesca HOM05D000026 ORTHO05D000127 6.1e-06 53.5 38 55.3
FAN11G3276 Fragaria x ananassa HOM05D000026 ORTHO05D000127 6.1e-06 53.5 38 55.3
HanXRQChr08g0213931 Helianthus annuus HOM05D000026 ORTHO05D000127 6.1e-06 53.5 38 63.2
MD03G1234100 Malus domestica HOM05D000026 ORTHO05D000127 6.1e-06 53.5 47 51.1
Manes.10G095000 Manihot esculenta HOM05D000026 ORTHO05D000127 6.1e-06 53.5 38 60.5
Prupe.4G175000 Prunus persica HOM05D000026 ORTHO05D000127 6.1e-06 53.5 38 57.9
arahy.Tifrunner.gnm1.ann1.50LAX6 Arachis hypogaea HOM05D000026 ORTHO05D000127 7.9e-06 53.1 33 66.7
MSTRG.23407 Avicennia marina HOM05D000026 ORTHO05D000127 7.9e-06 53.1 38 63.2
CiPaw.07G043600 Carya illinoinensis HOM05D000026 ORTHO05D000127 7.9e-06 53.1 38 55.3
Eucgr.G01016 Eucalyptus grandis HOM05D000026 ORTHO05D000127 7.9e-06 53.1 38 57.9
FAN12G0518 Fragaria x ananassa HOM05D000026 ORTHO05D000127 7.9e-06 53.1 38 55.3
RcHm_v2.0_Chr5g0032101 Rosa chinensis HOM05D000026 ORTHO05D000127 7.9e-06 53.1 38 57.9
TAR098G0002 Trochodendron aralioides HOM05D000026 ORTHO05D000127 7.9e-06 53.1 38 63.2


User provided reference genes

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