Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 3.9e-37 157.5 75 100.0
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 7.2e-23 110.2 74 73.0
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 5.2e-21 104.0 73 69.9
CSS0023045 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 1.1e-20 102.8 74 74.3
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 7.4e-20 100.1 73 71.2
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 3.7e-19 97.8 73 68.5
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 1.8e-18 95.5 72 68.1
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 2.4e-18 95.1 51 84.3
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 3.1e-18 94.7 72 63.9
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 7.7e-17 90.1 72 61.1
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 1.5e-15 85.9 72 59.7
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 4.2e-15 84.3 74 55.4
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 4.2e-15 84.3 64 64.1
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 5.5e-15 84.0 73 53.4
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 7.2e-15 83.6 73 60.3
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 9.4e-15 83.2 74 51.4
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 2.1e-14 82.0 73 53.4
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 3.6e-14 81.3 73 50.7
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 3.6e-14 81.3 71 54.9
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 1.4e-13 79.3 61 62.3
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 3.0e-13 78.2 69 52.2
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 3.0e-13 78.2 69 52.2
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 3.0e-13 78.2 69 52.2
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 1.2e-12 76.3 73 56.2
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 1.2e-12 76.3 71 53.5
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 1.5e-12 75.9 62 59.7
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 2.0e-12 75.5 68 57.4
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 2.0e-12 75.5 69 50.7
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 5.7e-12 73.9 55 54.5
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 9.7e-12 73.2 51 62.7
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 1.7e-11 72.4 69 53.6
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.2e-11 72.0 48 64.6
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 2.8e-11 71.6 73 47.9
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 4.8e-11 70.9 74 50.0
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 8.3e-11 70.1 51 54.9
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 1.1e-10 69.7 49 61.2
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 1.1e-10 69.7 71 46.5
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.4e-10 69.3 72 48.6
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.8e-10 68.9 65 50.8
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 3.1e-10 68.2 45 62.2
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 3.1e-10 68.2 48 60.4
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 3.1e-10 68.2 48 60.4
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 3.1e-10 68.2 48 60.4
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 7.0e-10 67.0 67 47.8
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 9.1e-10 66.6 47 59.6
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.2e-09 66.2 57 45.6
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 1.2e-09 66.2 72 47.2
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 1.6e-09 65.9 61 50.8
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 2.0e-09 65.5 75 44.0
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 2.7e-09 65.1 50 58.0
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 4.5e-09 64.3 48 56.2
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 7.7e-09 63.5 75 44.0
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 1.0e-08 63.2 75 42.7
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 2.9e-08 61.6 78 43.6
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 2.9e-08 61.6 46 56.5
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 2.5e-07 58.5 73 46.6
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 2.5e-07 58.5 45 55.6
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 2.5e-07 58.5 48 52.1
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 2.5e-07 58.5 71 46.5
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 3.2e-07 58.2 70 44.3
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 4.2e-07 57.8 46 52.2
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 4.2e-07 57.8 51 49.0
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 7.2e-07 57.0 65 41.5
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.2e-06 56.2 73 42.5
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 2.1e-06 55.5 61 49.2
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 4.7e-06 54.3 74 40.5
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 6.1e-06 53.9 47 53.2


User provided reference genes

Program Settings