Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014989 Camellia sinensis var. sinensis HOM05D003063 ORTHO05D003242 2.4e-67 258.8 141 100.0
CSS0003630 Camellia sinensis var. sinensis HOM05D003063 ORTHO05D003242 1.7e-57 226.1 126 96.8
Actinidia16426 Actinidia chinensis HOM05D002283 ORTHO05D008228 7.4e-37 157.5 124 72.6
Rhsim08G0093400 Rhododendron simsii HOM05D003063 ORTHO05D003242 9.0e-35 150.6 116 71.6
Cpa.g.sc6.14 Carica papaya HOM05D003063 ORTHO05D003242 9.7e-29 130.6 124 57.3
Cfa004133 Carpinus fangiana HOM05D003401 ORTHO05D003906 6.9e-27 124.4 124 54.0
CiPaw.01G004400 Carya illinoinensis HOM05D003063 ORTHO05D003242 1.3e-25 120.2 124 54.8
Lj7A98G7 Lonicera japonica HOM05D003063 ORTHO05D003242 2.2e-25 119.4 136 51.5
Sc07g0000540 Simmondsia chinensis HOM05D003063 ORTHO05D003242 1.1e-24 117.1 121 52.9
TAR381G1137 Trochodendron aralioides HOM05D003063 ORTHO05D003242 1.9e-24 116.3 105 60.0
TWI73G0373 Tripterygium wilfordii HOM05D003063 ORTHO05D003242 2.1e-23 112.8 128 52.3
EL10Ac6g15616 Beta vulgaris HOM05D003063 ORTHO05D003242 7.9e-23 110.9 116 50.9
Ah.02g125400 Amaranthus hybridus HOM05D003063 ORTHO05D003242 1.0e-22 110.5 124 48.4
Gohir.A11G214800 Gossypium hirsutum HOM05D003063 ORTHO05D003242 2.3e-22 109.4 128 48.4
GSVIVG01002076001 Vitis vinifera HOM05D003063 ORTHO05D003242 2.3e-22 109.4 123 50.4
Gohir.D11G208600 Gossypium hirsutum HOM05D003063 ORTHO05D003242 3.0e-22 109.0 128 48.4
Gorai.007G223600 Gossypium raimondii HOM05D003063 ORTHO05D003242 3.0e-22 109.0 128 48.4
Nitab4.5_0002119g0070 Nicotiana tabacum HOM05D003063 ORTHO05D003242 3.9e-22 108.6 119 50.4
MD02G1186300 Malus domestica HOM05D003063 ORTHO05D003242 5.1e-22 108.2 123 50.4
THA.LOC104827634 Tarenaya hassleriana HOM05D003063 ORTHO05D003242 8.8e-22 107.5 133 46.6
Duzib147G1538 Durio zibethinus HOM05D003063 ORTHO05D003242 1.5e-21 106.7 111 53.2
Sp2g29100 Schrenkiella parvula HOM05D003063 ORTHO05D003242 2.6e-21 105.9 123 49.6
Dinv26934 Davidia involucrata HOM05D003063 ORTHO05D003242 3.3e-21 105.5 86 65.1
PGR102G0884 Punica granatum HOM05D003063 ORTHO05D003242 3.3e-21 105.5 112 51.8
Thhalv10005509m.g Eutrema salsugineum HOM05D003063 ORTHO05D003242 4.4e-21 105.1 128 46.1
Peaxi162Scf00548g00615 Petunia axillaris HOM05D003063 ORTHO05D003242 5.7e-21 104.8 120 50.0
A02p44150 Brassica napus HOM05D003063 ORTHO05D003242 1.3e-20 103.6 124 47.6
BraA02t09338Z Brassica rapa HOM05D003063 ORTHO05D003242 1.3e-20 103.6 124 47.6
BcaB04g20046 Brassica carinata HOM05D003063 ORTHO05D003242 1.7e-20 103.2 128 46.9
FAN19G2514 Fragaria x ananassa HOM05D003063 ORTHO05D003242 1.7e-20 103.2 124 47.6
C02p64410 Brassica napus HOM05D003063 ORTHO05D003242 2.2e-20 102.8 124 46.8
BolC2t12505H Brassica oleracea HOM05D003063 ORTHO05D003242 2.2e-20 102.8 124 46.8
C09p10860 Brassica napus HOM05D003063 ORTHO05D003242 2.8e-20 102.4 128 46.1
QL06p039562 Quercus lobata HOM05D003063 ORTHO05D003242 6.3e-20 101.3 124 47.6
RcHm_v2.0_Chr2g0108061 Rosa chinensis HOM05D003063 ORTHO05D003242 8.2e-20 100.9 126 47.6
BcaC04g23234 Brassica carinata HOM05D003063 ORTHO05D003242 1.1e-19 100.5 128 46.1
A09p09280 Brassica napus HOM05D003063 ORTHO05D003242 1.1e-19 100.5 128 45.3
Sopen02g036900 Solanum pennellii HOM05D003063 ORTHO05D003242 1.1e-19 100.5 124 46.8
FAN23G1757 Fragaria x ananassa HOM05D003063 ORTHO05D003242 1.4e-19 100.1 124 46.8
Nitab4.5_0000142g0080 Nicotiana tabacum HOM05D003063 ORTHO05D003242 3.1e-19 99.0 143 43.4
CAN.G1075.39 Capsicum annuum HOM05D003063 ORTHO05D003242 1.2e-18 97.1 124 45.2
Ciclev10027120m.g Citrus clementina HOM05D003063 ORTHO05D003242 1.2e-18 97.1 124 45.2
Cc07_g07110 Coffea canephora HOM05D003063 ORTHO05D003242 1.2e-18 97.1 123 44.7
Migut.H00346 Erythranthe guttata HOM05D003063 ORTHO05D003242 1.2e-18 97.1 122 46.7
Phvul.002G010500 Phaseolus vulgaris HOM05D003063 ORTHO05D003242 1.2e-18 97.1 124 44.4
Lj2g0021519 Lotus japonicus HOM05D003063 ORTHO05D003242 1.5e-18 96.7 124 45.2
Hund13953 Selenicereus undatus HOM05D003063 ORTHO05D003242 1.5e-18 96.7 106 49.1
Solyc02g092340.2 Solanum lycopersicum HOM05D003063 ORTHO05D003242 2.0e-18 96.3 124 45.2
VMungo1215G2377 Vigna mungo HOM05D003063 ORTHO05D003242 2.6e-18 95.9 124 44.4
AL8G43750 Arabidopsis lyrata HOM05D003063 ORTHO05D003242 3.4e-18 95.5 123 43.1
Prupe.6G220300 Prunus persica HOM05D003063 ORTHO05D003242 3.4e-18 95.5 124 45.2
Oeu011986.1 Olea europaea HOM05D003063 ORTHO05D003242 4.5e-18 95.1 124 46.0
Carub.0008s2692 Capsella rubella HOM05D003063 ORTHO05D003242 5.9e-18 94.7 123 43.9
AT5G67550 Arabidopsis thaliana HOM05D003063 ORTHO05D003242 7.7e-18 94.4 123 43.1
MBI16_g23887_MAGBIO Magnolia biondii HOM05D003063 ORTHO05D003242 1.7e-17 93.2 123 45.5
Atru.chr3.1013 Acer truncatum HOM05D003063 ORTHO05D003242 2.9e-17 92.4 133 41.4
BraA09t36581Z Brassica rapa HOM05D003063 ORTHO05D003242 8.5e-17 90.9 118 43.2
CARHR280040 Cardamine hirsuta HOM05D003063 ORTHO05D003242 1.1e-16 90.5 118 42.4
ECA232G0232 Erigeron canadensis HOM05D003063 ORTHO05D003242 1.4e-16 90.1 127 39.4
PSO541G1933 Papaver somniferum HOM05D003063 ORTHO05D003242 1.9e-16 89.7 123 42.3
PSO675G8643 Papaver somniferum HOM05D003063 ORTHO05D003242 3.2e-16 89.0 123 42.3
arahy.Tifrunner.gnm1.ann1.7H1L6U Arachis hypogaea HOM05D003063 ORTHO05D003242 1.6e-15 86.7 123 43.1
Glyma.11G047500 Glycine max HOM05D003063 ORTHO05D003242 3.6e-15 85.5 124 42.7
Lsat_1_v5_gn_4_161620 Lactuca sativa HOM05D003063 ORTHO05D003242 7.9e-15 84.3 121 40.5
SGA_v2.0_scaffold15G07460 Striga asiatica HOM05D003063 ORTHO05D003242 7.9e-15 84.3 113 44.2
Aa31LG1G16100 Aethionema arabicum HOM05D003063 ORTHO05D003242 1.4e-14 83.6 102 42.2
Manes.12G114901 Manihot esculenta HOM05D003063 ORTHO05D003242 8.8e-14 80.9 110 42.7
TPR.G9937 Trifolium pratense HOM05D003063 ORTHO05D003242 1.1e-13 80.5 124 40.3
HanXRQChr12g0373031 Helianthus annuus HOM05D003063 ORTHO05D003242 1.5e-13 80.1 119 39.5
Aqoxy6G02607 Aquilegia oxysepala HOM05D003063 ORTHO05D003242 2.0e-13 79.7 123 39.8
FvH4_1g17750 Fragaria vesca HOM05D003063 ORTHO05D003242 3.3e-13 79.0 98 43.9
COL.COLO4_11579 Corchorus olitorius HOM05D003063 ORTHO05D003242 4.4e-13 78.6 85 50.6
Lalb_Chr09g0323611 Lupinus albus HOM05D003063 ORTHO05D003242 3.7e-12 75.5 138 39.9
Psat2g171600 Pisum sativum HOM05D003063 ORTHO05D003242 6.3e-12 74.7 118 38.1
Haze_15281 Corylus avellana HOM05D003063 ORTHO05D003242 1.1e-11 73.9 86 48.8
SEGI_41356 Sequoiadendron giganteum HOM05D003063 ORTHO05D003242 1.2e-10 70.5 147 34.7
Medtr5g015390 Medicago truncatula HOM05D003063 ORTHO05D003242 8.5e-09 64.3 124 36.3
ATR0743G154 Amborella trichopoda HOM05D003063 ORTHO05D003242 3.2e-08 62.4 114 34.2
CiPaw.01G095400 Carya illinoinensis HOM05D003063 ORTHO05D003242 1.8e-06 56.6 141 32.6
Potri.017G023400 Populus trichocarpa HOM05D003063 ORTHO05D003242 1.8e-06 56.6 124 33.9


User provided reference genes

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