Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.9e-104 382.5 192 100.0
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 3.4e-53 212.2 136 80.1
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.0e-52 210.7 135 80.7
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.6e-50 203.4 133 77.4
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.0e-49 199.1 133 75.2
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.0e-48 196.4 133 72.9
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 3.3e-48 195.7 121 80.2
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 3.3e-48 195.7 135 72.6
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 4.4e-48 195.3 131 74.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 9.7e-48 194.1 133 72.9
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.2e-47 193.0 138 71.0
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.7e-47 192.2 135 74.1
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 8.2e-47 191.0 133 72.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.1e-46 190.7 133 70.7
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.4e-46 190.3 131 72.5
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.4e-46 190.3 131 73.3
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.8e-46 189.9 133 72.9
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 3.1e-46 189.1 135 72.6
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 3.1e-46 189.1 133 72.2
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 7.0e-46 188.0 138 69.6
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 9.1e-46 187.6 160 66.2
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 2.0e-45 186.4 130 69.2
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 4.5e-45 185.3 134 70.1
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 7.7e-45 184.5 135 71.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 2.9e-44 182.6 130 70.0
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 5.0e-44 181.8 133 69.2
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 5.0e-44 181.8 133 69.2
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 5.0e-44 181.8 130 70.0
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 6.5e-44 181.4 133 69.9
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 8.5e-44 181.0 131 68.7
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 8.5e-44 181.0 135 67.4
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.1e-43 180.6 131 70.2
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.9e-43 179.9 130 69.2
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.9e-43 179.9 130 68.5
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 2.5e-43 179.5 122 73.8
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.5e-43 179.5 134 67.2
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 3.2e-43 179.1 129 70.5
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 3.2e-43 179.1 127 67.7
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 4.2e-43 178.7 124 71.0
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 7.2e-43 177.9 129 68.2
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.2e-42 177.2 128 70.3
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.2e-42 177.2 133 67.7
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 3.6e-42 175.6 119 73.1
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 4.7e-42 175.3 131 67.2
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 4.7e-42 175.3 122 68.0
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 6.1e-42 174.9 124 69.4
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.4e-41 173.7 128 68.0
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.4e-41 173.7 128 67.2
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.3e-41 172.9 128 64.1
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 3.9e-41 172.2 131 65.6
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.9e-41 172.2 143 65.0
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 3.9e-41 172.2 125 68.0
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 5.2e-41 171.8 128 66.4
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.1e-40 170.6 126 65.9
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 2.0e-40 169.9 130 65.4
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.6e-40 169.5 130 64.6
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 2.6e-40 169.5 130 64.6
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 2.6e-40 169.5 162 59.3
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 2.6e-40 169.5 123 69.1
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 4.4e-40 168.7 133 65.4
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.7e-39 166.8 153 58.2
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 6.3e-39 164.9 133 60.9
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 1.4e-38 163.7 122 68.0
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.4e-38 162.9 128 65.6
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 2.4e-38 162.9 122 66.4
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 9.1e-38 161.0 130 63.8
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 2.0e-37 159.8 114 70.2
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 2.6e-37 159.5 119 66.4
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 3.5e-37 159.1 122 66.4
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 3.5e-37 159.1 152 57.9
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 4.5e-37 158.7 119 67.2
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.7e-37 157.9 151 57.0
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.0e-36 157.5 111 70.3
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.3e-36 157.1 124 63.7
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 2.2e-36 156.4 120 65.8
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 5.0e-36 155.2 119 63.9
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 6.5e-36 154.8 127 60.6
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 6.5e-36 154.8 126 61.9
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.1e-35 154.1 130 60.8
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 3.2e-35 152.5 124 60.5
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 3.2e-35 152.5 124 60.5
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 3.2e-35 152.5 124 60.5
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 5.5e-35 151.8 122 62.3
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 7.2e-35 151.4 126 61.1
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 7.2e-35 151.4 118 61.0
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.2e-34 150.6 124 61.3
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.2e-34 150.6 171 52.6
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 2.3e-33 146.4 125 60.0
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 1.3e-31 140.6 111 63.1
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.8e-31 139.4 126 56.3
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.4e-30 137.1 118 57.6
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 7.0e-30 134.8 121 57.0
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 7.0e-30 134.8 121 57.0
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 4.5e-29 132.1 133 53.4
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 7.7e-29 131.3 112 59.8
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.5e-27 127.1 133 52.6
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 4.0e-25 119.0 84 70.2
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 6.8e-25 118.2 95 61.1
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.5e-24 117.1 129 48.1
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 5.7e-24 115.2 114 49.1
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 1.7e-23 113.6 120 45.8
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 4.8e-23 112.1 83 69.9
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.8e-22 110.2 120 45.8
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 1.8e-22 110.2 118 44.9
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 3.1e-22 109.4 70 77.1
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 2.3e-20 103.2 76 67.1
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 2.3e-20 103.2 77 66.2
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 2.9e-20 102.8 120 44.2
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 6.6e-20 101.7 86 62.8
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 6.6e-20 101.7 70 71.4
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 7.5e-16 88.2 54 79.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 5.0e-12 75.5 53 67.9
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 8.6e-12 74.7 51 68.6
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 5.6e-11 72.0 56 66.1
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 4.7e-10 68.9 44 75.0
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 4.0e-09 65.9 60 58.3


User provided reference genes

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