Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014964 Camellia sinensis var. sinensis HOM05D006800 ORTHO05D008478 2.8e-126 455.3 230 100.0
vmacro11823 Vaccinium macrocarpon HOM05D006800 ORTHO05D008478 1.7e-91 339.7 213 81.2
Dinv22373 Davidia involucrata HOM05D006800 ORTHO05D008478 6.5e-91 337.8 213 79.8
Rhsim06G0194400 Rhododendron simsii HOM05D006800 ORTHO05D008478 2.1e-89 332.8 215 78.6
Rhsim06G0193900 Rhododendron simsii HOM05D006800 ORTHO05D008478 8.0e-89 330.9 213 78.9
Cfa020530 Carpinus fangiana HOM05D006800 ORTHO05D008478 5.3e-85 318.2 214 75.2
Hma1.2p1_1274F.1_g271940 Hydrangea macrophylla HOM05D006800 ORTHO05D008478 7.0e-85 317.8 210 76.2
Manes.03G114600 Manihot esculenta HOM05D006800 ORTHO05D008478 2.0e-84 316.2 213 74.6
CiPaw.12G122000 Carya illinoinensis HOM05D006800 ORTHO05D008478 2.2e-83 312.8 214 74.8
Ciclev10008220m.g Citrus clementina HOM05D006800 ORTHO05D008478 8.5e-83 310.8 214 72.4
Potri.001G404700 Populus trichocarpa HOM05D006800 ORTHO05D008478 2.5e-82 309.3 207 74.9
GSVIVG01014408001 Vitis vinifera HOM05D006800 ORTHO05D008478 4.2e-82 308.5 213 72.3
Sabra16G0266000 Salix brachista HOM05D006800 ORTHO05D008478 1.2e-81 307.0 207 73.9
QL08p019137 Quercus lobata HOM05D006800 ORTHO05D008478 1.0e-80 303.9 214 73.4
DCAR_013080 Daucus carota HOM05D006800 ORTHO05D008478 5.2e-80 301.6 204 73.0
TWI39G0599 Tripterygium wilfordii HOM05D006800 ORTHO05D008478 5.2e-80 301.6 198 73.2
TAR674G0003 Trochodendron aralioides HOM05D006800 ORTHO05D008478 2.6e-79 299.3 214 73.4
Atru.chr2.2809 Acer truncatum HOM05D006800 ORTHO05D008478 4.4e-79 298.5 207 72.9
Gohir.A11G282747 Gossypium hirsutum HOM05D006800 ORTHO05D008478 2.2e-78 296.2 195 75.4
Prupe.4G187400 Prunus persica HOM05D006800 ORTHO05D008478 2.2e-78 296.2 216 71.8
Hma1.2p1_2417F.1_g321750 Hydrangea macrophylla HOM05D006800 ORTHO05D008478 3.7e-78 295.4 217 71.4
Gorai.007G319400 Gossypium raimondii HOM05D006800 ORTHO05D008478 8.2e-78 294.3 195 74.9
Gohir.D11G296300 Gossypium hirsutum HOM05D006800 ORTHO05D008478 1.1e-77 293.9 195 74.9
Nitab4.5_0001610g0020 Nicotiana tabacum HOM05D006800 ORTHO05D008478 1.4e-77 293.5 196 74.5
Thecc.07G074700 Theobroma cacao HOM05D006800 ORTHO05D008478 2.4e-77 292.7 192 77.1
MD03G1222300 Malus domestica HOM05D006800 ORTHO05D008478 4.1e-77 292.0 204 73.5
Cpa.g.sc80.97 Carica papaya HOM05D006800 ORTHO05D008478 7.0e-77 291.2 215 70.2
Duzib268G1025 Durio zibethinus HOM05D006800 ORTHO05D008478 7.0e-77 291.2 191 75.4
Nitab4.5_0000662g0050 Nicotiana tabacum HOM05D006800 ORTHO05D008478 9.1e-77 290.8 196 75.0
Peaxi162Scf00000g00497 Petunia axillaris HOM05D006800 ORTHO05D008478 9.1e-77 290.8 211 72.0
RcHm_v2.0_Chr5g0034961 Rosa chinensis HOM05D006800 ORTHO05D008478 9.1e-77 290.8 223 69.1
Sed0026398 Sechium edule HOM05D006800 ORTHO05D008478 1.2e-76 290.4 213 67.6
PGR083G0724 Punica granatum HOM05D006800 ORTHO05D008478 2.0e-76 289.7 183 77.6
FvH4_3g20740 Fragaria vesca HOM05D006800 ORTHO05D008478 2.7e-76 289.3 213 71.4
Cc05_g12540 Coffea canephora HOM05D006800 ORTHO05D008478 4.5e-76 288.5 205 71.2
MELO3C016542.2 Cucumis melo HOM05D006800 ORTHO05D008478 4.5e-76 288.5 211 69.2
CsaV3_3G006070 Cucumis sativus L. HOM05D006800 ORTHO05D008478 7.7e-76 287.7 212 68.4
THA.LOC104818055 Tarenaya hassleriana HOM05D006800 ORTHO05D008478 7.7e-76 287.7 204 73.5
FAN25G0840 Fragaria x ananassa HOM05D006800 ORTHO05D008478 1.0e-75 287.3 214 71.0
Eucgr.F01089 Eucalyptus grandis HOM05D006800 ORTHO05D008478 3.8e-75 285.4 192 73.4
Ciclev10008058m.g Citrus clementina HOM05D006800 ORTHO05D008478 1.1e-74 283.9 255 58.8
Aa31LG8G2760 Aethionema arabicum HOM05D006800 ORTHO05D008478 1.5e-74 283.5 196 74.5
Sc16g0006830 Simmondsia chinensis HOM05D006800 ORTHO05D008478 1.9e-74 283.1 214 67.3
Sp3g13780 Schrenkiella parvula HOM05D006800 ORTHO05D008478 3.2e-74 282.3 196 73.5
AUR62029335 Chenopodium quinoa HOM05D006800 ORTHO05D008478 7.2e-74 281.2 214 66.8
Migut.H01913 Erythranthe guttata HOM05D006800 ORTHO05D008478 9.4e-74 280.8 182 76.4
Carub.0003s1525 Capsella rubella HOM05D006800 ORTHO05D008478 3.6e-73 278.9 214 66.4
ClCG10G006680 Citrullus lanatus HOM05D006800 ORTHO05D008478 4.7e-73 278.5 209 67.5
Thhalv10020685m.g Eutrema salsugineum HOM05D006800 ORTHO05D008478 4.7e-73 278.5 202 70.8
AT3G15520 Arabidopsis thaliana HOM05D006800 ORTHO05D008478 6.1e-73 278.1 198 71.7
SalBow7G3299 Salvia bowleyana HOM05D006800 ORTHO05D008478 6.1e-73 278.1 185 74.6
Sopen12g006940 Solanum pennellii HOM05D006800 ORTHO05D008478 6.1e-73 278.1 204 70.1
AL3G28100 Arabidopsis lyrata HOM05D006800 ORTHO05D008478 8.0e-73 277.7 196 73.0
PSO541G1958 Papaver somniferum HOM05D006800 ORTHO05D008478 1.0e-72 277.3 203 72.4
Solyc12g013580.3 Solanum lycopersicum HOM05D006800 ORTHO05D008478 1.4e-72 276.9 204 69.6
Lsat_1_v5_gn_9_95880 Lactuca sativa HOM05D006800 ORTHO05D008478 1.8e-72 276.6 202 68.3
PSO675G5315 Papaver somniferum HOM05D006800 ORTHO05D008478 3.0e-72 275.8 203 71.9
MSTRG.14374 Avicennia marina HOM05D006800 ORTHO05D008478 5.2e-72 275.0 185 74.6
CANSAT11G1341 Cannabis sativa HOM05D006800 ORTHO05D008478 5.2e-72 275.0 192 72.4
CAN.G433.18 Capsicum annuum HOM05D006800 ORTHO05D008478 6.8e-72 274.6 193 73.6
PGSC0003DMG400008569 Solanum tuberosum HOM05D006800 ORTHO05D008478 8.8e-72 274.2 204 69.6
BcaB06g29587 Brassica carinata HOM05D006800 ORTHO05D008478 1.2e-71 273.9 197 71.1
BcaC05g28965 Brassica carinata HOM05D006800 ORTHO05D008478 2.6e-71 272.7 193 72.5
CARHR090580 Cardamine hirsuta HOM05D006800 ORTHO05D008478 3.4e-71 272.3 196 70.9
EL10Ac4g08093 Beta vulgaris HOM05D006800 ORTHO05D008478 1.3e-70 270.4 184 72.8
SGA_v2.0_scaffold9G04949 Striga asiatica HOM05D006800 ORTHO05D008478 1.7e-70 270.0 185 74.1
AUR62015625 Chenopodium quinoa HOM05D006800 ORTHO05D008478 2.2e-70 269.6 199 67.8
Hund15928 Selenicereus undatus HOM05D006800 ORTHO05D008478 4.8e-70 268.5 202 67.8
HPP92_001820 Vanilla planifolia HOM05D006800 ORTHO05D008478 6.3e-70 268.1 199 67.3
COL.COLO4_03558 Corchorus olitorius HOM05D006800 ORTHO05D008478 8.3e-70 267.7 196 71.4
ECA240G3736 Erigeron canadensis HOM05D006800 ORTHO05D008478 8.3e-70 267.7 177 75.1
Atru.chr2.2798 Acer truncatum HOM05D006800 ORTHO05D008478 1.4e-69 266.9 214 64.5
BolC5t33848H Brassica oleracea HOM05D006800 ORTHO05D008478 3.1e-69 265.8 201 69.7
BraA05t22211Z Brassica rapa HOM05D006800 ORTHO05D008478 4.1e-69 265.4 201 69.7
FAN11G0427 Fragaria x ananassa HOM05D006800 ORTHO05D008478 1.3e-67 260.4 186 72.6
C05p51600 Brassica napus HOM05D006800 ORTHO05D008478 2.3e-67 259.6 193 70.5
A05p33890 Brassica napus HOM05D006800 ORTHO05D008478 2.9e-67 259.2 193 70.5
HanXRQChr10g0289501 Helianthus annuus HOM05D006800 ORTHO05D008478 8.6e-67 257.7 202 65.3
Lalb_Chr19g0134361 Lupinus albus HOM05D006800 ORTHO05D008478 7.2e-66 254.6 217 62.7
FAN16G0832 Fragaria x ananassa HOM05D006800 ORTHO05D008478 9.5e-66 254.2 186 71.5
Phvul.011G148100 Phaseolus vulgaris HOM05D006800 ORTHO05D008478 4.7e-65 251.9 192 69.3
unitig_899.g15558 Utricularia gibba HOM05D006800 ORTHO05D008478 8.9e-64 247.7 200 63.0
Ah.06g183750 Amaranthus hybridus HOM05D006800 ORTHO05D008478 1.5e-63 246.9 161 72.7
VMungo1127G1600 Vigna mungo HOM05D006800 ORTHO05D008478 1.3e-62 243.8 192 66.7
Haze_09503 Corylus avellana HOM05D006800 ORTHO05D008478 2.8e-62 242.7 244 56.6
CDE02G3099 Ceratophyllum demersum HOM05D006800 ORTHO05D008478 4.9e-62 241.9 204 60.3
Glyma.12G148600 Glycine max HOM05D006800 ORTHO05D008478 8.3e-62 241.1 194 68.0
SEGI_03689 Sequoiadendron giganteum HOM05D006800 ORTHO05D008478 1.1e-61 240.7 184 65.2
Ca_23043_v3 Cicer arietinum L. HOM05D006800 ORTHO05D008478 1.8e-61 240.0 203 64.0
Lj3g0016801 Lotus japonicus HOM05D006800 ORTHO05D008478 2.4e-61 239.6 182 68.7
Os07g0565600 Oryza sativa ssp. japonica HOM05D006800 ORTHO05D008478 4.1e-61 238.8 189 65.1
ATR0693G395 Amborella trichopoda HOM05D006800 ORTHO05D008478 2.0e-60 236.5 202 61.9
Nn1g03972 Nelumbo nucifera HOM05D006800 ORTHO05D008478 3.5e-60 235.7 200 64.0
Zm00001eb107080 Zea mays HOM05D006800 ORTHO05D008478 3.5e-60 235.7 188 64.4
Psat7g032000 Pisum sativum HOM05D006800 ORTHO05D008478 5.9e-60 235.0 193 64.2
Medtr8g059435 Medicago truncatula HOM05D006800 ORTHO05D008478 2.3e-59 233.0 179 68.2
TPR.G29364 Trifolium pratense HOM05D006800 ORTHO05D008478 2.1e-57 226.5 193 61.7
Glyma.06G249300 Glycine max HOM05D006800 ORTHO05D008478 1.3e-54 217.2 189 64.0
arahy.Tifrunner.gnm1.ann1.F90IWS Arachis hypogaea HOM05D006800 ORTHO05D008478 1.7e-54 216.9 192 61.5
arahy.Tifrunner.gnm1.ann1.6T6X8W Arachis hypogaea HOM05D006800 ORTHO05D008478 6.4e-54 214.9 192 61.5
Pp3c13_22210 Physcomitrium patens HOM05D006800 ORTHO05D008478 1.3e-51 207.2 190 55.8
Pp3c3_20400 Physcomitrium patens HOM05D006800 ORTHO05D008478 2.3e-51 206.5 175 58.9
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 8.6e-51 204.5 185 60.0
Mapoly0082s0064 Marchantia polymorpha HOM05D006800 ORTHO05D008478 8.0e-49 198.0 182 54.9
SMO367G0771 Selaginella moellendorffii HOM05D006800 ORTHO05D008478 8.3e-46 188.0 180 55.6
Oeu055670.1 Olea europaea HOM05D006800 ORTHO05D008478 1.4e-45 187.2 157 66.2
CBR_g19822 Chara braunii HOM05D006800 ORTHO05D008478 1.1e-42 177.6 155 56.8
Atru.chr2.2794 Acer truncatum HOM05D006800 ORTHO05D008478 3.7e-38 162.5 100 83.0
Hma1.2p1_2417F.1_g321760 Hydrangea macrophylla HOM05D006800 ORTHO05D008478 6.4e-38 161.8 106 78.3
Cre06.g303300 Chlamydomonas reinhardtii HOM05D006800 ORTHO05D008478 2.0e-23 113.6 162 42.0
MCO05G047 Micromonas commoda HOM05D006800 ORTHO05D008478 4.9e-22 109.0 161 37.9
Atru.chr2.2807 Acer truncatum HOM05D006800 ORTHO05D008478 8.4e-22 108.2 164 43.3
Lj1A850T65 Lonicera japonica HOM05D006800 ORTHO05D008478 1.1e-18 97.8 65 76.9
Atru.chr2.2775 Acer truncatum HOM05D006800 ORTHO05D008478 5.6e-18 95.5 73 68.5
RcHm_v2.0_Chr5g0034911 Rosa chinensis HOM05D006800 ORTHO05D008478 3.8e-14 82.8 62 69.4
ATR0730G054 Amborella trichopoda HOM05D004777 ORTHO05D006240 2.0e-07 60.5 153 32.0
Pp3c26_630 Physcomitrium patens HOM05D004777 ORTHO05D006240 2.6e-07 60.1 182 26.9
SEGI_33645 Sequoiadendron giganteum HOM05D004777 ORTHO05D006240 4.5e-07 59.3 165 29.1
MELO3C009952.2 Cucumis melo HOM05D004777 ORTHO05D006240 1.7e-06 57.4 153 31.4
Eucgr.I01816 Eucalyptus grandis HOM05D004777 ORTHO05D006240 2.2e-06 57.0 180 23.9
Pp3c9_660 Physcomitrium patens HOM05D004777 ORTHO05D006240 3.8e-06 56.2 202 24.3
ClCG10G014260 Citrullus lanatus HOM05D004777 ORTHO05D006240 4.9e-06 55.8 184 29.3
CsaV3_3G042370 Cucumis sativus L. HOM05D004777 ORTHO05D006240 6.4e-06 55.5 153 30.7
Hund02275 Selenicereus undatus HOM05D004777 ORTHO05D006240 6.4e-06 55.5 186 29.0


User provided reference genes

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