Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 6.8e-96 354.0 177 100.0
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 6.8e-96 354.0 177 100.0
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.8e-88 329.3 179 95.5
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 4.7e-57 224.9 184 67.9
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 5.2e-56 221.5 183 67.2
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 7.8e-52 207.6 180 66.7
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 2.5e-50 202.6 118 82.2
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.5e-50 202.6 180 63.3
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.5e-50 202.6 180 63.3
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 3.6e-49 198.7 165 65.5
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 6.2e-49 198.0 179 63.1
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 8.1e-49 197.6 113 86.7
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 8.1e-49 197.6 180 63.9
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 1.4e-48 196.8 133 75.9
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 1.8e-48 196.4 130 75.4
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.1e-48 195.7 152 68.4
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 4.0e-48 195.3 182 63.2
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 5.2e-48 194.9 182 61.5
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 8.9e-48 194.1 146 66.4
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.5e-47 193.4 125 77.6
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 2.0e-47 193.0 153 68.0
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 3.4e-47 192.2 154 68.8
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 3.4e-47 192.2 182 62.1
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 3.4e-47 192.2 126 73.8
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 5.8e-47 191.4 125 78.4
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 7.6e-47 191.0 157 66.2
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 7.6e-47 191.0 185 61.6
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 1.3e-46 190.3 192 58.9
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 3.8e-46 188.7 114 83.3
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 4.9e-46 188.3 123 77.2
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 8.4e-46 187.6 123 77.2
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 1.1e-45 187.2 175 61.1
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 1.4e-45 186.8 165 61.8
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 2.4e-45 186.0 138 65.9
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 2.4e-45 186.0 105 87.6
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 3.2e-45 185.7 181 58.0
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 5.4e-45 184.9 117 76.1
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 1.2e-44 183.7 124 75.0
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 2.1e-44 183.0 138 65.9
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 3.5e-44 182.2 127 70.9
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 4.6e-44 181.8 128 68.8
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 4.6e-44 181.8 127 69.3
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 6.0e-44 181.4 103 84.5
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 7.8e-44 181.0 127 70.9
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 1.3e-43 180.3 138 64.5
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 1.3e-43 180.3 138 64.5
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.3e-43 180.3 140 65.0
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 1.3e-43 180.3 147 63.9
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.7e-43 179.9 104 79.8
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 2.3e-43 179.5 122 73.0
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 3.0e-43 179.1 113 77.0
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 3.0e-43 179.1 187 56.1
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.9e-43 178.7 120 76.7
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 5.1e-43 178.3 170 57.1
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 6.6e-43 177.9 138 63.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 6.6e-43 177.9 113 76.1
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 8.7e-43 177.6 142 63.4
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 8.7e-43 177.6 138 62.3
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 8.7e-43 177.6 111 79.3
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 8.7e-43 177.6 136 64.0
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 1.5e-42 176.8 111 78.4
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.5e-42 176.8 111 79.3
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 1.5e-42 176.8 122 71.3
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.9e-42 176.4 105 80.0
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 2.5e-42 176.0 122 71.3
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 2.5e-42 176.0 148 67.6
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 2.5e-42 176.0 148 67.6
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 2.5e-42 176.0 148 67.6
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 2.5e-42 176.0 186 56.5
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 4.3e-42 175.3 151 60.9
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 4.3e-42 175.3 220 51.4
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 5.6e-42 174.9 115 73.0
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 5.6e-42 174.9 187 53.5
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 7.3e-42 174.5 127 64.6
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 9.6e-42 174.1 159 60.4
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 1.3e-41 173.7 188 55.9
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 1.3e-41 173.7 117 72.6
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 2.1e-41 172.9 128 68.0
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 4.8e-41 171.8 127 67.7
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 6.2e-41 171.4 138 65.9
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 6.2e-41 171.4 106 74.5
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 6.2e-41 171.4 106 74.5
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 8.1e-41 171.0 151 60.9
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.4e-40 170.2 130 66.2
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.4e-40 170.2 111 70.3
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 2.4e-40 169.5 162 58.0
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 2.4e-40 169.5 126 67.5
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 2.4e-40 169.5 110 74.5
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 4.0e-40 168.7 126 69.0
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 6.9e-40 167.9 145 62.8
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 1.5e-39 166.8 100 78.0
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 4.4e-39 165.2 102 76.5
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.3e-38 163.7 113 69.9
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.4e-37 160.2 87 89.7
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 5.4e-37 158.3 88 85.2
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 4.6e-36 155.2 102 70.6
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 6.0e-36 154.8 91 81.3
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 7.3e-34 147.9 101 64.4
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.2e-31 140.6 89 77.5
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.6e-28 130.2 120 52.5
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.6e-28 130.2 120 52.5
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 2.7e-28 129.4 100 58.0
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 2.3e-27 126.3 120 49.2
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.3e-25 120.6 113 52.2
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.9e-13 80.1 53 69.8


User provided reference genes

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