Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 3.6e-51 204.5 95 100.0
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 5.1e-50 200.7 95 97.9
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 1.5e-38 162.5 87 85.1
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 2.5e-36 155.2 96 77.1
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 9.4e-36 153.3 90 83.3
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 3.0e-34 148.3 86 77.9
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 3.3e-33 144.8 90 76.7
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 1.7e-32 142.5 96 72.9
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 4.8e-32 141.0 96 69.8
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.4e-31 138.7 92 70.7
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 3.1e-31 138.3 104 64.4
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 3.1e-31 138.3 97 70.1
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 4.1e-31 137.9 96 66.7
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 9.1e-31 136.7 95 69.5
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 4.5e-30 134.4 69 81.2
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 5.9e-30 134.0 94 66.0
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 1.0e-29 133.3 94 68.1
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 3.8e-29 131.3 99 62.6
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.8e-29 131.3 69 79.7
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 3.8e-29 131.3 69 79.7
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 5.0e-29 131.0 92 70.7
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.1e-28 129.8 89 70.8
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 1.5e-28 129.4 84 70.2
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.5e-28 129.4 90 70.0
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 1.5e-28 129.4 95 65.3
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.5e-28 129.4 94 62.8
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 1.9e-28 129.0 94 66.0
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 2.5e-28 128.6 84 70.2
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 2.5e-28 128.6 88 68.2
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.2e-27 126.3 94 61.7
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.2e-27 126.3 74 75.7
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 1.6e-27 125.9 87 64.4
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.6e-27 125.9 82 70.7
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 2.1e-27 125.6 73 75.3
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 2.1e-27 125.6 75 74.7
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 2.1e-27 125.6 83 69.9
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 3.6e-27 124.8 70 75.7
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 3.6e-27 124.8 88 65.9
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 3.6e-27 124.8 71 74.6
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 3.6e-27 124.8 91 65.9
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 6.1e-27 124.0 73 74.0
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 6.1e-27 124.0 76 73.7
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 8.0e-27 123.6 88 69.3
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 8.0e-27 123.6 76 75.0
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 8.0e-27 123.6 90 65.6
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 8.0e-27 123.6 90 65.6
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.0e-26 123.2 78 71.8
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.8e-26 122.5 88 67.0
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 1.8e-26 122.5 61 85.2
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 2.3e-26 122.1 88 68.2
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 5.2e-26 120.9 75 70.7
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 6.7e-26 120.6 98 60.2
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 6.7e-26 120.6 76 73.7
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 8.8e-26 120.2 64 81.2
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.5e-25 119.4 76 72.4
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 4.4e-25 117.9 98 61.2
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 1.7e-24 115.9 75 66.7
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 1.7e-24 115.9 75 66.7
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.7e-24 115.9 73 68.5
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 2.8e-24 115.2 92 59.8
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 2.8e-24 115.2 89 61.8
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 4.8e-24 114.4 88 61.4
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 4.8e-24 114.4 78 66.7
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 4.8e-24 114.4 87 63.2
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 6.3e-24 114.0 73 72.6
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 6.3e-24 114.0 76 65.8
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 8.2e-24 113.6 62 77.4
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 1.1e-23 113.2 88 60.2
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.4e-23 112.8 88 61.4
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 1.8e-23 112.5 88 61.4
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 1.8e-23 112.5 87 62.1
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 1.8e-23 112.5 55 85.5
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 1.8e-23 112.5 55 85.5
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 2.4e-23 112.1 70 71.4
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 5.3e-23 110.9 68 67.6
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 5.3e-23 110.9 74 64.9
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 7.0e-23 110.5 93 59.1
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.2e-22 109.8 133 49.6
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.2e-22 109.8 92 56.5
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 2.0e-22 109.0 88 59.1
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 4.5e-22 107.8 82 61.0
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 5.9e-22 107.5 77 64.9
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 7.7e-22 107.1 68 69.1
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 1.3e-21 106.3 57 77.2
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 8.5e-21 103.6 119 43.7
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 1.5e-20 102.8 85 58.8
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.5e-20 102.8 85 60.0
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.5e-20 102.8 85 60.0
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 2.5e-20 102.1 88 59.1
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 3.2e-20 101.7 85 57.6
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 1.6e-19 99.4 56 69.6
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 1.6e-19 99.4 85 56.5
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 5.2e-18 94.4 101 50.5
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.2e-17 93.2 62 59.7
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.5e-17 92.8 59 71.2
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 1.5e-17 92.8 78 53.8
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 2.0e-17 92.4 65 63.1
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 2.0e-17 92.4 65 63.1
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 5.7e-17 90.9 84 47.6
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 1.1e-15 86.7 62 64.5
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 7.0e-15 84.0 72 47.2
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 2.0e-14 82.4 62 62.9
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.9e-13 78.6 64 56.2
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.9e-13 78.6 67 52.2
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 4.2e-12 74.7 63 55.6
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 7.5e-09 63.9 41 68.3
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 2.2e-08 62.4 40 70.0
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 4.9e-08 61.2 52 50.0
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 5.4e-07 57.8 65 36.9
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 1.2e-06 56.6 28 82.1
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 2.7e-06 55.5 28 82.1


User provided reference genes

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