Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 1.7e-59 232.6 116 100.0
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 1.6e-49 199.5 116 86.2
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 4.0e-48 194.9 114 85.1
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 2.6e-47 192.2 116 81.9
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 3.4e-47 191.8 114 83.3
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 7.5e-47 190.7 115 81.7
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 1.3e-46 189.9 116 80.2
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 1.7e-46 189.5 114 83.3
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 2.2e-46 189.1 114 81.6
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 2.9e-46 188.7 113 82.3
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 2.9e-46 188.7 114 81.6
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 3.7e-46 188.3 114 79.8
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 3.7e-46 188.3 114 79.8
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 3.7e-46 188.3 114 79.8
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 4.9e-46 188.0 114 82.5
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 8.3e-46 187.2 116 80.2
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 8.3e-46 187.2 116 79.3
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 1.1e-45 186.8 116 80.2
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 1.1e-45 186.8 116 78.4
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 1.9e-45 186.0 116 79.3
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 1.9e-45 186.0 116 80.2
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 1.9e-45 186.0 116 80.2
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 3.2e-45 185.3 114 80.7
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 3.2e-45 185.3 116 81.0
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 5.4e-45 184.5 116 78.4
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 5.4e-45 184.5 116 76.7
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 5.4e-45 184.5 116 78.4
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 7.1e-45 184.1 116 78.4
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 9.2e-45 183.7 116 77.6
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 1.2e-44 183.3 116 78.4
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 1.2e-44 183.3 114 77.2
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 1.6e-44 183.0 139 68.3
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 1.6e-44 183.0 139 68.3
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 1.6e-44 183.0 114 76.3
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 2.1e-44 182.6 114 78.1
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 2.1e-44 182.6 114 77.2
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 2.7e-44 182.2 116 79.3
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 2.7e-44 182.2 116 77.6
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 2.7e-44 182.2 116 77.6
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 3.5e-44 181.8 116 77.6
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 3.5e-44 181.8 114 77.2
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 4.6e-44 181.4 114 77.2
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 6.0e-44 181.0 115 78.3
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 6.0e-44 181.0 116 77.6
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 7.8e-44 180.6 121 76.0
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 7.8e-44 180.6 114 77.2
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 7.8e-44 180.6 116 77.6
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 2.3e-43 179.1 114 74.6
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 3.9e-43 178.3 114 78.9
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 3.9e-43 178.3 114 74.6
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 5.1e-43 177.9 116 76.7
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 6.6e-43 177.6 116 76.7
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 8.6e-43 177.2 116 77.6
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 8.6e-43 177.2 116 71.6
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 1.1e-42 176.8 115 74.8
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.5e-42 176.4 129 71.3
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.5e-42 176.4 129 71.3
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 1.5e-42 176.4 114 77.2
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 2.5e-42 175.6 116 76.7
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 3.3e-42 175.3 114 76.3
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 4.3e-42 174.9 114 77.2
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.3e-42 174.9 114 76.3
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 7.3e-42 174.1 121 76.0
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 7.3e-42 174.1 116 71.6
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 9.5e-42 173.7 113 78.8
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 9.5e-42 173.7 113 77.9
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 2.1e-41 172.6 116 74.1
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 2.1e-41 172.6 116 77.6
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 2.8e-41 172.2 126 72.2
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 3.6e-41 171.8 127 69.3
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 3.6e-41 171.8 120 75.8
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 4.7e-41 171.4 116 73.3
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 6.2e-41 171.0 122 73.8
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 6.2e-41 171.0 129 71.3
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 1.4e-40 169.9 114 71.9
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 2.3e-40 169.1 121 71.1
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 3.1e-40 168.7 116 74.1
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 8.9e-40 167.2 117 72.6
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 1.5e-39 166.4 127 70.1
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 1.5e-39 166.4 116 68.1
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 5.8e-39 164.5 113 71.7
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 5.8e-39 164.5 116 69.8
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 3.8e-38 161.8 116 69.8
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 4.9e-38 161.4 113 69.9
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 6.4e-38 161.0 118 73.7
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 5.4e-37 157.9 150 57.3
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 1.6e-36 156.4 113 69.9
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 2.1e-36 156.0 115 65.2
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 2.7e-36 155.6 85 88.2
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 6.0e-36 154.5 115 67.0
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 7.8e-36 154.1 114 65.8
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 2.3e-35 152.5 114 64.9
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 3.0e-35 152.1 171 50.9
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 3.0e-35 152.1 116 65.5
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 6.6e-35 151.0 114 65.8
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 8.6e-35 150.6 114 70.2
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 1.9e-34 149.4 90 78.9
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 4.3e-34 148.3 116 70.7
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 7.3e-34 147.5 114 69.3
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 4.7e-33 144.8 107 66.4
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 2.4e-32 142.5 116 67.2
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 2.4e-32 142.5 128 57.0
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 3.1e-32 142.1 114 63.2
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 4.0e-32 141.7 114 63.2
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.2e-31 140.2 88 75.0
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 2.6e-31 139.0 129 60.5
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.4e-31 138.3 107 69.2
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.7e-30 136.3 116 62.1
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 1.7e-30 136.3 92 69.6
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 6.4e-30 134.4 108 61.1
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 8.4e-30 134.0 111 65.8
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 1.9e-29 132.9 133 56.4
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 3.2e-29 132.1 111 64.9
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 4.6e-28 128.3 101 61.4
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 2.3e-27 125.9 84 73.8
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 3.9e-27 125.2 100 66.0
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 1.9e-26 122.9 106 57.5
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 2.5e-26 122.5 70 81.4
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 6.2e-25 117.9 106 57.5
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 3.1e-24 115.5 70 78.6
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.0e-24 115.2 92 64.1
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 2.6e-23 112.5 171 42.7
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 3.4e-23 112.1 69 78.3
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 1.4e-16 90.1 82 58.5
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 3.2e-13 79.0 48 72.9
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 5.5e-13 78.2 51 72.5
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 7.1e-13 77.8 83 56.6
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 3.0e-11 72.4 66 48.5
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 4.3e-10 68.6 47 72.3
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 9.6e-10 67.4 49 65.3
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-08 62.4 46 71.7


User provided reference genes

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