Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.2e-51 205.3 101 100.0
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.2e-50 201.4 101 98.0
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.7e-43 179.1 96 90.6
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.7e-43 179.1 93 92.5
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.9e-43 177.6 92 93.5
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.9e-42 175.6 92 93.5
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.1e-41 172.2 93 87.1
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 3.0e-40 168.3 96 85.4
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.9e-39 165.6 94 86.2
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 3.3e-39 164.9 97 83.5
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 7.4e-39 163.7 96 80.2
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 7.4e-39 163.7 96 81.2
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 9.6e-39 163.3 96 83.3
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 9.6e-39 163.3 99 80.8
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.3e-38 162.9 96 80.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.3e-38 162.9 97 83.5
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 1.6e-38 162.5 96 80.2
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 2.8e-38 161.8 93 81.7
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 2.8e-38 161.8 96 79.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 2.8e-38 161.8 96 79.2
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 2.8e-38 161.8 97 82.5
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 3.7e-38 161.4 94 84.0
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 4.8e-38 161.0 99 77.8
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.8e-38 161.0 99 77.8
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.8e-38 161.0 99 77.8
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 6.3e-38 160.6 97 82.5
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 8.2e-38 160.2 97 82.5
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.1e-37 159.8 98 80.6
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.8e-37 159.1 98 79.6
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.8e-37 159.1 96 82.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.8e-37 159.1 95 84.2
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 2.4e-37 158.7 93 82.8
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 3.1e-37 158.3 101 82.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 3.1e-37 158.3 98 81.6
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 3.1e-37 158.3 90 83.3
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.1e-37 157.9 99 76.8
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.1e-37 157.9 97 79.4
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.1e-37 157.9 97 79.4
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 4.1e-37 157.9 97 79.4
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 6.9e-37 157.1 98 78.6
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 6.9e-37 157.1 94 80.9
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 9.0e-37 156.8 96 78.1
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.2e-36 156.4 95 78.9
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.0e-36 155.6 90 80.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.6e-36 155.2 99 78.8
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 3.4e-36 154.8 94 77.7
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.4e-36 154.8 88 84.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 4.5e-36 154.5 96 75.0
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 5.9e-36 154.1 90 80.0
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 5.9e-36 154.1 96 78.1
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 7.6e-36 153.7 96 76.0
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.0e-35 153.3 100 77.0
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 1.0e-35 153.3 97 77.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 1.0e-35 153.3 94 80.9
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.7e-35 152.5 95 78.9
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.2e-35 152.1 92 80.4
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.9e-35 151.8 94 78.7
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 3.8e-35 151.4 93 78.5
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 5.0e-35 151.0 90 81.1
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 8.4e-35 150.2 92 75.0
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 8.4e-35 150.2 96 76.0
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 8.4e-35 150.2 98 76.5
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 96 76.0
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.4e-34 149.4 90 81.1
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 75.3
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.9e-34 149.1 97 71.1
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 2.5e-34 148.7 119 67.2
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.5e-34 148.7 100 75.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 3.2e-34 148.3 96 71.9
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 4.2e-34 147.9 97 76.3
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 4.2e-34 147.9 92 73.9
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.5e-34 147.5 96 71.9
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 5.5e-34 147.5 96 75.0
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 7.2e-34 147.1 93 72.0
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.6e-33 146.0 96 71.9
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.6e-33 146.0 99 73.7
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.7e-33 145.2 96 75.0
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.7e-33 145.2 92 78.3
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.7e-33 145.2 92 78.3
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.7e-33 145.2 92 78.3
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.7e-33 145.2 92 78.3
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 2.7e-33 145.2 96 72.9
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 4.6e-33 144.4 90 76.7
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 6.1e-33 144.1 92 77.2
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 6.1e-33 144.1 90 74.4
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.9e-32 141.4 91 75.8
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 5.1e-32 141.0 93 74.2
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 3.3e-31 138.3 102 69.6
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 4.3e-31 137.9 97 71.1
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 4.3e-31 137.9 97 71.1
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 4.3e-31 137.9 90 77.8
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 5.7e-31 137.5 97 71.1
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 9.7e-31 136.7 97 71.1
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 9.7e-31 136.7 97 71.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.6e-30 136.0 79 82.3
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 2.8e-30 135.2 79 81.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.8e-30 134.4 97 70.1
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 2.4e-29 132.1 79 78.5
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 5.3e-29 131.0 79 79.7
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 5.3e-29 131.0 100 72.0
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.2e-28 129.8 82 74.4
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.3e-27 126.3 93 62.4
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 5.5e-26 120.9 83 71.1
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-24 115.9 102 62.7
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 8.8e-24 113.6 80 67.5
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.5e-23 112.8 62 88.7
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-22 109.8 86 65.1
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.8e-21 105.9 85 57.6
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 5.0e-19 97.8 79 57.0
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.9e-18 95.9 111 51.4
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 7.2e-18 94.0 71 63.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 7.9e-17 90.5 95 50.5
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 5.7e-15 84.3 86 48.8
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.7e-11 72.8 45 73.3
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 3.8e-11 71.6 66 54.5
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 3.2e-10 68.6 72 48.6
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 6.1e-09 64.3 37 81.1
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.0e-07 59.3 37 67.6
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 1.3e-06 56.6 46 56.5


User provided reference genes

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