Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014777 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.8e-48 194.9 94 100.0
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 4.5e-22 107.8 87 60.9
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 6.3e-16 87.4 92 56.5
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 9.0e-15 83.6 83 51.8
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 2.6e-14 82.0 92 46.7
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 4.5e-14 81.3 92 50.0
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 4.5e-14 81.3 87 48.3
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 5.9e-14 80.9 91 49.5
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.2e-13 79.0 83 51.8
Sabra17G0067000 Salix brachista HOM05D004965 ORTHO05D004401 2.9e-13 78.6 89 44.9
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 5.0e-13 77.8 85 47.1
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 5.0e-13 77.8 84 47.6
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 5.0e-13 77.8 87 49.4
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 6.5e-13 77.4 89 49.4
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 8.5e-13 77.0 90 48.9
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 1.1e-12 76.6 87 43.7
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 1.9e-12 75.9 86 51.2
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 3.2e-12 75.1 88 43.2
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 5.5e-12 74.3 79 50.6
Cfa007493 Carpinus fangiana HOM05D004965 ORTHO05D004401 7.2e-12 73.9 86 45.3
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 2.1e-11 72.4 91 45.1
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.7e-11 72.0 79 44.3
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.7e-11 72.0 82 51.2
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 3.6e-11 71.6 100 43.0
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 4.6e-11 71.2 84 48.8
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 6.1e-11 70.9 91 45.1
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.4e-10 69.7 98 40.8
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 1.8e-10 69.3 90 42.2
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.8e-10 69.3 92 42.4
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 2.3e-10 68.9 85 44.7
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 3.9e-10 68.2 121 35.5
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.9e-10 68.2 99 37.4
Manes.01G193600 Manihot esculenta HOM05D004965 ORTHO05D004401 3.9e-10 68.2 77 42.9
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 5.1e-10 67.8 86 46.5
TWI12G0653 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 5.1e-10 67.8 90 44.4
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 6.7e-10 67.4 99 37.4
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 6.7e-10 67.4 85 44.7
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 6.7e-10 67.4 95 41.1
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 8.8e-10 67.0 79 46.8
Ciclev10013642m.g Citrus clementina HOM05D004965 ORTHO05D004401 8.8e-10 67.0 82 40.2
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 8.8e-10 67.0 84 45.2
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 1.1e-09 66.6 94 42.6
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.1e-09 66.6 93 41.9
Sabra10G0027200 Salix brachista HOM05D004965 ORTHO05D004401 1.1e-09 66.6 103 42.7
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.5e-09 66.2 99 37.4
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 1.5e-09 66.2 92 45.7
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 1.5e-09 66.2 85 41.2
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 1.5e-09 66.2 93 41.9
DCAR_007120 Daucus carota HOM05D004965 ORTHO05D004401 2.0e-09 65.9 98 43.9
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 2.0e-09 65.9 84 42.9
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.5e-09 65.5 106 40.6
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.5e-09 65.5 85 42.4
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 3.3e-09 65.1 85 42.4
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 3.3e-09 65.1 105 39.0
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 3.3e-09 65.1 85 42.4
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 4.3e-09 64.7 86 44.2
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 4.3e-09 64.7 84 40.5
Eucgr.B02578 Eucalyptus grandis HOM05D004965 ORTHO05D004401 5.7e-09 64.3 85 40.0
FAN17G0917 Fragaria x ananassa HOM05D004965 ORTHO05D004401 5.7e-09 64.3 94 40.4
Rhsim10G0029300 Rhododendron simsii HOM05D004965 ORTHO05D004401 5.7e-09 64.3 87 46.0
vmacro05780 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 5.7e-09 64.3 84 41.7
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 7.4e-09 63.9 92 41.3
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 9.7e-09 63.5 79 41.8
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 9.7e-09 63.5 85 41.2
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 9.7e-09 63.5 83 45.8
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 1.3e-08 63.2 97 42.3
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.7e-08 62.8 84 45.2
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 1.7e-08 62.8 101 41.6
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 2.2e-08 62.4 89 40.4
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 2.8e-08 62.0 84 45.2
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 4.8e-08 61.2 88 42.0
CDE04G1822 Ceratophyllum demersum HOM05D004965 ORTHO05D004401 6.3e-08 60.8 90 41.1
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 6.3e-08 60.8 94 42.6
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 6.3e-08 60.8 75 41.3
Lj2g0009068 Lotus japonicus HOM05D004965 ORTHO05D004401 6.3e-08 60.8 91 40.7
Oeu011717.2 Olea europaea HOM05D004965 ORTHO05D004401 6.3e-08 60.8 85 40.0
Hund13292 Selenicereus undatus HOM05D004965 ORTHO05D004401 6.3e-08 60.8 86 46.5
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 8.2e-08 60.5 87 46.0
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 1.1e-07 60.1 83 39.8
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.4e-07 59.7 88 43.2
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 1.4e-07 59.7 85 40.0
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 1.4e-07 59.7 89 41.6
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 1.8e-07 59.3 91 40.7
CsaV3_6G036050 Cucumis sativus L. HOM05D004965 ORTHO05D004401 1.8e-07 59.3 87 40.2
MD17G1044000 Malus domestica HOM05D004965 ORTHO05D004401 1.8e-07 59.3 84 38.1
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.8e-07 59.3 89 40.4
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 3.1e-07 58.5 91 40.7
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 4.1e-07 58.2 87 36.8
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 4.1e-07 58.2 90 36.7
Phvul.002G079000 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 4.1e-07 58.2 87 39.1
Cpa.g.sc5.310 Carica papaya HOM05D004965 ORTHO05D004401 6.9e-07 57.4 69 46.4
Eucgr.J02154 Eucalyptus grandis HOM05D004965 ORTHO05D004401 6.9e-07 57.4 90 38.9
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 9.1e-07 57.0 79 40.5
ECA246G4714 Erigeron canadensis HOM05D004965 ORTHO05D004401 1.2e-06 56.6 82 41.5
Glyma.19G017400 Glycine max HOM05D004965 ORTHO05D004401 1.2e-06 56.6 75 36.0
TWI75G1371 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.2e-06 56.6 101 44.6
Medtr5g037140 Medicago truncatula HOM05D004965 ORTHO05D004401 1.5e-06 56.2 84 40.5
Phvul.004G023800 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 1.5e-06 56.2 85 34.1
FvH4_6g49680 Fragaria vesca HOM05D004965 ORTHO05D004401 2.0e-06 55.8 89 42.7
FAN09G1906 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.0e-06 55.8 89 42.7
Glyma.13G067000 Glycine max HOM05D004965 ORTHO05D004401 2.6e-06 55.5 75 34.7
Lalb_Chr06g0176581 Lupinus albus HOM05D004965 ORTHO05D004401 2.6e-06 55.5 82 39.0
CsaV3_5G032070 Cucumis sativus L. HOM05D031204 ORTHO05D004401 3.4e-06 55.1 85 41.2
RcHm_v2.0_Chr2g0169701 Rosa chinensis HOM05D004965 ORTHO05D004401 3.4e-06 55.1 80 37.5
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 4.5e-06 54.7 44 54.5
Sabra08G0145000 Salix brachista HOM05D004965 ORTHO05D004401 4.5e-06 54.7 79 44.3
Sc10g0004060 Simmondsia chinensis HOM05D004965 ORTHO05D004401 4.5e-06 54.7 91 36.3
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 5.9e-06 54.3 100 37.0
FAN14G2761 Fragaria x ananassa HOM05D004965 ORTHO05D004401 5.9e-06 54.3 89 41.6
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 5.9e-06 54.3 78 43.6
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 5.9e-06 54.3 91 34.1
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 7.7e-06 53.9 81 42.0


User provided reference genes

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