Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 0.0e+00 1268.1 639 100.0
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 4.2e-281 971.1 641 78.9
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 3.5e-267 924.9 642 74.5
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 2.1e-248 862.4 643 69.7
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 1.4e-244 849.7 578 76.8
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 5.4e-236 821.2 649 68.3
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 1.2e-235 820.1 640 66.9
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 6.4e-229 797.7 639 66.0
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 3.2e-228 795.4 640 65.5
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.6e-227 793.1 632 66.1
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 4.7e-224 781.6 644 64.8
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 4.7e-224 781.6 644 64.0
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.1e-223 780.4 644 64.1
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 1.5e-222 776.5 643 63.9
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 2.0e-222 776.2 631 66.6
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 2.6e-222 775.8 643 64.7
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 3.2e-220 768.8 640 63.1
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 8.6e-218 760.8 627 63.5
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 1.5e-217 760.0 641 62.7
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 3.3e-217 758.8 642 62.6
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.6e-216 756.5 624 61.2
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 4.7e-216 755.0 676 60.5
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 2.4e-215 752.7 650 63.4
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 1.2e-214 750.4 642 63.4
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 3.4e-214 748.8 496 77.6
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.3e-213 746.9 646 61.6
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 8.4e-213 744.2 644 61.5
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 1.4e-212 743.4 640 61.2
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 4.2e-212 741.9 626 61.8
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 9.3e-212 740.7 647 62.0
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 6.0e-211 738.0 637 61.7
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.0e-210 737.3 639 60.9
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 3.9e-210 735.3 621 63.0
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 1.1e-209 733.8 644 60.6
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 3.3e-209 732.3 649 60.2
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 2.8e-208 729.2 643 60.7
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 8.1e-208 727.6 646 61.1
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 1.4e-207 726.9 635 59.8
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 3.1e-207 725.7 639 61.0
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 5.3e-207 724.9 638 60.8
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 1.2e-206 723.8 639 62.0
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 1.2e-206 723.8 582 66.2
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 4.5e-206 721.8 626 60.5
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 7.6e-206 721.1 632 61.1
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 9.9e-206 720.7 629 59.5
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 1.1e-204 717.2 641 61.8
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 1.9e-204 716.5 632 60.6
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 7.9e-203 711.1 641 61.3
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 8.7e-202 707.6 645 58.8
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 1.1e-201 707.2 649 58.4
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 2.1e-200 703.0 649 59.3
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.1e-199 700.7 644 59.3
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 4.0e-199 698.7 636 59.9
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 5.3e-199 698.4 655 58.5
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 1.5e-198 696.8 648 57.3
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 2.6e-198 696.0 641 60.2
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 5.8e-198 694.9 616 60.4
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 2.9e-197 692.6 643 59.7
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 6.4e-197 691.4 663 58.7
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 6.4e-197 691.4 648 58.8
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 1.1e-196 690.6 644 59.2
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 2.4e-196 689.5 637 59.7
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 1.6e-195 686.8 643 56.9
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 4.6e-195 685.3 633 58.8
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 1.3e-194 683.7 635 55.9
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 6.7e-194 681.4 650 58.3
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 7.4e-193 677.9 649 57.5
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 2.8e-192 676.0 633 56.2
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 3.4e-190 669.1 617 60.9
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 3.4e-190 669.1 626 57.7
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 7.6e-190 667.9 638 56.7
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 7.6e-190 667.9 696 54.3
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 6.0e-187 658.3 566 59.0
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 3.9e-186 655.6 647 55.8
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 5.1e-186 655.2 605 60.5
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.5e-185 652.9 607 59.3
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 4.3e-185 652.1 622 55.8
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 3.4e-182 642.5 646 54.6
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 5.9e-182 641.7 640 54.8
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 1.7e-181 640.2 584 58.7
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.3e-178 630.6 639 55.4
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.8e-178 630.2 660 52.0
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 1.9e-177 626.7 638 53.9
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 3.3e-177 625.9 494 65.8
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 4.3e-177 625.5 636 53.1
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 2.2e-176 623.2 632 54.6
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 8.2e-176 621.3 581 58.7
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 3.4e-174 615.9 588 57.7
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 4.5e-174 615.5 642 52.2
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 5.0e-173 612.1 647 52.6
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 1.9e-172 610.1 650 51.5
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 4.2e-172 609.0 661 53.6
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 5.5e-172 608.6 643 52.3
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.1e-171 606.7 565 58.1
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 1.8e-170 603.6 646 52.0
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 5.1e-170 602.1 644 51.6
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 2.0e-169 600.1 551 58.6
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 7.4e-169 598.2 646 50.3
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 3.7e-168 595.9 716 50.1
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 8.2e-168 594.7 644 51.1
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.8e-167 593.6 642 50.0
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 3.1e-167 592.8 673 50.2
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 3.1e-167 592.8 522 60.7
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 4.1e-167 592.4 596 54.2
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 2.0e-166 590.1 629 50.6
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 2.0e-166 590.1 629 50.6
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 2.0e-166 590.1 486 63.4
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 2.6e-166 589.7 632 50.9
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 5.9e-166 588.6 629 50.4
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 6.5e-165 585.1 630 50.5
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 6.5e-165 585.1 630 50.5
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 6.5e-165 585.1 566 56.9
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.9e-164 583.6 642 50.9
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 5.5e-164 582.0 527 59.4
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 2.3e-162 576.6 608 51.2
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 4.4e-161 572.4 643 49.8
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 6.5e-157 558.5 494 58.5
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 2.5e-156 556.6 666 49.1
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 5.5e-156 555.4 587 51.3
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 9.4e-156 554.7 645 53.3
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 7.0e-151 538.5 537 52.1
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 2.7e-150 536.6 691 45.9
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 1.7e-149 533.9 532 55.1
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 6.8e-146 521.9 532 51.9
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 2.6e-145 520.0 628 48.9
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.5e-141 505.4 424 60.4
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 5.2e-130 469.2 639 46.8
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 5.4e-127 459.1 486 52.3
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.6e-123 446.4 463 52.1
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.6e-123 446.4 463 52.1
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 4.0e-122 443.0 533 47.8
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 6.0e-118 429.1 479 49.9
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 7.8e-118 428.7 621 41.2
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 1.6e-115 421.0 619 42.0
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 3.7e-112 409.8 638 40.0
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 1.0e-109 401.7 393 54.5
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 6.6e-101 372.5 495 44.8
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 6.5e-72 276.2 591 33.3
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 4.2e-71 273.5 510 35.7
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.1e-66 258.8 358 44.4
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 1.1e-60 238.8 287 49.1
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 1.1e-50 205.7 191 51.8
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 6.5e-48 196.4 195 47.7
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 5.3e-42 176.8 137 65.0
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.0e-24 119.4 158 36.7
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 5.0e-24 117.1 154 49.4
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 5.2e-21 107.1 64 75.0
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 2.4e-18 98.2 126 51.6
SEGI_38081 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.0e-08 64.7 60 53.3
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-07 61.6 39 61.5
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 4.7e-06 57.4 63 46.0


User provided reference genes

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