Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.0e-133 479.2 249 100.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 8.8e-110 400.6 218 91.3
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.1e-104 383.6 219 88.1
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.3e-104 382.1 218 88.1
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.5e-104 380.6 218 87.6
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.5e-104 380.6 218 87.6
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.4e-102 376.7 213 87.8
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.6e-101 372.5 218 85.3
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.2e-100 369.4 218 85.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 3.7e-100 368.6 213 85.9
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 3.7e-100 368.6 209 89.5
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 4.9e-100 368.2 217 84.3
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 8.3e-100 367.5 219 84.5
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.1e-99 367.1 209 89.0
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.4e-99 366.7 213 85.9
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.8e-99 366.3 218 83.9
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 7.0e-99 364.4 218 83.9
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.2e-99 364.0 208 85.6
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.2e-98 363.6 219 84.5
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.6e-98 363.2 218 84.9
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.0e-98 362.8 219 83.1
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 2.7e-98 362.5 218 82.6
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 2.7e-98 362.5 219 84.0
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 3.5e-98 362.1 219 84.9
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 4.6e-98 361.7 210 85.7
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 7.8e-98 360.9 218 83.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.0e-97 360.5 219 83.6
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.3e-97 359.4 214 82.7
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.0e-97 359.0 219 83.6
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 3.0e-97 359.0 218 83.0
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 3.0e-97 359.0 228 80.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 5.0e-97 358.2 219 83.6
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 6.6e-97 357.8 210 84.3
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 6.6e-97 357.8 210 84.3
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.1e-96 357.1 206 85.9
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.5e-96 355.9 212 85.4
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 3.3e-96 355.5 225 79.1
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 3.3e-96 355.5 204 87.3
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 4.3e-96 355.1 204 86.3
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 5.6e-96 354.8 210 82.4
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 5.6e-96 354.8 210 82.4
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 7.3e-96 354.4 219 84.0
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 7.3e-96 354.4 201 86.1
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 7.3e-96 354.4 210 82.4
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 7.3e-96 354.4 217 82.5
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 7.3e-96 354.4 213 84.0
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 7.3e-96 354.4 213 84.0
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 9.5e-96 354.0 219 83.1
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 2.1e-95 352.8 219 79.9
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 3.6e-95 352.1 214 81.3
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.6e-95 352.1 211 82.9
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 6.2e-95 351.3 218 79.4
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 8.0e-95 350.9 219 79.5
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.1e-94 350.5 207 84.1
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.8e-94 349.7 206 84.5
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.8e-94 349.7 247 75.7
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.8e-94 349.7 247 75.7
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.1e-94 349.0 219 82.6
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 2.6e-93 345.9 207 82.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 2.6e-93 345.9 239 74.9
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 4.4e-93 345.1 219 79.5
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 5.8e-93 344.7 207 82.1
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 9.8e-93 344.0 212 80.2
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 9.8e-93 344.0 212 80.2
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 9.8e-93 344.0 219 79.5
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.7e-92 343.2 216 77.8
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.9e-92 342.4 209 81.3
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 2.9e-92 342.4 207 81.6
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.1e-91 340.5 207 80.7
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.4e-91 340.1 211 80.1
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.9e-91 339.7 207 81.2
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 2.4e-91 339.3 207 79.2
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.4e-91 338.2 207 79.7
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 5.4e-91 338.2 218 81.2
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 9.2e-91 337.4 207 80.2
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.6e-90 336.7 206 83.0
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 2.7e-90 335.9 207 79.7
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 7.8e-90 334.3 205 82.4
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 2.3e-89 332.8 206 81.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 5.0e-89 331.6 196 86.2
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.9e-88 329.7 238 71.4
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.9e-88 329.7 218 78.9
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.5e-88 329.3 196 82.1
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 3.3e-88 328.9 206 79.1
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.3e-88 327.8 219 79.0
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.4e-86 323.6 219 79.9
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.2e-84 316.2 193 80.3
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.6e-82 310.1 183 83.1
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 3.1e-78 295.8 196 78.6
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 4.4e-77 292.0 206 70.4
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.7e-76 290.0 230 69.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.4e-75 286.2 213 69.0
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.2e-74 283.9 219 72.1
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.2e-74 283.9 206 68.9
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.1e-74 283.1 169 86.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 6.0e-74 281.6 217 69.1
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 8.7e-73 277.7 206 67.5
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 3.6e-71 272.3 202 73.8
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.6e-71 272.3 206 67.5
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 3.6e-71 272.3 174 81.6
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 3.8e-68 262.3 172 79.1
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.5e-66 255.8 153 87.6
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 9.6e-64 247.7 143 85.3
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.9e-60 236.1 136 90.4
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.9e-57 225.7 138 87.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.0e-54 215.7 183 65.6
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 3.7e-47 192.6 120 83.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.8e-46 190.3 112 83.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 2.6e-45 186.4 138 71.0
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.4e-38 164.1 108 79.6
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 7.6e-37 158.3 136 66.9
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.4e-35 154.1 114 71.9
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.3e-32 142.9 86 75.6
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 5.7e-32 142.1 207 40.1
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 7.4e-32 141.7 204 38.2
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 4.5e-29 132.5 194 37.6
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 2.1e-26 123.6 101 67.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 3.6e-26 122.9 101 66.3
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.4e-22 110.9 81 74.1
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 1.3e-20 104.4 111 56.8
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 2.7e-18 96.7 69 58.0
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 6.1e-18 95.5 51 80.4
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 1.5e-08 64.3 50 72.0


User provided reference genes

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