Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014743 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 7.2e-89 330.5 159 100.0
CSS0008776 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 5.4e-20 101.7 90 57.8
Dinv26837 Davidia involucrata HOM05D000627 ORTHO05D000365 2.1e-19 99.8 165 40.0
Dinv30001 Davidia involucrata HOM05D000627 ORTHO05D000365 5.3e-15 85.1 164 35.4
Hma1.2p1_0909F.1_g235800 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 1.7e-13 80.1 85 48.2
Manes.12G104100 Manihot esculenta HOM05D000627 ORTHO05D000365 4.2e-12 75.5 110 40.9
CiPaw.01G016500 Carya illinoinensis HOM05D000627 ORTHO05D000365 9.3e-12 74.3 109 38.5
Eucgr.I00906 Eucalyptus grandis HOM05D000627 ORTHO05D000365 2.7e-11 72.8 94 39.4
Prupe.7G131400 Prunus persica HOM05D000627 ORTHO05D000365 2.7e-11 72.8 90 43.3
Duzib187G0566 Durio zibethinus HOM05D000627 ORTHO05D000365 3.5e-11 72.4 90 43.3
Rhsim08G0099600 Rhododendron simsii HOM05D000627 ORTHO05D000365 3.5e-11 72.4 78 50.0
GSVIVG01022111001 Vitis vinifera HOM05D000627 ORTHO05D000365 4.6e-11 72.0 120 38.3
vmacro17958 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 6.0e-11 71.6 104 43.3
Ciclev10025735m.g Citrus clementina HOM05D000627 ORTHO05D000365 3.0e-10 69.3 83 45.8
Thecc.08G003800 Theobroma cacao HOM05D000627 ORTHO05D000365 3.0e-10 69.3 110 40.0
Thecc.01G058800 Theobroma cacao HOM05D000627 ORTHO05D000365 3.9e-10 68.9 158 31.6
Cfa004034 Carpinus fangiana HOM05D003103 ORTHO05D003999 8.7e-10 67.8 90 41.1
Duzib264G1235 Durio zibethinus HOM05D000627 ORTHO05D000365 2.5e-09 66.2 90 42.2
TWI09G1501 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 2.5e-09 66.2 90 40.0
Lj4C151G11 Lonicera japonica HOM05D000627 ORTHO05D000365 5.6e-09 65.1 77 46.8
MD02G1174600 Malus domestica HOM05D000627 ORTHO05D000365 7.3e-09 64.7 77 44.2
Haze_15379 Corylus avellana HOM05D000627 ORTHO05D000365 9.6e-09 64.3 90 40.0
Gohir.D11G200500 Gossypium hirsutum HOM05D000627 ORTHO05D000365 1.3e-08 63.9 90 40.0
Gorai.007G214800 Gossypium raimondii HOM05D000627 ORTHO05D000365 1.6e-08 63.5 90 40.0
Atru.chr3.304 Acer truncatum HOM05D000627 ORTHO05D000365 2.1e-08 63.2 87 42.5
Aqoxy5G01196 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 2.1e-08 63.2 88 44.3
Duzib147G1372 Durio zibethinus HOM05D000627 ORTHO05D000365 2.1e-08 63.2 90 40.0
Gohir.A11G193400 Gossypium hirsutum HOM05D000627 ORTHO05D000365 4.8e-08 62.0 90 38.9
CANSAT01G2532 Cannabis sativa HOM05D000627 ORTHO05D000365 6.2e-08 61.6 129 35.7
QL06p040949 Quercus lobata HOM05D000627 ORTHO05D000365 6.2e-08 61.6 77 40.3
COL.COLO4_11443 Corchorus olitorius HOM05D000627 ORTHO05D000365 1.1e-07 60.8 158 32.3
CSS0018951 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 1.4e-07 60.5 75 44.0
FvH4_1g16230 Fragaria vesca HOM05D000627 ORTHO05D000365 1.4e-07 60.5 158 31.6
Prupe.1G432800 Prunus persica HOM05D000627 ORTHO05D000365 1.8e-07 60.1 88 39.8
GSVIVG01009467001 Vitis vinifera HOM05D000627 ORTHO05D000365 2.4e-07 59.7 77 41.6
RcHm_v2.0_Chr2g0105931 Rosa chinensis HOM05D000627 ORTHO05D000365 3.1e-07 59.3 78 46.2
Cpa.g.sc55.132 Carica papaya HOM05D000627 ORTHO05D000365 4.0e-07 58.9 72 41.7
Duzib093G1045 Durio zibethinus HOM05D000627 ORTHO05D000365 4.0e-07 58.9 111 35.1
PGR004G2742 Punica granatum HOM05D000627 ORTHO05D000365 4.0e-07 58.9 68 47.1
Gohir.D05G207200 Gossypium hirsutum HOM05D000627 ORTHO05D000365 5.3e-07 58.5 111 34.2
Gorai.009G213800 Gossypium raimondii HOM05D000627 ORTHO05D000365 5.3e-07 58.5 111 34.2
Lalb_Chr16g0378581 Lupinus albus HOM05D000627 ORTHO05D000365 5.3e-07 58.5 87 42.5
FAN15G1551 Fragaria x ananassa HOM05D000627 ORTHO05D000365 6.9e-07 58.2 88 37.5
FAN27G3232 Fragaria x ananassa HOM05D000627 ORTHO05D000365 6.9e-07 58.2 74 41.9
Nn5g30344 Nelumbo nucifera HOM05D000627 ORTHO05D000365 6.9e-07 58.2 87 40.2
Sabra14G0017700 Salix brachista HOM05D000627 ORTHO05D000365 6.9e-07 58.2 74 44.6
CiPaw.15G054600 Carya illinoinensis HOM05D000627 ORTHO05D000365 9.0e-07 57.8 123 33.3
Sopen02g037840 Solanum pennellii HOM05D000627 ORTHO05D000365 9.0e-07 57.8 73 42.5
PGSC0003DMG400004011 Solanum tuberosum HOM05D000627 ORTHO05D000365 1.2e-06 57.4 73 42.5
FAN24G0731 Fragaria x ananassa HOM05D000627 ORTHO05D000365 1.5e-06 57.0 88 36.4
Nitab4.5_0002029g0050 Nicotiana tabacum HOM05D000627 ORTHO05D000365 1.5e-06 57.0 90 38.9
Actinidia22645 Actinidia chinensis HOM05D000627 ORTHO05D000365 2.0e-06 56.6 87 39.1
Oeu014830.2 Olea europaea HOM05D000627 ORTHO05D000365 2.0e-06 56.6 90 41.1
Duzib041G0344 Durio zibethinus HOM05D000627 ORTHO05D000365 2.6e-06 56.2 88 39.8
Potri.002G124400 Populus trichocarpa HOM05D000627 ORTHO05D000365 2.6e-06 56.2 85 38.8
Potri.014G025800 Populus trichocarpa HOM05D000627 ORTHO05D000365 2.6e-06 56.2 85 40.0
RcHm_v2.0_Chr6g0308251 Rosa chinensis HOM05D000627 ORTHO05D000365 2.6e-06 56.2 88 37.5
Solyc02g093280.2 Solanum lycopersicum HOM05D000627 ORTHO05D000365 2.6e-06 56.2 112 33.0
Dinv35940 Davidia involucrata HOM05D000627 ORTHO05D000365 3.4e-06 55.8 111 35.1
TAR628G1704 Trochodendron aralioides HOM05D000627 ORTHO05D000365 3.4e-06 55.8 110 31.8
CAN.G370.46 Capsicum annuum HOM05D000627 ORTHO05D000365 4.5e-06 55.5 71 43.7
Cpa.g.sc21.176 Carica papaya HOM05D000627 ORTHO05D000365 4.5e-06 55.5 121 32.2
Gohir.A05G204000 Gossypium hirsutum HOM05D000627 ORTHO05D000365 4.5e-06 55.5 107 37.4
PSO210G3967 Papaver somniferum HOM05D000627 ORTHO05D000365 4.5e-06 55.5 89 46.1
QL02p004388 Quercus lobata HOM05D000627 ORTHO05D000365 4.5e-06 55.5 103 35.9
Ciclev10003738m.g Citrus clementina HOM05D000627 ORTHO05D000365 5.8e-06 55.1 111 35.1
Manes.18G039601 Manihot esculenta HOM05D000627 ORTHO05D000365 5.8e-06 55.1 132 31.8
PSO170G5241 Papaver somniferum HOM05D000627 ORTHO05D000365 5.8e-06 55.1 89 46.1
FvH4_2g34100 Fragaria vesca HOM05D000627 ORTHO05D000365 7.6e-06 54.7 88 35.2
FAN20G1444 Fragaria x ananassa HOM05D000627 ORTHO05D000365 9.9e-06 54.3 88 36.4
FAN23G0049 Fragaria x ananassa HOM05D003103 ORTHO05D003999 9.9e-06 54.3 79 44.3
FAN26G2157 Fragaria x ananassa HOM05D000627 ORTHO05D000365 9.9e-06 54.3 79 44.3
Nitab4.5_0002694g0010 Nicotiana tabacum HOM05D000627 ORTHO05D000365 9.9e-06 54.3 112 32.1
Phvul.002G017600 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 9.9e-06 54.3 85 38.8
VMungo0251G3455 Vigna mungo HOM05D000627 ORTHO05D000365 9.9e-06 54.3 87 37.9


User provided reference genes

Program Settings