Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014738 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 9.2e-105 383.6 204 100.0
CSS0011221 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 2.3e-87 325.9 217 84.3
CSS0050002 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 1.4e-60 236.9 177 79.7
Dinv15008 Davidia involucrata HOM05D006832 ORTHO05D008292 1.2e-32 144.1 246 43.1
Rhsim04G0036600 Rhododendron simsii HOM05D006832 ORTHO05D008292 2.7e-32 142.9 246 45.1
Actinidia03616 Actinidia chinensis HOM05D006832 ORTHO05D008292 1.5e-30 137.1 204 45.6
Rhsim04G0036900 Rhododendron simsii HOM05D006832 ORTHO05D008292 3.4e-27 125.9 206 46.1
RhsimUnG0013300 Rhododendron simsii HOM05D006832 ORTHO05D008292 3.4e-27 125.9 206 46.1
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 1.0e-23 114.4 217 42.4
vmacro09407 Vaccinium macrocarpon HOM05D006832 ORTHO05D008292 2.1e-16 90.1 214 37.9
Cc05_g10910 Coffea canephora HOM05D006832 ORTHO05D008292 2.7e-16 89.7 261 34.9
PGSC0003DMG401021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 2.7e-16 89.7 226 36.3
Sopen10g003390 Solanum pennellii HOM05D006832 ORTHO05D008292 6.1e-16 88.6 231 36.4
GSVIVG01014166001 Vitis vinifera HOM05D006832 ORTHO05D008292 2.3e-15 86.7 225 36.9
Solyc10g007440.3 Solanum lycopersicum HOM05D006832 ORTHO05D008292 3.3e-14 82.8 191 36.1
PGSC0003DMG403021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 1.3e-13 80.9 212 35.8
QL08p024452 Quercus lobata HOM05D006832 ORTHO05D008292 4.8e-13 79.0 211 35.5
Sopen10g003400 Solanum pennellii HOM05D006832 ORTHO05D008292 6.3e-13 78.6 212 35.4
CAN.G904.32 Capsicum annuum HOM05D006832 ORTHO05D008292 8.2e-13 78.2 174 38.5
Solyc10g007460.4 Solanum lycopersicum HOM05D006832 ORTHO05D008292 1.8e-12 77.0 225 34.2
Potri.001G376900 Populus trichocarpa HOM05D006832 ORTHO05D008292 1.6e-11 73.9 198 34.3
MSTRG.6686 Avicennia marina HOM05D006832 ORTHO05D008292 2.0e-11 73.6 247 33.2
Oeu021042.1 Olea europaea HOM05D006832 ORTHO05D008292 2.0e-11 73.6 195 35.4
CANSAT56G2937 Cannabis sativa HOM05D006832 ORTHO05D008292 3.8e-10 69.3 241 29.5
Sabra16G0248300 Salix brachista HOM05D006832 ORTHO05D008292 5.0e-10 68.9 198 34.3
Thecc.07G123300 Theobroma cacao HOM05D006832 ORTHO05D008292 6.5e-10 68.6 223 33.2
Cpa.g.sc77.49 Carica papaya HOM05D006832 ORTHO05D008292 1.1e-09 67.8 201 35.3
MD03G1246100 Malus domestica HOM05D006832 ORTHO05D008292 1.5e-09 67.4 212 32.5
CARHR043680 Cardamine hirsuta HOM05D006832 ORTHO05D008292 2.5e-09 66.6 194 33.5
Lalb_Chr25g0285711 Lupinus albus HOM05D006832 ORTHO05D008292 9.4e-09 64.7 208 34.6
Psat5g234400 Pisum sativum HOM05D006832 ORTHO05D008292 2.1e-08 63.5 222 29.3
Thhalv10011680m.g Eutrema salsugineum HOM05D006832 ORTHO05D008292 1.0e-07 61.2 201 34.3
Haze_09257 Corylus avellana HOM05D006832 ORTHO05D008292 1.4e-07 60.8 156 37.8
FvH4_3g18000 Fragaria vesca HOM05D006832 ORTHO05D008292 2.3e-07 60.1 224 33.0
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 2.3e-07 60.1 207 33.3
Migut.M00714 Erythranthe guttata HOM05D006832 ORTHO05D008292 4.0e-07 59.3 244 29.5
Manes.15G097000 Manihot esculenta HOM05D006832 ORTHO05D008292 4.0e-07 59.3 206 31.1
AL1G62020 Arabidopsis lyrata HOM05D006832 ORTHO05D008292 6.8e-07 58.5 209 34.0
Cfa019523 Carpinus fangiana HOM05D006832 ORTHO05D008292 8.8e-07 58.2 154 37.0
RcHm_v2.0_Chr5g0030051 Rosa chinensis HOM05D006832 ORTHO05D008292 8.8e-07 58.2 230 32.6
Peaxi162Scf00692g00121 Petunia axillaris HOM05D006832 ORTHO05D008292 1.2e-06 57.8 132 35.6
CiPaw.11G157300 Carya illinoinensis HOM05D006832 ORTHO05D008292 2.0e-06 57.0 230 29.6
Lsat_1_v5_gn_9_100561 Lactuca sativa HOM05D006832 ORTHO05D008292 2.0e-06 57.0 246 27.2
Nitab4.5_0000383g0030 Nicotiana tabacum HOM05D006832 ORTHO05D008292 3.4e-06 56.2 285 27.0
BraA08t32219Z Brassica rapa HOM05D006832 ORTHO05D008292 4.4e-06 55.8 161 36.6
FAN21G3714 Fragaria x ananassa HOM05D006832 ORTHO05D008292 4.4e-06 55.8 172 34.3
Gorai.013G174800 Gossypium raimondii HOM05D006832 ORTHO05D008292 4.4e-06 55.8 235 31.1
BcaB04g17079 Brassica carinata HOM05D006832 ORTHO05D008292 5.7e-06 55.5 203 32.0
THA.LOC104810427 Tarenaya hassleriana HOM05D006832 ORTHO05D008292 7.5e-06 55.1 199 31.2
Carub.0001s4265 Capsella rubella HOM05D006832 ORTHO05D008292 9.8e-06 54.7 198 30.8
Gohir.D13G154700 Gossypium hirsutum HOM05D006832 ORTHO05D008292 9.8e-06 54.7 203 32.0
TPR.G13159 Trifolium pratense HOM05D006832 ORTHO05D008292 9.8e-06 54.7 221 29.0


User provided reference genes

Program Settings