Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014726 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 5.7e-60 234.2 129 100.0
Actinidia24011 Actinidia chinensis HOM05D000086 ORTHO05D000431 3.3e-23 112.1 128 60.9
Hma1.2p1_0784F.1_g217310 Hydrangea macrophylla HOM05D000086 ORTHO05D000431 1.2e-22 110.2 118 59.3
Dinv09001 Davidia involucrata HOM05D000113 ORTHO05D005496 1.8e-21 106.3 110 60.0
Actinidia26571 Actinidia chinensis HOM05D000086 ORTHO05D000431 2.3e-21 105.9 116 60.3
Hma1.2p1_0522F.1_g171890 Hydrangea macrophylla HOM05D000086 ORTHO05D000431 9.8e-20 100.5 125 54.4
Manes.07G037700 Manihot esculenta HOM05D000086 ORTHO05D000431 1.2e-17 93.6 117 56.4
TAR625G0609 Trochodendron aralioides HOM05D000086 ORTHO05D000431 2.3e-16 89.4 100 54.0
Oeu022082.1 Olea europaea HOM05D000086 ORTHO05D000431 2.5e-15 85.9 90 60.0
TAR628G0774 Trochodendron aralioides HOM05D000086 ORTHO05D000431 1.1e-13 80.5 144 41.7
TAR376G0764 Trochodendron aralioides HOM05D000086 ORTHO05D000431 8.9e-13 77.4 94 55.3
Actinidia28205 Actinidia chinensis HOM05D000086 ORTHO05D000431 5.8e-12 74.7 121 46.3
CiPaw.05G032000 Carya illinoinensis HOM05D000086 ORTHO05D000431 7.5e-12 74.3 119 45.4
MSTRG.16604 Avicennia marina HOM05D000086 ORTHO05D000431 9.8e-12 73.9 118 44.9
Lj4P279T8 Lonicera japonica HOM05D000086 ORTHO05D000431 2.2e-11 72.8 86 54.7
RhsimUnG0187500 Rhododendron simsii HOM05D000086 ORTHO05D000431 2.2e-11 72.8 110 50.0
Cpa.g.sc42.20 Carica papaya HOM05D000086 ORTHO05D000431 1.4e-10 70.1 108 49.1
Prupe.8G066400 Prunus persica HOM05D000086 ORTHO05D000431 1.9e-10 69.7 117 47.9
QL11p023242 Quercus lobata HOM05D000086 ORTHO05D000431 2.4e-10 69.3 132 39.4
Nn5g29979 Nelumbo nucifera HOM05D000086 ORTHO05D000431 3.2e-10 68.9 91 48.4
Thecc.02G133000 Theobroma cacao HOM05D000086 ORTHO05D000431 3.2e-10 68.9 115 46.1
Cc02_g21130 Coffea canephora HOM05D000086 ORTHO05D000431 5.4e-10 68.2 111 45.0
Duzib248G0914 Durio zibethinus HOM05D000086 ORTHO05D000431 1.2e-09 67.0 114 46.5
Nn1g05473 Nelumbo nucifera HOM05D000086 ORTHO05D000431 2.0e-09 66.2 96 49.0
QL06p047938 Quercus lobata HOM05D000086 ORTHO05D000431 3.5e-09 65.5 101 44.6
CANSAT01G0420 Cannabis sativa HOM05D000086 ORTHO05D000431 4.6e-09 65.1 94 47.9
Potri.007G111900 Populus trichocarpa HOM05D000086 ORTHO05D000431 7.8e-09 64.3 119 41.2
TAR381G1377 Trochodendron aralioides HOM05D000086 ORTHO05D000431 7.8e-09 64.3 106 43.4
COL.COLO4_32324 Corchorus olitorius HOM05D000086 ORTHO05D000431 1.7e-08 63.2 117 42.7
Lj5P233T15 Lonicera japonica HOM05D000086 ORTHO05D000431 1.7e-08 63.2 116 43.1
Cfa005686 Carpinus fangiana HOM05D000086 ORTHO05D000431 2.3e-08 62.8 116 45.7
Haze_24831 Corylus avellana HOM05D000086 ORTHO05D000431 2.3e-08 62.8 93 48.4
MBI06_g03313_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D000431 2.3e-08 62.8 103 43.7
CANSAT11G1436 Cannabis sativa HOM05D000086 ORTHO05D000431 3.0e-08 62.4 121 42.1
Haze_24826 Corylus avellana HOM05D000086 ORTHO05D000431 3.0e-08 62.4 93 47.3
Prupe.6G194300 Prunus persica HOM05D000086 ORTHO05D000431 3.0e-08 62.4 97 45.4
CiPaw.06G156200 Carya illinoinensis HOM05D000086 ORTHO05D000431 3.9e-08 62.0 117 39.3
Potri.017G049300 Populus trichocarpa HOM05D000086 ORTHO05D000431 8.6e-08 60.8 120 40.0
Gohir.A04G114700 Gossypium hirsutum HOM05D000086 ORTHO05D000431 1.5e-07 60.1 108 44.4
Haze_10564 Corylus avellana HOM05D000086 ORTHO05D000431 1.9e-07 59.7 118 45.8
SGA_v2.0_scaffold83G26340 Striga asiatica HOM05D000086 ORTHO05D000431 1.9e-07 59.7 92 42.4
Cc07_g14510 Coffea canephora HOM05D000086 ORTHO05D000431 2.5e-07 59.3 96 43.8
Gorai.012G143100 Gossypium raimondii HOM05D000086 ORTHO05D000431 3.3e-07 58.9 108 44.4
Cfa002589 Carpinus fangiana HOM05D000086 ORTHO05D000431 4.3e-07 58.5 93 45.2
Cfa018076 Carpinus fangiana HOM05D000086 ORTHO05D000431 4.3e-07 58.5 93 45.2
Gohir.D04G156100 Gossypium hirsutum HOM05D000086 ORTHO05D000431 4.3e-07 58.5 108 44.4
Oeu000876.1 Olea europaea HOM05D000086 ORTHO05D000431 5.6e-07 58.2 128 36.7
Peaxi162Scf00237g00125 Petunia axillaris HOM05D000086 ORTHO05D000431 5.6e-07 58.2 106 39.6
CiPaw.03G146500 Carya illinoinensis HOM05D000086 ORTHO05D000431 7.3e-07 57.8 95 44.2
Duzib132G0563 Durio zibethinus HOM05D000086 ORTHO05D000431 7.3e-07 57.8 115 40.9
MD01G1036900 Malus domestica HOM05D000086 ORTHO05D000431 7.3e-07 57.8 95 42.1
Actinidia01863 Actinidia chinensis HOM05D000086 ORTHO05D000431 9.5e-07 57.4 94 45.7
Nitab4.5_0000241g0150 Nicotiana tabacum HOM05D000086 ORTHO05D000431 9.5e-07 57.4 93 43.0
Sabra07G0091700 Salix brachista HOM05D000086 ORTHO05D000431 9.5e-07 57.4 120 40.0
PSO675G5884 Papaver somniferum HOM05D000086 ORTHO05D000431 1.2e-06 57.0 103 41.7
RcHm_v2.0_Chr2g0112241 Rosa chinensis HOM05D000086 ORTHO05D000431 1.6e-06 56.6 97 41.2
Thecc.08G100700 Theobroma cacao HOM05D000086 ORTHO05D000431 2.1e-06 56.2 114 34.2
Atru.chr6.1222 Acer truncatum HOM05D000086 ORTHO05D000431 2.8e-06 55.8 107 43.0
Ciclev10025698m.g Citrus clementina HOM05D000086 ORTHO05D000431 2.8e-06 55.8 98 42.9
Rhsim10G0169000 Rhododendron simsii HOM05D000086 ORTHO05D000431 2.8e-06 55.8 116 40.5
CSS0014171 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 3.6e-06 55.5 90 41.1
CSS0016182 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 4.7e-06 55.1 105 38.1
CSS0030238 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D043314 4.7e-06 55.1 105 38.1
Ciclev10005244m.g Citrus clementina HOM05D000086 ORTHO05D000431 6.2e-06 54.7 102 42.2
Eucgr.G00895 Eucalyptus grandis HOM05D000086 ORTHO05D000431 6.2e-06 54.7 120 41.7
RcHm_v2.0_Chr6g0291501 Rosa chinensis HOM05D000086 ORTHO05D000431 6.2e-06 54.7 96 42.7
TWI23G0195 Tripterygium wilfordii HOM05D000086 ORTHO05D000431 6.2e-06 54.7 94 42.6


User provided reference genes

Program Settings