Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 0.0e+00 1257.7 643 100.0
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 0.0e+00 1216.8 646 97.1
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.0e-298 1029.6 644 78.0
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 8.0e-296 1020.0 579 83.2
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 2.4e-292 1008.4 728 69.6
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 6.8e-287 990.3 579 79.6
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 6.3e-285 983.8 578 79.9
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 6.3e-285 983.8 583 79.8
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.6e-283 979.2 587 78.4
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 8.5e-282 973.4 587 78.9
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.5e-281 972.6 587 78.5
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.9e-281 972.2 587 78.7
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 2.7e-280 968.4 590 76.9
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 3.6e-280 968.0 587 78.2
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 3.6e-280 968.0 585 78.5
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 6.1e-280 967.2 588 77.4
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.2e-278 963.0 585 77.4
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 2.0e-278 962.2 583 77.5
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.0e-278 962.2 580 77.2
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.0e-278 962.2 577 78.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 4.4e-278 961.1 587 77.2
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.3e-277 959.5 583 77.9
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 3.7e-277 958.0 590 76.6
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.1e-276 956.4 577 77.6
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.8e-276 955.7 581 77.6
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 3.1e-276 954.9 625 73.6
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 7.0e-276 953.7 583 77.0
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 2.0e-275 952.2 586 76.1
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 2.0e-275 952.2 586 76.8
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.5e-275 951.0 583 77.2
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.3e-274 949.5 585 75.4
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 5.0e-274 947.6 581 76.2
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.9e-273 945.7 588 75.2
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 9.5e-273 943.3 592 75.0
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 2.8e-272 941.8 581 75.2
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.8e-272 941.8 611 73.8
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 6.1e-272 940.6 580 74.7
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.3e-269 932.9 579 75.8
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 2.2e-269 932.2 580 75.7
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 7.0e-268 927.2 586 76.3
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 3.5e-267 924.9 587 75.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.7e-266 922.5 643 73.6
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 3.9e-266 921.4 579 74.6
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.5e-265 919.5 579 74.4
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 1.9e-265 919.1 590 74.4
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.3e-265 918.3 578 75.3
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.6e-264 916.0 591 73.9
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.6e-264 916.0 583 73.8
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.6e-264 916.0 579 74.1
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.8e-264 915.2 577 74.4
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 4.7e-264 914.4 587 73.8
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.4e-263 912.9 584 73.5
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 4.0e-263 911.4 586 74.2
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.0e-262 909.1 581 73.8
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.0e-262 909.1 587 73.8
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.6e-262 908.7 581 73.7
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 9.8e-262 906.7 578 74.7
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 8.3e-261 903.7 591 73.4
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 2.7e-259 898.7 580 72.9
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.7e-258 896.0 587 72.4
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 8.6e-258 893.6 584 72.8
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 2.8e-256 888.6 644 70.8
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.1e-255 886.7 583 72.9
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 3.1e-255 885.2 583 73.1
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 5.2e-255 884.4 536 76.7
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.5e-254 882.9 583 72.7
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.0e-254 882.5 583 72.9
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.7e-253 879.4 583 72.2
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 3.2e-252 875.2 580 71.0
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 4.1e-252 874.8 581 72.8
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 9.2e-252 873.6 581 73.0
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.0e-250 870.2 594 71.5
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 1.3e-250 869.8 587 71.0
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.9e-245 852.0 584 71.1
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 1.9e-244 849.4 537 74.5
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 4.6e-243 844.7 581 70.4
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.1e-240 835.9 593 69.3
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 6.2e-240 834.3 596 69.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 5.2e-239 831.2 626 66.5
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 5.8e-238 827.8 584 68.7
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 8.4e-237 823.9 597 68.7
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 8.4e-237 823.9 597 68.7
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.4e-236 823.2 580 68.1
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.2e-236 822.0 595 68.4
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 4.6e-235 818.1 585 66.7
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.3e-233 812.0 545 70.5
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.6e-232 809.7 618 67.5
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.6e-232 809.7 596 67.1
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 4.0e-231 805.1 592 67.6
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 4.8e-224 781.6 585 64.3
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.2e-220 768.5 577 65.5
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 2.4e-207 726.1 584 61.5
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 3.3e-193 679.1 584 59.9
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 6.9e-191 671.4 552 59.4
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.4e-183 647.1 581 57.5
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 2.0e-182 643.3 585 56.1
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 4.2e-180 635.6 475 65.5
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 3.1e-175 619.4 591 53.8
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 4.1e-175 619.0 373 75.9
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.7e-168 597.0 598 52.5
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 1.7e-165 587.0 582 51.4
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.9e-143 513.8 516 54.7
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 1.2e-126 458.0 256 82.8
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 9.3e-95 352.1 210 76.2
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 1.1e-76 292.0 193 71.5
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 6.1e-70 269.6 196 64.8
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 2.0e-60 238.0 227 55.5
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 9.1e-50 202.6 107 83.2
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 5.7e-44 183.3 132 63.6
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 2.9e-27 127.9 80 77.5
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 3.5e-25 120.9 101 54.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.0e-24 119.4 65 78.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 2.5e-23 114.8 78 66.7
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 6.4e-19 100.1 76 63.2
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.1e-14 85.1 43 90.7
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 4.0e-13 80.9 133 40.6
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 5.2e-13 80.5 37 94.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 3.8e-11 74.3 42 76.2


User provided reference genes

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