Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 7.8e-106 387.1 192 100.0
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 7.8e-106 387.1 192 100.0
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 3.8e-68 261.9 198 71.7
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.1e-67 260.4 201 71.1
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 8.2e-63 244.2 199 69.8
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.8e-62 243.0 195 68.2
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.2e-61 240.4 211 66.4
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.0e-61 239.6 198 66.7
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.1e-59 233.8 193 66.8
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.2e-59 232.3 193 63.7
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.7e-58 229.2 197 62.9
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.7e-58 229.2 158 75.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.6e-58 228.8 197 62.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 4.6e-58 228.4 197 62.4
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 4.6e-58 228.4 157 73.2
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 7.9e-58 227.6 198 64.6
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.4e-57 226.9 184 66.8
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.4e-57 226.9 174 66.7
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.4e-57 226.9 179 67.6
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 2.3e-57 226.1 139 80.6
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 2.5e-56 222.6 138 77.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 4.3e-56 221.9 146 75.3
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 5.7e-56 221.5 165 67.9
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 5.7e-56 221.5 141 79.4
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 7.4e-56 221.1 200 61.5
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.3e-55 220.3 123 86.2
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.3e-55 220.3 189 64.6
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.7e-55 218.8 138 78.3
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 8.2e-55 217.6 178 65.7
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.4e-54 216.9 179 62.0
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.4e-54 216.9 198 60.6
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.4e-54 216.1 179 62.0
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 4.1e-54 215.3 185 62.7
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 6.9e-54 214.5 183 62.8
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.2e-53 213.8 153 71.2
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.2e-53 213.8 173 68.2
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 2.0e-53 213.0 154 71.4
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 2.0e-53 213.0 173 69.4
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.6e-53 212.6 172 65.1
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.4e-53 212.2 155 69.7
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 5.9e-53 211.5 180 65.6
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 2.9e-52 209.1 135 76.3
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.1e-51 207.2 185 63.2
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.1e-51 207.2 158 69.6
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.4e-51 206.8 114 88.6
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 3.2e-51 205.7 173 65.3
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 4.2e-51 205.3 175 64.6
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.2e-51 204.5 196 57.7
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.2e-50 203.8 145 70.3
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 2.7e-50 202.6 141 73.0
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.7e-50 202.6 136 72.1
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.7e-50 202.6 190 57.9
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.0e-49 200.7 135 78.5
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 3.0e-49 199.1 130 74.6
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 6.7e-49 198.0 144 69.4
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.6e-48 196.1 134 71.6
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.6e-48 196.1 126 74.6
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.3e-48 195.7 114 82.5
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 3.3e-48 195.7 152 67.8
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 4.4e-48 195.3 126 73.8
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 5.7e-48 194.9 161 65.8
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 5.7e-48 194.9 145 68.3
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 9.7e-48 194.1 124 75.8
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 9.7e-48 194.1 155 63.9
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 2.2e-47 193.0 138 69.6
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 7.0e-46 188.0 136 69.9
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 9.1e-46 187.6 179 59.2
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.5e-45 186.8 200 53.5
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 3.4e-45 185.7 149 67.8
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 5.9e-45 184.9 131 69.5
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 5.9e-45 184.9 131 69.5
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 5.9e-45 184.9 167 62.3
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 7.7e-45 184.5 144 65.3
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 7.7e-45 184.5 131 69.5
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.3e-44 183.7 141 68.8
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.7e-44 183.3 143 67.8
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.7e-44 183.3 130 69.2
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.7e-44 183.3 130 70.8
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.7e-44 183.3 130 70.8
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 2.9e-44 182.6 136 69.9
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 3.8e-44 182.2 176 57.4
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 8.5e-44 181.0 149 63.8
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.2e-43 178.7 136 70.6
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 7.2e-43 177.9 198 50.5
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.3e-41 172.9 121 73.6
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 3.0e-41 172.6 147 63.9
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 8.8e-41 171.0 200 51.0
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.1e-40 170.6 152 61.2
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.8e-38 163.3 132 65.2
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 3.8e-36 155.6 151 56.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 3.8e-36 155.6 151 56.3
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 5.0e-36 155.2 148 58.8
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 2.2e-31 139.8 137 52.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.0e-28 131.0 125 52.0
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 2.2e-28 129.8 124 54.0
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 2.9e-28 129.4 82 73.2
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 5.0e-28 128.6 317 30.9
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 5.0e-28 128.6 118 55.1
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 6.5e-28 128.3 82 73.2
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.0e-25 120.9 87 70.1
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.0e-25 119.4 87 69.0
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 5.9e-21 105.1 80 66.2
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 2.2e-15 86.7 53 79.2
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.6e-10 69.3 52 67.3
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 4.4e-08 62.4 85 48.2
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 2.4e-06 56.6 102 44.1
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 2.4e-06 56.6 103 40.8
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 2.4e-06 56.6 103 39.8
PRCOL_00005178 Prasinoderma coloniale HOM05D007282 ORTHO05D049198 9.2e-06 54.7 104 35.6


User provided reference genes

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