Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014673 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 9.9e-167 590.1 314 100.0
CSS0010437 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 1.1e-152 543.5 314 93.6
CSS0006602 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 5.4e-80 302.0 315 61.0
CSS0017035 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 7.1e-80 301.6 315 60.3
Dinv31629 Davidia involucrata HOM05D004679 ORTHO05D005524 6.0e-79 298.5 303 59.4
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla HOM05D004679 ORTHO05D005524 1.8e-67 260.4 324 58.3
Actinidia16661 Actinidia chinensis HOM05D004679 ORTHO05D005524 1.5e-66 257.3 314 51.3
Sopen05g005230 Solanum pennellii HOM05D004679 ORTHO05D005524 7.8e-63 245.0 312 51.0
Solyc05g009420.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 1.0e-62 244.6 312 51.0
TAR629G3220 Trochodendron aralioides HOM05D004679 ORTHO05D005524 5.6e-61 238.8 310 51.6
TAR371G1108 Trochodendron aralioides HOM05D004679 ORTHO05D005524 1.3e-60 237.7 313 44.1
Lj6P756T16 Lonicera japonica HOM05D004679 ORTHO05D005524 2.4e-59 233.4 316 48.7
Nitab4.5_0003715g0040 Nicotiana tabacum HOM05D004679 ORTHO05D005524 5.3e-59 232.3 315 45.1
Nitab4.5_0005669g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 6.9e-59 231.9 315 45.7
Thecc.02G227400 Theobroma cacao HOM05D004679 ORTHO05D005524 1.5e-58 230.7 322 48.1
Nn3g17866 Nelumbo nucifera HOM05D004679 ORTHO05D005524 7.6e-58 228.4 314 47.8
Cc11_g10010 Coffea canephora HOM05D004679 ORTHO05D005524 4.9e-57 225.7 341 50.4
Potri.008G121700 Populus trichocarpa HOM05D004679 ORTHO05D005524 1.1e-56 224.6 332 44.6
Manes.06G066900 Manihot esculenta HOM05D004679 ORTHO05D005524 1.9e-56 223.8 327 42.8
Ciclev10015600m.g Citrus clementina HOM05D004679 ORTHO05D005524 2.4e-56 223.4 346 45.4
Dinv21072 Davidia involucrata HOM05D004679 ORTHO05D005524 3.2e-56 223.0 227 53.3
Potri.010G123600 Populus trichocarpa HOM05D004679 ORTHO05D005524 3.2e-56 223.0 334 44.0
Sabra10G0093600 Salix brachista HOM05D004679 ORTHO05D005524 4.2e-56 222.6 332 47.9
PGSC0003DMG400014542 Solanum tuberosum HOM05D004679 ORTHO05D005524 7.1e-56 221.9 295 49.8
Nn4g23867 Nelumbo nucifera HOM05D004679 ORTHO05D005524 4.6e-55 219.2 323 47.1
Manes.14G103500 Manihot esculenta HOM05D004679 ORTHO05D005524 5.1e-54 215.7 323 46.7
COL.COLO4_05113 Corchorus olitorius HOM05D004679 ORTHO05D005524 8.7e-54 214.9 323 41.5
Sabra08G0092400 Salix brachista HOM05D004679 ORTHO05D005524 2.5e-53 213.4 330 46.7
Duzib268G0767 Durio zibethinus HOM05D004679 ORTHO05D005524 4.3e-53 212.6 322 43.8
Rhsim09G0106900 Rhododendron simsii HOM05D004679 ORTHO05D005524 1.3e-52 211.1 301 46.5
Migut.L01056 Erythranthe guttata HOM05D004679 ORTHO05D005524 2.0e-50 203.8 332 45.5
Duzib248G1266 Durio zibethinus HOM05D004679 ORTHO05D005524 5.8e-50 202.2 321 44.2
Gohir.A03G147600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 7.6e-50 201.8 322 41.0
Gorai.005G192000 Gossypium raimondii HOM05D004679 ORTHO05D005524 1.3e-49 201.1 323 41.5
MSTRG.848 Avicennia marina HOM05D004679 ORTHO05D005524 1.7e-49 200.7 323 42.4
FvH4_4g27210 Fragaria vesca HOM05D004679 ORTHO05D005524 3.8e-49 199.5 320 45.6
FAN12G3270 Fragaria x ananassa HOM05D004679 ORTHO05D005524 3.8e-49 199.5 320 45.3
SGA_v2.0_scaffold38G14941 Striga asiatica HOM05D004679 ORTHO05D005524 8.4e-49 198.4 317 41.3
TWI79G1695 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 1.1e-48 198.0 318 45.0
FAN12G2517 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.4e-48 197.6 320 45.0
FAN07G0705 Fragaria x ananassa HOM05D004679 ORTHO05D005524 5.5e-48 195.7 320 40.6
FAN22G1304 Fragaria x ananassa HOM05D004679 ORTHO05D005524 7.1e-48 195.3 320 44.7
MSTRG.7662 Avicennia marina HOM05D004679 ORTHO05D005524 9.3e-48 194.9 321 43.6
RcHm_v2.0_Chr4g0435001 Rosa chinensis HOM05D004679 ORTHO05D005524 1.2e-47 194.5 321 43.9
Oeu003185.3 Olea europaea HOM05D004679 ORTHO05D005524 1.6e-47 194.1 315 41.3
Atru.chr11.115 Acer truncatum HOM05D004679 ORTHO05D005524 2.7e-47 193.4 337 43.9
CiPaw.15G086800 Carya illinoinensis HOM05D004679 ORTHO05D005524 8.7e-46 188.3 311 38.6
QL01p041129 Quercus lobata HOM05D004679 ORTHO05D005524 5.6e-45 185.7 313 44.7
TWI31G1336 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 9.6e-45 184.9 308 45.8
MBI09_g16518_MAGBIO Magnolia biondii HOM05D004679 ORTHO05D005524 1.3e-44 184.5 312 37.2
CiPaw.16G065600 Carya illinoinensis HOM05D004679 ORTHO05D005524 3.1e-43 179.9 322 41.0
Duzib251G0437 Durio zibethinus HOM05D004679 ORTHO05D005524 1.2e-42 177.9 301 40.2
Phvul.003G030600 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 2.6e-42 176.8 309 35.9
VMungo1215G2497 Vigna mungo HOM05D004679 ORTHO05D005524 3.4e-42 176.4 311 40.2
Sc14g0007400 Simmondsia chinensis HOM05D004679 ORTHO05D005524 4.5e-42 176.0 314 42.7
SGA_v2.0_scaffold36G14543 Striga asiatica HOM05D004679 ORTHO05D005524 7.6e-42 175.3 322 41.0
THA.LOC104821925 Tarenaya hassleriana HOM05D004679 ORTHO05D005524 2.2e-41 173.7 323 44.6
CsaV3_5G034410 Cucumis sativus L. HOM05D004679 ORTHO05D005524 2.9e-41 173.3 326 36.2
TPR.G27958 Trifolium pratense HOM05D004679 ORTHO05D005524 3.8e-41 172.9 324 36.4
Gohir.A04G097850 Gossypium hirsutum HOM05D004679 ORTHO05D005524 1.9e-40 170.6 317 37.5
MELO3C012256.2 Cucumis melo HOM05D004679 ORTHO05D005524 3.2e-40 169.9 326 36.2
SalBow8G2470 Salvia bowleyana HOM05D004679 ORTHO05D005524 5.5e-40 169.1 306 37.3
Gohir.D02G170800 Gossypium hirsutum HOM05D004679 ORTHO05D005524 1.6e-39 167.5 276 41.3
Psat2g095800 Pisum sativum HOM05D004679 ORTHO05D005524 2.1e-39 167.2 307 40.7
Glyma.08G261000 Glycine max HOM05D004679 ORTHO05D005524 2.7e-39 166.8 309 40.5
Nitab4.5_0005548g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 3.5e-39 166.4 285 40.4
Nitab4.5_0000057g0200 Nicotiana tabacum HOM05D004679 ORTHO05D005524 4.6e-39 166.0 284 41.5
ClCG05G022630 Citrullus lanatus HOM05D004679 ORTHO05D005524 7.9e-39 165.2 325 35.7
Aqoxy3G00274 Aquilegia oxysepala HOM05D004679 ORTHO05D005524 1.8e-38 164.1 308 42.5
CANSAT01G1145 Cannabis sativa HOM05D004679 ORTHO05D005524 1.9e-37 160.6 326 42.3
Cfa018585 Carpinus fangiana HOM05D004679 ORTHO05D005524 1.9e-37 160.6 320 43.8
Prupe.1G312600 Prunus persica HOM05D004679 ORTHO05D005524 3.3e-37 159.8 330 38.5
Eucgr.B03012 Eucalyptus grandis HOM05D004679 ORTHO05D005524 1.3e-36 157.9 323 35.6
Medtr5g056480 Medicago truncatula HOM05D004679 ORTHO05D005524 1.6e-36 157.5 323 38.1
MD13G1040500 Malus domestica HOM05D004679 ORTHO05D005524 2.1e-36 157.1 328 36.0
Cpa.g.sc1.28 Carica papaya HOM05D004679 ORTHO05D005524 2.8e-36 156.8 201 46.8
Haze_17496 Corylus avellana HOM05D004679 ORTHO05D005524 4.8e-36 156.0 306 44.1
BcaB03g15806 Brassica carinata HOM05D004679 ORTHO05D005524 8.2e-36 155.2 319 37.3
Glyma.01G080500 Glycine max HOM05D004679 ORTHO05D005524 1.8e-35 154.1 314 38.5
Ca_07534_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 2.4e-35 153.7 318 40.9
Oeu034235.1 Olea europaea HOM05D004679 ORTHO05D005524 3.1e-35 153.3 319 39.5
BcaC08g46281 Brassica carinata HOM05D004679 ORTHO05D005524 4.1e-35 152.9 321 40.8
BcaC08g46285 Brassica carinata HOM05D004679 ORTHO05D005524 4.1e-35 152.9 321 40.8
C06p41510 Brassica napus HOM05D004679 ORTHO05D005524 4.1e-35 152.9 321 41.4
BolC6t39272H Brassica oleracea HOM05D004679 ORTHO05D005524 4.1e-35 152.9 321 41.4
A07p34850 Brassica napus HOM05D004679 ORTHO05D005524 6.9e-35 152.1 321 41.1
Sp5g23510 Schrenkiella parvula HOM05D004679 ORTHO05D005524 6.9e-35 152.1 328 40.5
Lsat_1_v5_gn_4_15920 Lactuca sativa HOM05D004679 ORTHO05D005524 1.2e-34 151.4 266 44.4
BcaB05g24380 Brassica carinata HOM05D004679 ORTHO05D005524 1.5e-34 151.0 326 40.2
MD16G1041500 Malus domestica HOM05D004679 ORTHO05D005524 1.5e-34 151.0 330 39.7
BolC2t08557H Brassica oleracea HOM05D004679 ORTHO05D005524 3.4e-34 149.8 330 40.3
AL2G27300 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 4.5e-34 149.4 328 39.6
A02p14990 Brassica napus HOM05D004679 ORTHO05D005524 1.0e-33 148.3 330 40.6
C02p24550 Brassica napus HOM05D004679 ORTHO05D005524 1.0e-33 148.3 332 40.1
BcaC03g14945 Brassica carinata HOM05D004679 ORTHO05D005524 1.7e-33 147.5 328 40.2
Lalb_Chr10g0100061 Lupinus albus HOM05D004679 ORTHO05D005524 2.2e-33 147.1 298 37.9
Thhalv10018918m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 1.1e-32 144.8 326 39.3
PGR102G2503 Punica granatum HOM05D004679 ORTHO05D005524 1.4e-32 144.4 334 40.4
Carub.0002s1495 Capsella rubella HOM05D004679 ORTHO05D005524 2.5e-32 143.7 331 39.0
Lj2g0027656 Lotus japonicus HOM05D004679 ORTHO05D005524 2.5e-32 143.7 318 37.4
AT1G68440 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 4.2e-32 142.9 329 36.2
Lalb_Chr04g0254681 Lupinus albus HOM05D004679 ORTHO05D005524 2.7e-31 140.2 308 32.8
CARHR061220 Cardamine hirsuta HOM05D004679 ORTHO05D005524 1.8e-30 137.5 324 38.0
PGSC0003DMG400005982 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.8e-30 137.5 304 36.5
BraA02t06566Z Brassica rapa HOM05D004679 ORTHO05D005524 3.0e-30 136.7 328 38.4
Ah.03g137540 Amaranthus hybridus HOM05D004679 ORTHO05D005524 3.9e-30 136.3 293 42.3
Gohir.D04G137600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 5.1e-30 136.0 312 35.3
Gorai.012G122000 Gossypium raimondii HOM05D004679 ORTHO05D005524 2.5e-29 133.7 312 34.9
Solyc04g007250.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 4.3e-29 132.9 304 34.9
HanXRQChr16g0529431 Helianthus annuus HOM05D004679 ORTHO05D005524 9.7e-29 131.7 275 44.7
Sopen04g002310 Solanum pennellii HOM05D004679 ORTHO05D005524 9.7e-29 131.7 304 35.5
DCAR_030166 Daucus carota HOM05D004679 ORTHO05D005524 6.3e-28 129.0 303 34.3
CDE06G1731 Ceratophyllum demersum HOM05D004679 ORTHO05D005524 1.4e-27 127.9 310 31.0
Sed0013939 Sechium edule HOM05D004679 ORTHO05D005524 3.1e-27 126.7 329 32.5
DCAR_026738 Daucus carota HOM05D004679 ORTHO05D005524 4.1e-27 126.3 303 35.0
Ah.02g128020 Amaranthus hybridus HOM05D004679 ORTHO05D005524 5.9e-26 122.5 321 39.6
Psat6g226440 Pisum sativum HOM05D004679 ORTHO05D005524 5.9e-26 122.5 159 45.3
ClCG08G005010 Citrullus lanatus HOM05D004679 ORTHO05D005524 1.4e-24 117.9 317 30.3
CsaV3_6G003280 Cucumis sativus L. HOM05D004679 ORTHO05D005524 1.4e-24 117.9 319 30.7
Sp1g22820 Schrenkiella parvula HOM05D004679 ORTHO05D005524 3.2e-24 116.7 308 38.0
BcaB03g14040 Brassica carinata HOM05D004679 ORTHO05D005524 5.5e-24 115.9 308 33.4
EL10Ac6g14380 Beta vulgaris HOM05D004679 ORTHO05D005524 3.6e-23 113.2 302 37.7
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea HOM05D004679 ORTHO05D005524 4.6e-23 112.8 297 33.7
Glyma.20G116700 Glycine max HOM05D004679 ORTHO05D005524 1.4e-22 111.3 191 35.6
BcaC06g35214 Brassica carinata HOM05D004679 ORTHO05D005524 3.0e-22 110.2 313 35.5
C07p18590 Brassica napus HOM05D004679 ORTHO05D005524 3.0e-22 110.2 313 35.5
BolC7t42370H Brassica oleracea HOM05D004679 ORTHO05D005524 3.0e-22 110.2 313 35.5
Sed0011079 Sechium edule HOM05D004679 ORTHO05D005524 6.7e-22 109.0 328 28.7
TPR.G18826 Trifolium pratense HOM05D004679 ORTHO05D005524 6.7e-22 109.0 270 39.6
AL1G39920 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 8.8e-22 108.6 310 36.1
MELO3C011535.2 Cucumis melo HOM05D004679 ORTHO05D005524 8.8e-22 108.6 319 30.4
Ca_11162_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 1.1e-21 108.2 269 37.2
Sed0007978 Sechium edule HOM05D004679 ORTHO05D005524 2.6e-21 107.1 298 29.9
AT1G25400 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 3.3e-21 106.7 308 33.8
Glyma.10G273200 Glycine max HOM05D004679 ORTHO05D005524 1.3e-20 104.8 195 34.9
BraA07t29036Z Brassica rapa HOM05D004679 ORTHO05D005524 6.3e-20 102.4 310 31.0
A07p12580 Brassica napus HOM05D004679 ORTHO05D005524 4.1e-19 99.8 310 31.9
VMungo0720G2998 Vigna mungo HOM05D004679 ORTHO05D005524 4.1e-19 99.8 251 36.7
Eucgr.G02311 Eucalyptus grandis HOM05D004679 ORTHO05D005524 5.3e-19 99.4 305 37.0
Carub.0001s2510 Capsella rubella HOM05D004679 ORTHO05D005524 1.2e-18 98.2 303 30.7
Thhalv10008406m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 1.2e-18 98.2 301 33.9
CARHR026080 Cardamine hirsuta HOM05D004679 ORTHO05D005524 2.6e-18 97.1 304 34.2
AUR62035202 Chenopodium quinoa HOM05D004679 ORTHO05D005524 1.0e-17 95.1 207 39.1
Phvul.007G028300 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 1.3e-17 94.7 262 37.8
Medtr1g110550 Medicago truncatula HOM05D004679 ORTHO05D005524 2.5e-16 90.5 157 38.2
PSO017G6556 Papaver somniferum HOM05D004679 ORTHO05D005524 2.1e-15 87.4 288 36.8
Lalb_Chr21g0308861 Lupinus albus HOM05D004679 ORTHO05D005524 2.0e-13 80.9 298 27.9
Aa31LG7G9090 Aethionema arabicum HOM05D004679 ORTHO05D005524 5.7e-13 79.3 298 33.2
Gohir.A05G321608 Gossypium hirsutum HOM05D004679 ORTHO05D005524 7.4e-13 79.0 246 33.3
Peaxi162Scf00753g00057 Petunia axillaris HOM05D004679 ORTHO05D005524 9.7e-13 78.6 307 32.2
ECA234G4300 Erigeron canadensis HOM05D004679 ORTHO05D005524 1.7e-12 77.8 130 38.5
Lalb_Chr06g0166021 Lupinus albus HOM05D004679 ORTHO05D005524 1.6e-10 71.2 297 27.9
Lj5g0021418 Lotus japonicus HOM05D004679 ORTHO05D005524 3.5e-10 70.1 161 34.8
SEGI_14232 Sequoiadendron giganteum HOM05D017838 ORTHO05D018381 8.0e-07 58.9 161 27.3


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