Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 6.6e-128 460.7 229 100.0
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 3.3e-127 458.4 229 99.1
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.8e-101 372.9 229 82.1
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 2.4e-101 372.5 232 81.0
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 3.5e-97 358.6 229 78.2
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 5.9e-92 341.3 227 74.4
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 7.9e-89 330.9 222 74.3
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.4e-88 330.1 207 79.7
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 6.7e-88 327.8 227 70.9
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.1e-87 327.0 231 69.3
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 2.5e-87 325.9 213 73.2
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.3e-86 323.6 225 70.7
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 8.2e-86 320.9 219 72.1
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.4e-85 320.1 230 70.4
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 9.1e-85 317.4 225 69.8
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 2.0e-84 316.2 212 72.2
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 3.4e-84 315.5 223 70.0
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 5.9e-84 314.7 229 69.4
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 7.7e-84 314.3 212 72.2
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 1.3e-83 313.5 213 70.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.7e-83 313.2 219 70.8
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.7e-83 313.2 227 68.7
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 3.8e-83 312.0 233 69.5
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.4e-82 310.1 213 73.2
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 1.4e-82 310.1 217 71.4
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 3.2e-82 308.9 219 69.9
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 4.2e-82 308.5 224 67.9
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 5.5e-82 308.1 219 70.3
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 7.2e-82 307.8 234 69.2
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 1.6e-81 306.6 232 64.7
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 4.7e-81 305.1 231 66.2
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 4.7e-81 305.1 185 78.4
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 6.1e-81 304.7 224 67.9
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.9e-81 304.3 219 68.5
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 7.9e-81 304.3 219 68.5
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 7.9e-81 304.3 217 70.0
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.0e-80 303.9 218 70.2
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 1.0e-80 303.9 216 70.4
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.8e-80 303.1 219 69.4
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.0e-80 302.4 228 66.2
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 6.7e-80 301.2 229 66.8
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 8.8e-80 300.8 212 70.8
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 8.8e-80 300.8 212 70.3
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 2.0e-79 299.7 219 68.0
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 2.6e-79 299.3 217 68.2
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 3.3e-79 298.9 217 66.8
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 3.3e-79 298.9 216 69.9
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.3e-79 298.9 219 67.6
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 4.4e-79 298.5 225 66.7
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 5.7e-79 298.1 212 68.4
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 5.7e-79 298.1 212 69.8
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 5.7e-79 298.1 217 66.8
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 9.7e-79 297.4 230 66.5
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 9.7e-79 297.4 212 70.3
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 2.2e-78 296.2 229 62.9
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.7e-78 295.4 229 62.4
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 6.3e-78 294.7 212 65.1
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 8.2e-78 294.3 225 65.3
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.1e-77 293.9 217 64.5
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 3.1e-77 292.4 216 66.7
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 7.0e-77 291.2 224 65.2
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 7.0e-77 291.2 216 66.2
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.5e-76 288.9 231 63.2
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 5.9e-76 288.1 217 63.6
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 5.0e-75 285.0 225 65.8
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 5.0e-75 285.0 235 60.4
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 2.5e-74 282.7 213 66.7
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 2.5e-74 282.7 219 63.0
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 2.5e-74 282.7 217 62.7
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 2.5e-74 282.7 217 65.0
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.6e-73 280.0 229 62.0
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 1.6e-73 280.0 217 62.2
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 3.6e-73 278.9 224 61.2
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 8.0e-73 277.7 228 61.4
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.0e-72 277.3 212 65.1
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 3.0e-72 275.8 217 60.4
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 3.9e-72 275.4 212 63.7
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.1e-71 273.9 218 61.5
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.6e-71 272.7 214 61.7
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 4.4e-71 271.9 214 61.7
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 7.4e-71 271.2 212 63.2
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 1.7e-70 270.0 219 61.2
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.7e-70 270.0 211 65.4
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.8e-69 266.5 232 60.3
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 2.0e-68 263.1 216 61.6
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 4.5e-68 261.9 228 58.3
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 5.9e-68 261.5 219 59.8
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 5.9e-68 261.5 219 59.8
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 5.9e-68 261.5 219 59.8
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 5.9e-68 261.5 219 59.8
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 3.8e-67 258.8 233 57.1
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 3.8e-67 258.8 273 50.9
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 5.0e-67 258.5 229 59.0
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 6.5e-67 258.1 223 59.6
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 1.1e-66 257.3 226 58.0
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 1.5e-66 256.9 229 57.2
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 4.2e-66 255.4 191 64.4
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.5e-66 255.0 139 86.3
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.3e-64 249.6 232 56.9
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 6.8e-64 248.1 210 56.2
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 2.6e-63 246.1 220 54.5
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 9.7e-63 244.2 145 78.6
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.2e-62 243.0 215 56.3
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 3.5e-60 235.7 143 78.3
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 2.9e-59 232.6 158 71.5
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.6e-55 219.5 145 74.5
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.7e-54 216.9 145 70.3
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.2e-52 210.7 215 50.7
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.5e-52 208.8 213 52.1
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 2.9e-43 179.5 127 65.4
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 5.8e-39 165.2 115 68.7
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.0e-27 127.9 192 38.5
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 4.9e-14 82.4 223 28.3
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 2.1e-12 77.0 118 37.3
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.7e-12 76.6 56 71.4


User provided reference genes

Program Settings