Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 8.8e-102 373.6 189 100.0
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 4.4e-101 371.3 189 99.5
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 4.2e-80 301.6 191 79.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.3e-76 290.0 192 78.1
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.3e-76 290.0 192 78.1
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.7e-76 289.7 191 76.4
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 3.7e-76 288.5 189 77.8
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.2e-74 283.5 201 72.1
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 1.6e-74 283.1 192 74.5
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 5.9e-74 281.2 198 73.2
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.7e-73 279.6 194 74.2
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.9e-73 278.9 216 70.8
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 3.8e-73 278.5 191 73.3
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 3.8e-73 278.5 198 72.7
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 5.0e-73 278.1 191 73.8
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 5.0e-73 278.1 189 74.6
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 6.6e-73 277.7 191 74.9
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.1e-72 276.9 192 72.9
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.5e-72 276.6 200 72.0
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.5e-72 275.8 191 72.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.3e-72 275.4 202 74.3
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 2.1e-71 272.7 191 72.3
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.1e-71 272.7 189 71.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 2.8e-71 272.3 191 72.8
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 3.6e-71 271.9 191 73.8
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 3.6e-71 271.9 189 72.5
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 6.1e-71 271.2 191 72.3
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 8.0e-71 270.8 191 71.2
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.0e-70 270.4 191 71.2
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.4e-70 270.0 185 75.1
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 2.3e-70 269.2 191 72.8
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 3.1e-70 268.9 188 69.1
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.1e-70 268.9 191 69.1
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.1e-70 268.9 191 71.2
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 4.0e-70 268.5 191 71.2
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 4.0e-70 268.5 190 69.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 5.2e-70 268.1 185 74.6
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 6.8e-70 267.7 191 70.2
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 8.9e-70 267.3 194 69.1
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 2.6e-69 265.8 191 71.7
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 2.6e-69 265.8 187 69.5
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 3.4e-69 265.4 191 69.1
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.4e-69 265.4 195 72.3
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 3.4e-69 265.4 185 72.4
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 7.5e-69 264.2 190 70.5
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.7e-68 263.1 190 68.9
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.7e-68 263.1 191 68.1
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 2.9e-68 262.3 195 68.7
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 2.9e-68 262.3 194 69.1
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 8.3e-68 260.8 192 68.8
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.1e-67 260.4 183 73.2
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.9e-67 259.6 189 67.7
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.9e-67 259.6 189 67.7
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.9e-67 259.6 185 71.9
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.4e-67 259.2 191 70.7
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.4e-67 259.2 189 67.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.4e-67 259.2 187 68.4
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 3.2e-67 258.8 189 68.3
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 4.1e-67 258.5 189 68.3
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.1e-67 258.5 189 68.3
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 4.1e-67 258.5 189 68.3
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 5.4e-67 258.1 189 66.1
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 7.0e-67 257.7 191 70.2
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 9.2e-67 257.3 189 67.7
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.2e-66 256.9 191 67.0
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.6e-66 256.5 191 67.0
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.6e-66 256.5 191 67.0
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.6e-66 256.5 185 71.4
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.7e-66 255.8 189 68.3
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.5e-66 255.4 188 66.5
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.6e-66 255.0 191 67.0
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 6.0e-66 254.6 189 68.3
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 7.8e-66 254.2 196 65.8
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 7.8e-66 254.2 189 67.2
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.0e-65 253.8 189 68.3
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 1.7e-65 253.1 187 66.3
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.7e-65 253.1 189 67.7
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 2.3e-65 252.7 188 64.9
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 5.0e-65 251.5 181 71.8
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 6.6e-65 251.1 185 65.4
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 8.6e-65 250.8 199 64.8
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.5e-64 250.0 200 64.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 3.3e-64 248.8 189 65.6
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 7.3e-64 247.7 190 66.8
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 2.1e-63 246.1 158 82.9
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 6.2e-63 244.6 189 65.6
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 8.0e-63 244.2 188 64.9
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 8.0e-63 244.2 187 64.7
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.6e-61 239.2 154 79.2
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 4.4e-61 238.4 189 69.8
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.6e-58 229.9 263 52.5
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 3.9e-57 225.3 191 63.9
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.6e-55 219.9 156 75.0
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.2e-53 213.8 158 71.5
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.3e-52 210.3 158 69.0
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.2e-50 203.8 185 55.7
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.6e-50 203.4 174 62.6
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 2.1e-50 203.0 186 54.3
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 6.0e-50 201.4 189 52.4
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 7.8e-50 201.1 156 66.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 5.6e-48 194.9 162 63.0
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 7.6e-45 184.5 132 74.2
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.3e-44 183.7 191 53.9
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 4.2e-43 178.7 156 59.6
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 2.7e-42 176.0 138 61.6
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 2.7e-42 176.0 152 59.9
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.3e-41 173.7 195 51.3
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.5e-40 170.2 192 49.0
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.4e-35 152.9 190 45.3
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 3.0e-33 146.0 189 43.9
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 2.2e-28 129.8 185 41.6
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.1e-26 123.2 190 43.7
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 4.8e-23 112.1 70 75.7
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.4e-14 84.0 56 76.8
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.8e-06 57.0 87 43.7


User provided reference genes

Program Settings