Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 7.9e-62 240.7 168 100.0
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.4e-42 176.8 168 80.4
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.1e-42 175.6 168 78.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.7e-40 169.9 169 76.3
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.8e-40 168.7 169 76.3
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.8e-40 168.7 169 76.3
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 3.2e-39 165.6 162 77.2
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 4.2e-39 165.2 168 74.4
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.7e-38 162.5 170 76.5
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 3.6e-38 162.2 164 78.0
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 6.1e-38 161.4 170 75.3
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 5.2e-37 158.3 163 74.8
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 6.7e-37 157.9 170 73.5
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.1e-36 157.1 167 77.8
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.5e-36 156.8 166 74.1
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.5e-36 156.8 166 74.1
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.5e-36 156.8 167 75.4
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.0e-36 156.4 166 73.5
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 2.0e-36 156.4 168 75.0
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 4.4e-36 155.2 174 72.4
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 5.7e-36 154.8 163 73.6
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 7.5e-36 154.5 169 76.3
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 7.5e-36 154.5 166 76.5
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 9.7e-36 154.1 170 74.1
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 9.7e-36 154.1 172 73.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 3.7e-35 152.1 170 74.1
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 6.3e-35 151.4 165 72.7
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 6.3e-35 151.4 164 73.2
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 6.3e-35 151.4 167 76.0
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.1e-34 150.6 171 73.7
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.4e-34 150.2 106 75.5
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.8e-34 149.8 169 74.0
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 1.8e-34 149.8 168 71.4
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 3.1e-34 149.1 172 72.1
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 5.3e-34 148.3 169 72.8
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 7.0e-34 147.9 168 72.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.6e-33 146.7 178 70.2
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.6e-33 146.7 166 72.9
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.0e-33 146.4 171 71.3
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 3.5e-33 145.6 163 74.8
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 5.9e-33 144.8 163 73.0
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 5.9e-33 144.8 172 71.5
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 7.7e-33 144.4 163 74.8
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 7.7e-33 144.4 166 73.5
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.0e-32 144.1 168 71.4
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.0e-32 144.1 165 73.9
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.7e-32 143.3 163 72.4
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.7e-32 143.3 173 71.1
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.9e-32 142.5 164 72.0
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 5.0e-32 141.7 163 73.6
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 5.0e-32 141.7 146 77.4
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 6.5e-32 141.4 164 73.2
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 8.5e-32 141.0 167 71.9
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 1.1e-31 140.6 163 68.1
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.9e-31 139.8 163 72.4
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.9e-31 139.8 163 73.0
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 70.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 4.2e-31 138.7 129 83.7
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 5.5e-31 138.3 163 71.8
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 5.5e-31 138.3 163 73.0
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 5.5e-31 138.3 163 71.8
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 5.5e-31 138.3 163 73.0
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 5.5e-31 138.3 127 85.8
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 9.4e-31 137.5 132 81.1
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.2e-30 137.1 165 71.5
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 122 85.2
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.2e-30 137.1 122 85.2
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.6e-30 136.7 174 68.4
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.1e-30 136.3 165 69.7
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 2.7e-30 136.0 163 71.2
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 4.7e-30 135.2 165 70.9
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.0e-29 134.0 127 66.9
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 3.0e-29 132.5 104 66.3
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 5.2e-29 131.7 132 81.8
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 5.2e-29 131.7 169 68.6
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 8.8e-29 131.0 134 80.6
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.2e-28 130.6 133 81.2
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.3e-27 127.1 127 81.9
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.4e-26 123.6 127 67.7
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 1.8e-26 123.2 134 72.4
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 4.1e-26 122.1 124 77.4
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 3.5e-25 119.0 153 68.0
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 5.9e-25 118.2 119 83.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 7.7e-25 117.9 161 56.5
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.3e-24 117.1 123 81.3
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.7e-24 116.7 157 70.1
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 3.8e-24 115.5 132 73.5
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 8.0e-22 107.8 125 74.4
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 8.0e-22 107.8 99 63.6
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.4e-21 107.1 169 62.1
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 5.2e-21 105.1 118 48.3
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.5e-20 103.6 113 74.3
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.8e-18 96.7 128 48.4
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.6e-17 93.6 130 70.0
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 8.6e-16 87.8 168 56.0
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.5e-15 87.0 124 66.9
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 4.7e-14 82.0 89 70.8
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.3e-11 73.9 114 64.9
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 6.4e-11 71.6 100 39.0
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.1e-10 70.9 65 56.9
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.7e-09 66.2 40 72.5
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 4.6e-09 65.5 117 65.8
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 3.6e-06 55.8 33 81.8


User provided reference genes

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