Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.1e-95 354.8 503 100.0
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 6.9e-77 292.4 607 82.4
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 4.5e-68 263.1 505 82.0
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 3.5e-57 226.9 228 61.0
CSS0037889 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.2e-44 185.3 133 75.2
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 7.4e-39 166.0 167 53.9
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 4.8e-38 163.3 169 52.7
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 3.4e-36 157.1 138 63.8
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 2.5e-34 151.0 134 61.9
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 5.5e-34 149.8 135 63.0
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 9.4e-34 149.1 152 52.6
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 9.4e-34 149.1 148 52.7
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 2.1e-33 147.9 148 51.4
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 1.8e-32 144.8 148 51.4
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 3.0e-32 144.1 150 51.3
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 3.0e-32 144.1 150 52.0
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 3.0e-32 144.1 150 52.7
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 5.1e-32 143.3 150 51.3
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 8.8e-32 142.5 148 52.0
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.5e-31 141.7 148 51.4
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 1.5e-31 141.7 148 50.7
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 3.3e-31 140.6 150 52.7
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 3.3e-31 140.6 140 54.3
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 7.4e-31 139.4 175 45.7
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 7.4e-31 139.4 172 47.7
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 1.3e-30 138.7 150 49.3
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 1.7e-30 138.3 149 51.7
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 1.7e-30 138.3 148 50.7
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 4.8e-30 136.7 174 44.8
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 4.8e-30 136.7 156 50.6
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 6.3e-30 136.3 146 50.7
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 1.1e-29 135.6 147 49.7
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 1.4e-29 135.2 151 49.0
CSS0037045 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.8e-29 134.8 70 92.9
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 4.1e-29 133.7 171 46.8
CSS0022359 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 4.5e-28 130.2 70 91.4
Gohir.A09G060400 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.0e-27 129.0 150 46.0
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 1.0e-27 129.0 150 48.0
Atru.chr4.2678 Acer truncatum HOM05D007340 ORTHO05D008979 2.9e-27 127.5 152 46.7
Atru.chr4.2685 Acer truncatum HOM05D007340 ORTHO05D008979 2.9e-27 127.5 152 46.7
Gohir.D09G059500 Gossypium hirsutum HOM05D001150 ORTHO05D008979 3.8e-27 127.1 150 45.3
Gorai.006G074200 Gossypium raimondii HOM05D001150 ORTHO05D008979 3.8e-27 127.1 150 45.3
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 6.5e-27 126.3 147 46.9
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 8.5e-27 125.9 162 45.7
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 2.5e-26 124.4 178 43.3
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 4.2e-26 123.6 165 44.2
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 7.2e-26 122.9 150 46.0
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 9.4e-26 122.5 166 44.0
Medtr5g094770 Medicago truncatula HOM05D007340 ORTHO05D008979 1.6e-25 121.7 173 44.5
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 2.7e-25 120.9 147 46.3
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 3.6e-25 120.6 150 47.3
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 3.6e-25 120.6 153 43.1
CANSAT78G0497 Cannabis sativa HOM05D007340 ORTHO05D008979 6.1e-25 119.8 152 42.8
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 1.8e-24 118.2 175 40.6
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 3.9e-24 117.1 154 42.9
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 1.1e-23 115.5 150 44.0
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 5.7e-23 113.2 147 42.9
FAN12G4271 Fragaria x ananassa HOM05D007340 ORTHO05D008979 1.7e-22 111.7 126 46.0
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 2.2e-22 111.3 127 45.7
FvH4_4g14110 Fragaria vesca HOM05D007340 ORTHO05D008979 3.7e-22 110.5 126 46.0
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 1.1e-21 109.0 140 45.7
Manes.03G186900 Manihot esculenta HOM05D007340 ORTHO05D008979 5.9e-20 103.2 120 44.2
RcHm_v2.0_Chr4g0419121 Rosa chinensis HOM05D007340 ORTHO05D008979 1.0e-19 102.4 128 45.3
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.7e-19 101.7 131 43.5
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 6.5e-19 99.8 145 42.8
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 8.5e-19 99.4 148 40.5
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 8.5e-19 99.4 151 35.8
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 1.9e-18 98.2 146 35.6
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 4.2e-18 97.1 151 37.7
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 5.5e-18 96.7 148 32.4
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 1.2e-17 95.5 151 35.8
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 2.1e-17 94.7 151 36.4
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 2.7e-17 94.4 149 39.6
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 2.7e-17 94.4 178 37.1
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 6.1e-17 93.2 150 35.3
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 6.1e-17 93.2 149 38.9
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 1.0e-16 92.4 151 35.1
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 1.4e-16 92.0 173 31.2
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.8e-16 91.7 133 40.6
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 1.8e-16 91.7 142 38.0
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 4.0e-16 90.5 151 33.1
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 8.8e-16 89.4 149 37.6
Lsat_1_v5_gn_8_10680 Lactuca sativa HOM05D007340 ORTHO05D008979 4.4e-15 87.0 124 40.3
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 2.8e-14 84.3 61 62.3
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 4.8e-14 83.6 152 33.6
TPR.G40710 Trifolium pratense HOM05D007340 ORTHO05D008979 2.4e-13 81.3 64 60.9
BcaB01g05283 Brassica carinata HOM05D007340 ORTHO05D008979 5.3e-13 80.1 129 33.3
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 2.0e-12 78.2 145 35.9
TPR.G28181 Trifolium pratense HOM05D007340 ORTHO05D008979 2.0e-12 78.2 127 40.2
RcHm_v2.0_Chr4g0419111 Rosa chinensis HOM05D007340 ORTHO05D008979 5.9e-12 76.6 60 56.7
Gohir.D08G046350 Gossypium hirsutum HOM05D007340 ORTHO05D008979 1.0e-11 75.9 102 41.2
Gorai.004G045600 Gossypium raimondii HOM05D007340 ORTHO05D008979 1.0e-11 75.9 102 41.2
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 3.8e-11 73.9 176 32.4
HanXRQChr17g0539051 Helianthus annuus HOM05D007340 ORTHO05D008979 8.5e-11 72.8 92 41.3
Lsat_1_v5_gn_5_93381 Lactuca sativa HOM05D007340 ORTHO05D008979 2.5e-10 71.2 91 40.7
TPR.G14140 Trifolium pratense HOM05D007340 ORTHO05D008979 3.2e-10 70.9 82 46.3
HanXRQChr10g0314401 Helianthus annuus HOM05D007340 ORTHO05D008979 4.2e-10 70.5 93 38.7
Prupe.1G570100 Prunus persica HOM05D007340 ORTHO05D008979 1.0e-08 65.9 56 62.5
Nn1g01889 Nelumbo nucifera HOM05D007340 ORTHO05D008979 1.4e-08 65.5 61 49.2
Aqoxy1G00377 Aquilegia oxysepala HOM05D007340 ORTHO05D008979 3.0e-08 64.3 58 44.8
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 2.6e-07 61.2 111 36.9
CDE04G1227 Ceratophyllum demersum HOM05D007340 ORTHO05D008979 4.4e-07 60.5 103 32.0


User provided reference genes

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