Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 0.0e+00 1414.8 723 100.0
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 0.0e+00 1307.7 723 91.1
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 0.0e+00 1264.6 723 88.4
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 0.0e+00 1228.0 792 80.7
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 0.0e+00 1216.8 724 85.1
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 0.0e+00 1197.2 700 86.6
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 0.0e+00 1161.4 723 82.3
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 0.0e+00 1159.8 719 80.8
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 0.0e+00 1152.5 723 79.9
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 0.0e+00 1140.6 723 79.8
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 0.0e+00 1137.9 724 78.9
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 0.0e+00 1137.1 728 78.6
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 0.0e+00 1137.1 724 79.1
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 0.0e+00 1134.0 724 79.1
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 0.0e+00 1130.9 724 79.0
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 0.0e+00 1130.2 727 79.4
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 0.0e+00 1119.0 725 77.9
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 0.0e+00 1116.3 721 77.5
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 0.0e+00 1112.1 724 77.9
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 0.0e+00 1110.1 724 77.9
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 0.0e+00 1100.5 724 77.5
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 0.0e+00 1099.3 723 77.9
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 0.0e+00 1094.3 721 75.5
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 0.0e+00 1093.2 728 76.0
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 0.0e+00 1089.7 721 75.2
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 0.0e+00 1088.2 722 75.6
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 0.0e+00 1087.4 729 74.6
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 0.0e+00 1082.4 727 75.4
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 0.0e+00 1079.7 724 76.4
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 0.0e+00 1077.8 722 74.9
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 0.0e+00 1077.4 836 67.9
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 0.0e+00 1077.0 724 75.8
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 4.9e-312 1074.7 727 74.7
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 4.9e-312 1074.3 724 75.6
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 9.9e-312 1072.8 727 74.6
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 3.5e-311 1071.2 727 75.8
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 5.9e-311 1070.5 727 74.4
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 8.3e-310 1066.6 727 74.0
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 2.1e-308 1062.0 737 75.0
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 3.5e-308 1061.2 722 74.5
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 4.6e-308 1060.8 721 74.6
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 4.6e-308 1060.8 717 74.9
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 7.8e-308 1060.1 721 74.3
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 2.3e-307 1058.5 723 71.9
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 8.6e-307 1056.6 730 74.9
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 1.6e-305 1052.4 734 73.6
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 6.2e-305 1050.4 725 74.1
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 2.6e-303 1045.0 713 74.2
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 1.7e-302 1042.3 724 72.9
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 1.9e-301 1038.9 724 74.2
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 1.5e-298 1029.2 727 72.1
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 2.5e-298 1028.5 727 72.2
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 4.4e-295 1017.7 720 73.5
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 2.4e-293 1011.9 723 69.7
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 2.4e-293 1011.9 731 72.4
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 9.3e-293 1010.0 724 71.5
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 1.6e-292 1009.2 727 71.8
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 7.3e-290 1000.3 729 71.9
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 5.8e-287 990.7 724 72.0
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 7.6e-287 990.3 721 70.9
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 8.4e-286 986.9 732 70.2
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 4.2e-285 984.6 621 79.9
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 1.3e-283 979.5 728 70.5
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.4e-277 959.5 726 66.8
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 2.7e-276 955.3 651 74.7
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 7.6e-271 937.2 723 66.0
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 3.8e-270 934.9 723 65.4
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 5.5e-269 931.0 722 64.5
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 3.5e-268 928.3 724 65.6
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 7.9e-268 927.2 724 64.6
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 2.3e-267 925.6 724 64.5
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 5.1e-267 924.5 723 64.2
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 5.1e-267 924.5 723 64.2
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 5.1e-267 924.5 723 64.2
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 5.1e-267 924.5 723 64.6
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 3.3e-266 921.8 723 65.0
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 1.6e-265 919.5 723 64.9
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 1.4e-253 879.8 713 63.3
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 3.6e-244 848.6 727 60.0
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 1.0e-243 847.0 727 59.8
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 9.7e-234 813.9 588 70.2
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 1.5e-226 790.0 666 61.7
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 6.3e-217 758.1 479 78.3
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 1.8e-211 740.0 671 60.4
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 1.1e-205 720.7 471 78.6
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 9.5e-205 717.6 734 54.2
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.2e-196 690.6 601 61.7
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 2.1e-188 663.3 679 52.7
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 6.8e-187 658.3 679 51.8
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 1.2e-183 647.5 437 76.9
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 3.9e-182 642.5 679 50.5
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 1.2e-178 630.9 671 50.5
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 1.0e-166 591.3 428 71.5
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 6.4e-161 572.0 430 65.8
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 1.4e-160 570.9 506 61.3
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 1.3e-153 547.7 672 46.1
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 1.5e-146 524.2 376 71.5
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.7e-140 504.2 392 64.5
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.8e-139 500.7 479 57.8
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 6.7e-134 482.3 301 77.1
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 3.8e-129 466.5 660 39.1
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 2.3e-126 457.2 392 62.5
Os04g0347600 Oryza sativa ssp. japonica HOM05D006472 ORTHO05D008222 8.5e-121 438.7 334 66.5
ClCG10G000010 Citrullus lanatus HOM05D006472 ORTHO05D008222 1.6e-114 417.9 325 68.3
Cpa.g.sc2.261 Carica papaya HOM05D006472 ORTHO05D008222 6.8e-110 402.5 313 68.7
CARHR264090 Cardamine hirsuta HOM05D006472 ORTHO05D008222 5.5e-104 382.9 296 66.9
Cc01_g15520 Coffea canephora HOM05D006472 ORTHO05D008222 3.0e-102 377.1 269 72.1
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 4.4e-101 373.2 584 40.2
Nn5g26768 Nelumbo nucifera HOM05D006472 ORTHO05D008222 2.9e-97 360.5 231 78.4
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 8.6e-89 332.4 237 69.2
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 2.2e-84 317.8 213 72.8
Gorai.003G153200 Gossypium raimondii HOM05D006472 ORTHO05D008222 2.1e-58 231.5 161 76.4
Ciclev10004061m.g Citrus clementina HOM05D006472 ORTHO05D008222 3.0e-57 227.6 153 77.1
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 7.3e-56 223.0 148 71.6
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 4.3e-48 197.2 137 70.1
MCO15G146 Micromonas commoda HOM05D006472 ORTHO05D008222 2.5e-35 154.8 743 24.9
Peaxi162Scf00293g00815 Petunia axillaris HOM05D006472 ORTHO05D008222 3.2e-27 127.9 105 64.8
SEGI_41332 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 1.4e-22 112.5 70 78.6
Lsat_1_v5_gn_5_131141 Lactuca sativa HOM05D006472 ORTHO05D008222 4.7e-18 97.4 69 68.1
Actinidia23826 Actinidia chinensis HOM05D006472 ORTHO05D008222 1.8e-17 95.5 66 74.2
Cre12.g532650 Chlamydomonas reinhardtii HOM05D006472 ORTHO05D008222 2.6e-13 81.6 680 23.2
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 3.0e-09 68.2 52 57.7
Medtr5g078560 Medicago truncatula HOM05D006472 ORTHO05D008222 8.8e-09 66.6 45 68.9


User provided reference genes

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