Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 8.8e-58 226.9 125 100.0
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 2.5e-44 182.2 125 77.6
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 7.8e-22 107.5 97 59.8
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 7.3e-20 100.9 111 54.1
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 9.5e-20 100.5 111 54.1
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 1.2e-19 100.1 95 60.0
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.1e-19 99.4 96 56.2
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.7e-19 98.2 111 53.2
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.8e-18 96.3 111 50.5
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 8.9e-18 94.0 105 53.3
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.7e-16 89.7 107 50.5
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 3.7e-16 88.6 105 50.5
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 7.0e-15 84.3 78 53.8
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 9.2e-15 84.0 114 45.6
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 3.5e-14 82.0 123 44.7
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.5e-14 82.0 96 51.0
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 4.6e-14 81.6 123 41.5
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.0e-13 80.5 110 47.3
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.7e-13 79.7 96 50.0
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.0e-13 79.0 97 46.4
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.1e-12 77.0 110 47.3
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 3.3e-12 75.5 105 41.9
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 7.3e-12 74.3 97 43.3
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.6e-11 73.2 77 49.4
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.8e-11 72.4 92 44.6
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.6e-11 72.0 116 39.7
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 6.2e-11 71.2 114 35.1
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 6.2e-11 71.2 109 41.3
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 8.1e-11 70.9 109 40.4
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 1.4e-10 70.1 121 38.0
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 1.4e-10 70.1 97 42.3
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.8e-10 69.7 109 41.3
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.3e-10 69.3 111 39.6
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 3.1e-10 68.9 98 41.8
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.1e-10 68.9 104 44.2
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 3.1e-10 68.9 111 40.5
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 3.1e-10 68.9 115 39.1
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 6.8e-10 67.8 114 37.7
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 6.8e-10 67.8 111 38.7
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 6.8e-10 67.8 105 41.0
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 8.9e-10 67.4 94 45.7
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.2e-09 67.0 102 44.1
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 1.2e-09 67.0 97 39.2
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.5e-09 66.6 111 37.8
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 1.5e-09 66.6 100 39.0
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.4e-09 65.5 113 38.9
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 7.5e-09 64.3 104 40.4
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.5e-09 64.3 102 44.1
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 9.9e-09 63.9 96 40.6
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 9.9e-09 63.9 124 36.3
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 1.3e-08 63.5 84 42.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.5 84 46.4
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 1.7e-08 63.2 116 38.8
TWI79G1510 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.7e-08 63.2 94 44.7
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-08 62.8 97 45.4
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 3.7e-08 62.0 113 38.9
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.7e-08 62.0 110 43.6
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 3.7e-08 62.0 90 41.1
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 4.9e-08 61.6 103 41.7
COL.COLO4_03329 Corchorus olitorius HOM05D007556 ORTHO05D002252 4.9e-08 61.6 100 38.0
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 6.4e-08 61.2 83 37.3
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.3e-08 60.8 93 45.2
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 8.3e-08 60.8 92 44.6
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.9e-07 59.7 101 39.6
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 1.9e-07 59.7 110 34.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 2.4e-07 59.3 112 39.3
CiPaw.06G136400 Carya illinoinensis HOM05D007556 ORTHO05D002252 3.2e-07 58.9 97 39.2
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.2e-07 58.9 97 42.3
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 3.2e-07 58.9 104 40.4
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.1e-07 58.5 86 40.7
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 5.4e-07 58.2 101 45.5
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 7.1e-07 57.8 112 37.5
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 1.2e-06 57.0 107 34.6
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 3.5e-06 55.5 95 33.7
Sabra09G0087900 Salix brachista HOM05D007556 ORTHO05D002252 3.5e-06 55.5 62 51.6
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 3.5e-06 55.5 61 42.6
Sc08g0000440 Simmondsia chinensis HOM05D007227 ORTHO05D002252 4.6e-06 55.1 51 54.9
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 7.8e-06 54.3 109 37.6
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.8e-06 54.3 86 38.4


User provided reference genes

Program Settings