Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 0.0e+00 1140.9 572 100.0
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 5.6e-293 1010.4 568 87.7
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 3.4e-290 1001.1 568 86.4
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 4.3e-285 984.2 566 85.0
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 3.1e-283 978.0 566 84.8
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 5.4e-280 967.2 570 83.5
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 9.6e-277 956.4 567 81.8
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 3.4e-274 948.0 568 81.0
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 2.2e-273 945.3 567 81.1
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 3.5e-271 937.9 568 79.6
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 8.7e-270 933.3 572 80.1
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.9e-269 932.2 568 80.5
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 7.4e-269 930.2 571 80.0
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 1.3e-268 929.5 568 80.5
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 2.1e-268 928.7 566 80.2
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 6.2e-268 927.2 571 79.9
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 6.2e-268 927.2 569 79.3
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 4.0e-267 924.5 569 79.4
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 9.0e-267 923.3 579 77.5
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 1.5e-266 922.5 577 78.3
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 1.5e-266 922.5 568 79.8
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 2.0e-266 922.2 594 77.1
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.6e-266 921.8 577 78.3
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 1.7e-265 919.1 568 78.5
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.7e-265 919.1 569 79.1
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 2.2e-265 918.7 577 77.6
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 3.8e-265 917.9 569 79.1
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.8e-265 917.9 569 79.3
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 3.8e-265 917.9 568 79.0
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 6.5e-265 917.1 568 78.3
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 6.5e-265 917.1 569 78.7
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 6.5e-265 917.1 568 79.2
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 1.4e-264 916.0 576 78.3
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 1.2e-263 912.9 578 77.2
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 1.2e-263 912.9 573 78.2
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 6.0e-263 910.6 568 77.8
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 1.0e-262 909.8 570 79.1
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 1.8e-262 909.1 568 76.6
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.3e-262 908.7 565 80.9
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 5.1e-262 907.5 572 77.6
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 5.1e-262 907.5 569 78.6
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 8.7e-262 906.7 569 77.3
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 1.9e-261 905.6 569 77.7
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 2.5e-261 905.2 602 74.8
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 2.5e-261 905.2 567 78.3
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 2.2e-260 902.1 577 77.3
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.7e-260 901.4 577 77.3
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 4.8e-260 901.0 570 77.7
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 1.4e-259 899.4 569 77.3
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 1.8e-259 899.0 571 77.1
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 3.1e-259 898.3 569 77.9
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 5.3e-259 897.5 574 76.7
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 6.9e-259 897.1 568 77.8
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 3.4e-258 894.8 570 77.2
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 5.9e-258 894.0 529 81.9
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 8.5e-257 890.2 568 77.1
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 8.5e-257 890.2 514 83.3
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 4.2e-256 887.9 559 77.3
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 2.1e-255 885.6 572 74.7
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 3.6e-255 884.8 572 74.5
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 4.6e-255 884.4 572 74.1
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 1.4e-254 882.9 572 74.3
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 1.4e-254 882.9 573 75.4
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 2.3e-254 882.1 514 82.5
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 3.0e-254 881.7 573 74.3
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 1.1e-253 879.8 572 74.0
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 1.5e-253 879.4 570 75.8
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 1.9e-253 879.0 570 75.1
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 1.9e-253 879.0 572 74.0
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 2.5e-253 878.6 572 74.5
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 3.3e-253 878.2 579 75.5
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 4.3e-253 877.9 572 74.0
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 7.4e-253 877.1 572 74.1
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 7.4e-253 877.1 572 74.1
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 1.3e-252 876.3 570 74.6
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 1.3e-252 876.3 573 74.0
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 1.4e-251 872.8 570 74.2
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 1.4e-251 872.8 572 74.8
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 3.1e-251 871.7 563 74.2
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 6.9e-251 870.5 569 74.2
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 9.1e-251 870.2 566 74.6
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 3.4e-250 868.2 574 73.3
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 4.5e-250 867.8 558 75.6
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 2.9e-249 865.1 623 70.8
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 5.0e-249 864.4 553 74.7
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 6.5e-249 864.0 573 73.5
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 5.5e-248 860.9 573 73.3
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.7e-247 858.6 575 74.6
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 3.6e-247 858.2 572 72.9
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 8.8e-246 853.6 589 72.0
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 1.5e-245 852.8 573 74.0
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 2.0e-245 852.4 543 75.0
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 2.8e-244 848.6 529 78.4
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 1.4e-240 836.3 571 71.6
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 9.1e-235 817.0 529 73.0
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 3.5e-234 815.1 658 65.8
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 1.6e-231 806.2 570 68.4
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 4.4e-229 798.1 556 71.6
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 1.5e-224 783.1 495 77.0
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 5.2e-214 748.0 448 79.5
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 2.8e-212 742.3 621 61.2
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.7e-212 741.9 571 66.0
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 7.3e-208 727.6 437 80.8
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 4.0e-206 721.8 435 81.1
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.3e-204 716.8 431 84.2
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 2.5e-200 702.6 439 78.6
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.4e-197 692.2 408 79.7
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 4.3e-184 648.7 435 74.9
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.2e-181 640.6 428 77.3
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 3.0e-177 625.9 541 57.7
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 1.3e-167 594.0 436 69.5
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 2.0e-165 586.6 369 82.1
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 3.4e-157 559.3 588 52.6
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 1.6e-146 523.9 578 51.4
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 2.7e-146 523.1 552 50.5
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.0e-121 441.4 578 42.4
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 3.7e-119 433.0 371 62.0
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.7e-95 354.4 276 68.8
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.6e-93 347.8 582 40.7
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 7.8e-93 345.5 222 71.2
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 6.6e-92 342.4 213 80.3
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 7.0e-86 322.4 216 76.4
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 4.3e-83 313.2 223 63.7
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 3.2e-70 270.4 554 34.1
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 8.1e-66 255.8 578 32.9
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 8.1e-58 229.2 126 85.7
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 1.1e-57 228.8 451 37.3
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.4e-57 227.6 148 77.0
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 9.0e-57 225.7 151 74.2
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.2e-54 216.9 139 77.7
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 1.8e-44 184.9 95 82.1
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 1.3e-42 178.7 191 59.2
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 2.7e-37 161.0 138 63.8
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.2e-29 135.6 86 77.9
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.4e-22 112.1 74 68.9
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 1.3e-15 89.0 50 72.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 2.2e-15 88.2 60 60.0
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 9.4e-14 82.8 59 79.7
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 3.0e-12 77.8 49 71.4
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 7.0e-09 66.6 343 27.7
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 8.5e-07 59.7 390 23.3
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.9e-06 58.5 320 25.0


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