Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014575 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.9e-51 205.7 113 100.0
CSS0018014 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.8e-34 148.7 84 98.8
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 7.3e-27 124.0 83 84.3
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 1.9e-14 82.8 88 62.5
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 3.5e-13 78.6 86 61.6
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 6.0e-13 77.8 83 63.9
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 2.3e-12 75.9 76 60.5
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 5.0e-12 74.7 83 59.0
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 9.5e-11 70.5 89 56.2
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 2.8e-10 68.9 86 57.0
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 2.8e-10 68.9 76 61.8
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 4.7e-10 68.2 87 54.0
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 1.1e-09 67.0 93 52.7
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 1.1e-09 67.0 93 52.7
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 1.1e-09 67.0 76 52.6
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.4e-09 66.6 78 59.0
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 5.2e-09 64.7 84 56.0
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 3.4e-08 62.0 83 53.0
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 7.5e-08 60.8 84 54.8
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 9.9e-08 60.5 84 54.8
Sc16g0000790 Simmondsia chinensis HOM05D003733 ORTHO05D004035 9.9e-08 60.5 98 49.0
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 2.2e-07 59.3 85 51.8
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 2.9e-07 58.9 96 51.0
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 6.4e-07 57.8 90 47.8
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 6.4e-07 57.8 74 56.8
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 6.4e-07 57.8 83 54.2
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 9.2e-06 53.9 83 51.8
HanXRQChr12g0366081 Helianthus annuus HOM05D003733 ORTHO05D004035 9.2e-06 53.9 83 49.4


User provided reference genes

Program Settings