Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014565 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 0.0e+00 2155.2 1058 100.0
CSS0019531 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 0.0e+00 2107.0 1058 97.8
Actinidia21354 Actinidia chinensis HOM05D004810 ORTHO05D006272 0.0e+00 1663.3 1060 78.2
Rhsim13G0000700 Rhododendron simsii HOM05D004810 ORTHO05D006272 0.0e+00 1605.5 1072 74.8
QL12p034348 Quercus lobata HOM05D004810 ORTHO05D006272 0.0e+00 1298.1 1109 60.5
vmacro02367 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 0.0e+00 1290.0 875 74.2
GSVIVG01028203001 Vitis vinifera HOM05D004810 ORTHO05D006272 0.0e+00 1288.1 1065 62.5
Haze_05120 Corylus avellana HOM05D004810 ORTHO05D006272 0.0e+00 1282.3 1067 61.8
Atru.chr5.899 Acer truncatum HOM05D004810 ORTHO05D006272 0.0e+00 1273.5 1068 60.5
Cfa004881 Carpinus fangiana HOM05D004810 ORTHO05D006272 0.0e+00 1273.1 1067 61.4
Thecc.01G322600 Theobroma cacao HOM05D004810 ORTHO05D006272 0.0e+00 1227.2 1067 58.1
Potri.002G189400 Populus trichocarpa HOM05D004810 ORTHO05D006272 0.0e+00 1226.8 1060 60.0
Ciclev10018506m.g Citrus clementina HOM05D004810 ORTHO05D006272 0.0e+00 1225.3 1068 58.3
CiPaw.07G123600 Carya illinoinensis HOM05D004810 ORTHO05D006272 0.0e+00 1206.8 1072 58.9
MD09G1293000 Malus domestica HOM05D004810 ORTHO05D006272 0.0e+00 1206.8 1057 59.3
TAR362G0253 Trochodendron aralioides HOM05D004810 ORTHO05D006272 0.0e+00 1200.7 1065 59.2
COL.COLO4_23155 Corchorus olitorius HOM05D004810 ORTHO05D006272 0.0e+00 1199.1 1057 57.4
Duzib138G1217 Durio zibethinus HOM05D004810 ORTHO05D006272 0.0e+00 1194.1 1063 58.2
Prupe.3G004200 Prunus persica HOM05D004810 ORTHO05D006272 0.0e+00 1171.0 1056 59.2
Sabra02G0166300 Salix brachista HOM05D004810 ORTHO05D006272 0.0e+00 1171.0 1143 54.9
FvH4_1g26470 Fragaria vesca HOM05D004810 ORTHO05D006272 0.0e+00 1170.6 1059 58.0
FAN19G2038 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1169.1 1059 57.9
FAN23G0904 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1166.0 1060 58.1
FAN26G0889 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1157.1 1055 57.9
RcHm_v2.0_Chr3g0486381 Rosa chinensis HOM05D004810 ORTHO05D006272 0.0e+00 1154.8 1056 57.9
Manes.05G010600 Manihot esculenta HOM05D004810 ORTHO05D006272 0.0e+00 1153.3 1060 56.8
TWI14G1319 Tripterygium wilfordii HOM05D004810 ORTHO05D006272 0.0e+00 1149.4 1061 56.4
Gorai.008G136000 Gossypium raimondii HOM05D004810 ORTHO05D006272 0.0e+00 1149.0 1058 56.4
Sopen01g030000 Solanum pennellii HOM05D004810 ORTHO05D006272 0.0e+00 1148.7 1076 55.2
Gohir.A12G121200 Gossypium hirsutum HOM05D004810 ORTHO05D006272 0.0e+00 1142.1 1057 56.5
Nn3g21885 Nelumbo nucifera HOM05D004810 ORTHO05D006272 0.0e+00 1137.5 1060 55.3
Hma1.2p1_0484F.1_g162890 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 0.0e+00 1130.2 828 68.2
Lj1g0015466 Lotus japonicus HOM05D004810 ORTHO05D006272 0.0e+00 1124.8 1058 54.9
Medtr7g110260 Medicago truncatula HOM05D004810 ORTHO05D006272 0.0e+00 1121.3 1060 55.4
Glyma.19G220100 Glycine max HOM05D004810 ORTHO05D006272 0.0e+00 1114.0 1060 55.4
Lalb_Chr04g0260131 Lupinus albus HOM05D004810 ORTHO05D006272 0.0e+00 1104.7 1056 53.6
TPR.G4131 Trifolium pratense HOM05D004810 ORTHO05D006272 0.0e+00 1102.0 1060 54.2
Phvul.001G216500 Phaseolus vulgaris HOM05D004810 ORTHO05D006272 0.0e+00 1100.9 1064 54.1
Sed0025982 Sechium edule HOM05D004810 ORTHO05D006272 0.0e+00 1099.0 1061 54.9
arahy.Tifrunner.gnm1.ann1.NAX4N2 Arachis hypogaea HOM05D004810 ORTHO05D006272 0.0e+00 1092.8 1058 53.7
DCAR_018250 Daucus carota HOM05D004810 ORTHO05D006272 0.0e+00 1092.8 1109 52.1
MSTRG.21726 Avicennia marina HOM05D004810 ORTHO05D006272 0.0e+00 1092.4 1072 54.0
Aqoxy5G02779 Aquilegia oxysepala HOM05D004810 ORTHO05D006272 0.0e+00 1090.1 1067 54.1
Eucgr.K00589 Eucalyptus grandis HOM05D004810 ORTHO05D006272 0.0e+00 1090.1 1059 54.2
Cc01_g21880 Coffea canephora HOM05D004810 ORTHO05D006272 0.0e+00 1088.9 1117 52.8
VMungo1383G1823 Vigna mungo HOM05D004810 ORTHO05D006272 0.0e+00 1087.4 1052 54.4
arahy.Tifrunner.gnm1.ann1.RS5E8T Arachis hypogaea HOM05D004810 ORTHO05D006272 0.0e+00 1086.2 1055 53.1
Ca_09236_v3 Cicer arietinum L. HOM05D004810 ORTHO05D006272 0.0e+00 1079.7 1059 53.5
CsaV3_3G031590 Cucumis sativus L. HOM05D004810 ORTHO05D006272 6.5e-311 1070.8 1059 52.9
PGR142G2149 Punica granatum HOM05D004810 ORTHO05D006272 5.5e-310 1067.8 1059 53.4
PSO170G6261 Papaver somniferum HOM05D004810 ORTHO05D006272 9.3e-310 1067.0 1068 52.7
AUR62011731 Chenopodium quinoa HOM05D004810 ORTHO05D006272 5.1e-308 1061.2 1059 53.3
PSO357G0647 Papaver somniferum HOM05D004810 ORTHO05D006272 1.1e-307 1060.1 1068 52.7
EL10As5g23578 Beta vulgaris HOM05D004810 ORTHO05D006272 4.8e-306 1054.7 1062 52.7
THA.LOC104825930 Tarenaya hassleriana HOM05D004810 ORTHO05D006272 1.4e-302 1043.1 1057 51.5
Sp6g01700 Schrenkiella parvula HOM05D004810 ORTHO05D006272 4.2e-302 1041.6 1061 51.7
Nitab4.5_0000222g0280 Nicotiana tabacum HOM05D004810 ORTHO05D006272 1.2e-301 1040.0 1072 52.2
Thhalv10027621m.g Eutrema salsugineum HOM05D004810 ORTHO05D006272 2.1e-301 1039.3 1056 50.7
BcaB01g02106 Brassica carinata HOM05D004810 ORTHO05D006272 5.1e-300 1034.6 1059 51.7
Lj2C1214G2 Lonicera japonica HOM05D004810 ORTHO05D006272 5.1e-300 1034.6 1066 53.8
Aa31LG5G1530 Aethionema arabicum HOM05D004810 ORTHO05D006272 8.8e-300 1033.9 1054 51.2
AL6G51450 Arabidopsis lyrata HOM05D004810 ORTHO05D006272 7.4e-299 1030.8 1052 50.4
Carub.0006s3538 Capsella rubella HOM05D004810 ORTHO05D006272 2.2e-298 1029.2 1058 51.0
AT4G01860 Arabidopsis thaliana HOM05D004810 ORTHO05D006272 3.4e-296 1021.9 1055 50.4
A09p01330 Brassica napus HOM05D004810 ORTHO05D006272 2.9e-295 1018.8 1061 51.6
MELO3C012913.2 Cucumis melo HOM05D004810 ORTHO05D006272 2.9e-295 1018.8 1061 52.2
MBI18_g09625_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D006272 3.8e-295 1018.5 1058 52.5
Gohir.D12G125000 Gossypium hirsutum HOM05D004810 ORTHO05D006272 1.1e-294 1016.9 946 56.0
BraA09t35800Z Brassica rapa HOM05D004810 ORTHO05D006272 5.5e-294 1014.6 1060 51.5
C09p01390 Brassica napus HOM05D004810 ORTHO05D006272 4.7e-293 1011.5 1059 51.2
BcaC04g24069 Brassica carinata HOM05D004810 ORTHO05D006272 2.0e-291 1006.1 1059 51.4
SGA_v2.0_scaffold80G25689 Striga asiatica HOM05D004810 ORTHO05D006272 4.5e-288 995.0 1077 50.8
BolC9t53072H Brassica oleracea HOM05D004810 ORTHO05D006272 2.9e-287 992.3 1059 50.7
FAN28G1956 Fragaria x ananassa HOM05D004810 ORTHO05D006272 3.8e-287 991.9 1134 50.1
HanXRQChr06g0167991 Helianthus annuus HOM05D004810 ORTHO05D006272 3.8e-287 991.9 1048 51.3
Lsat_1_v5_gn_8_167321 Lactuca sativa HOM05D004810 ORTHO05D006272 1.7e-282 976.5 1056 50.7
Psat3g018400 Pisum sativum HOM05D004810 ORTHO05D006272 1.8e-276 956.4 1055 49.5
ATR0796G051 Amborella trichopoda HOM05D004810 ORTHO05D006272 6.3e-274 948.0 1088 48.7
ClCG10G011790 Citrullus lanatus HOM05D004810 ORTHO05D006272 8.3e-274 947.6 1018 50.9
Hund09692 Selenicereus undatus HOM05D004810 ORTHO05D006272 8.3e-274 947.6 1033 51.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 7.2e-270 934.5 1029 50.8
Dinv12098 Davidia involucrata HOM05D004810 ORTHO05D006272 4.7e-261 905.2 641 72.1
CDE05G2014 Ceratophyllum demersum HOM05D004810 ORTHO05D006272 5.7e-259 898.3 1074 46.1
Hma1.2p1_0484F.1_g162880 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 1.6e-253 880.2 634 68.0
Os03g0111800 Oryza sativa ssp. japonica HOM05D004810 ORTHO05D006272 2.8e-245 852.8 1055 45.3
HPP92_017301 Vanilla planifolia HOM05D004810 ORTHO05D006272 1.2e-240 837.4 1067 44.5
Sc18g0007580 Simmondsia chinensis HOM05D004810 ORTHO05D006272 2.8e-237 826.2 741 58.0
AUR62024565 Chenopodium quinoa HOM05D004810 ORTHO05D006272 8.1e-221 771.5 853 49.9
Oeu044753.1 Olea europaea HOM05D004810 ORTHO05D006272 3.2e-217 759.6 784 52.8
Nitab4.5_0002994g0090 Nicotiana tabacum HOM05D004810 ORTHO05D006272 4.9e-210 735.7 755 52.6
CARHR249820 Cardamine hirsuta HOM05D004810 ORTHO05D006272 1.5e-206 724.2 711 51.8
Zm00001eb404090 Zea mays HOM05D004810 ORTHO05D006272 1.4e-167 594.7 799 43.9
Migut.D00025 Erythranthe guttata HOM05D004810 ORTHO05D006272 2.0e-163 580.9 653 48.9
SEGI_19859 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 1.7e-162 577.8 755 43.6
unitig_62.g23902 Utricularia gibba HOM05D004810 ORTHO05D006272 7.5e-158 562.4 1013 36.7
SEGI_21204 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 8.5e-154 548.9 877 40.1
Pp3c3_23690 Physcomitrium patens HOM05D004810 ORTHO05D006272 2.5e-153 547.4 1145 34.7
Mapoly0020s0127 Marchantia polymorpha HOM05D004810 ORTHO05D006272 1.6e-152 544.7 1171 32.5
Dinv12097 Davidia involucrata HOM05D004810 ORTHO05D006272 2.3e-151 540.8 391 69.8
AagrBONN_evm.TU.Sc2ySwM_344.1995 Anthoceros agrestis HOM05D004810 ORTHO05D006272 1.7e-141 508.1 1142 32.7
Migut.D00026 Erythranthe guttata HOM05D004810 ORTHO05D006272 1.7e-130 471.5 391 60.1
Cpa.g.sc67.77 Carica papaya HOM05D004810 ORTHO05D006272 2.4e-111 407.9 319 63.3
SMO137G0268 Selaginella moellendorffii HOM05D004810 ORTHO05D006272 1.1e-103 382.5 1055 29.7
SHI15445 Sapria himalayana HOM05D004810 ORTHO05D006272 1.3e-101 375.6 470 47.0
MD17G1281400 Malus domestica HOM05D004810 ORTHO05D006272 4.8e-96 357.1 318 60.1
Oeu044752.1 Olea europaea HOM05D004810 ORTHO05D006272 1.2e-86 325.9 254 62.6
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 3.8e-85 320.9 254 63.0
SHI15448 Sapria himalayana HOM05D000105 ORTHO05D000023 4.2e-84 317.4 303 56.8
vmacro02368 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 3.0e-82 311.2 232 66.8
MD17G1281700 Malus domestica HOM05D004810 ORTHO05D006272 8.2e-72 276.6 269 57.6
Cpa.g.sc3588.1 Carica papaya HOM05D004810 ORTHO05D006272 6.9e-71 273.5 255 57.6
RcHm_v2.0_Chr3g0486501 Rosa chinensis HOM05D004810 ORTHO05D006272 8.5e-61 240.0 244 57.0
FAN10G1333 Fragaria x ananassa HOM05D004810 ORTHO05D006272 4.7e-59 234.2 257 52.1
Solyc01g068070.4 Solanum lycopersicum HOM05D004810 ORTHO05D006272 1.9e-52 212.2 204 53.9
RcHm_v2.0_Chr3g0486491 Rosa chinensis HOM05D004810 ORTHO05D006272 1.8e-50 205.7 191 52.9
Psat4g129960 Pisum sativum HOM05D004810 ORTHO05D006272 1.6e-43 182.6 184 49.5
CBR_g26439 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-40 172.2 621 25.6
Actinidia06394 Actinidia chinensis HOM05D004810 ORTHO05D006272 6.3e-40 170.6 155 57.4
MD17G1281800 Malus domestica HOM05D004810 ORTHO05D006272 2.8e-35 155.2 100 72.0
RcHm_v2.0_Chr3g0486511 Rosa chinensis HOM05D004810 ORTHO05D006272 6.8e-34 150.6 190 46.3
FAN24G0870 Fragaria x ananassa HOM05D004810 ORTHO05D006272 1.8e-31 142.5 161 46.6
SEGI_39451 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 3.1e-31 141.7 151 45.7
Psat0s2464g0040 Pisum sativum HOM05D004810 ORTHO05D006272 6.6e-29 134.0 111 53.2
SHI15443 Sapria himalayana HOM05D004810 ORTHO05D006272 4.3e-28 131.3 252 33.7
FvH4_2g08080 Fragaria vesca HOM05D004810 ORTHO05D006272 1.3e-24 119.8 130 46.2
CAN.G100.30 Capsicum annuum HOM05D004810 ORTHO05D006272 5.4e-23 114.4 85 62.4
MCO01G012 Micromonas commoda HOM05D004810 ORTHO05D006272 5.4e-23 114.4 1217 22.3
Lsat_1_v5_gn_2_51680 Lactuca sativa HOM05D004810 ORTHO05D006272 7.8e-22 110.5 115 47.0
PRCOL_00001957 Prasinoderma coloniale HOM05D004810 ORTHO05D006272 1.9e-20 105.9 609 21.3
SEGI_09896 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 3.7e-16 91.7 104 45.2
Hund09691 Selenicereus undatus HOM05D004810 ORTHO05D006272 1.2e-14 86.7 74 59.5
FvH4_6g28340 Fragaria vesca HOM05D003050 ORTHO05D006272 6.6e-13 80.9 104 46.2
MBI14_g40313_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 6.6e-13 80.9 63 68.3
MBI15_g23571_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 6.6e-13 80.9 63 68.3
MBI13_g10212_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 9.5e-12 77.0 63 66.7
MBI14_g17170_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 8.1e-11 73.9 55 72.7
FAN14G3945 Fragaria x ananassa HOM05D004810 ORTHO05D029461 1.1e-10 73.6 56 60.7
MBI19_g30553_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 3.1e-10 72.0 51 76.5
Actinidia10458 Actinidia chinensis HOM05D000038 ORTHO05D053114 1.2e-09 70.1 42 71.4
CBR_g26440 Chara braunii HOM05D000019 ORTHO05D000048 6.4e-08 64.3 40 62.5
FvH4_3g18411 Fragaria vesca HOM05D004810 ORTHO05D029461 6.4e-08 64.3 63 54.0
FvH4_6g46150 Fragaria vesca HOM05D004810 ORTHO05D029461 8.3e-08 63.9 56 55.4
MD17G1281500 Malus domestica HOM05D004810 ORTHO05D006272 1.2e-06 60.1 52 57.7
Psat0s3766g0080 Pisum sativum HOM05D002292 ORTHO05D006272 1.2e-06 60.1 32 75.0
Actinidia16142 Actinidia chinensis HOM05D002279 ORTHO05D006272 3.5e-06 58.5 29 75.9


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