Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.5e-34 149.1 78 100.0
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.4e-31 137.5 78 91.0
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.7e-30 134.4 78 89.7
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.8e-30 134.0 77 89.6
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.3e-30 133.7 74 91.9
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 2.4e-29 131.7 77 88.3
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 2.4e-29 131.7 77 88.3
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.0e-27 126.3 74 89.2
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.9e-27 124.8 70 92.9
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.5e-26 121.7 72 87.5
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.5e-26 121.7 77 81.8
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.5e-26 120.6 70 88.6
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.5e-26 120.6 74 83.8
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.1e-25 117.1 74 82.4
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.4e-23 111.3 67 88.1
CSS0037680 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.6e-19 96.7 57 84.2
CSS0012123 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.4e-15 84.7 49 87.8
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.8e-15 83.2 72 56.9
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.8e-15 83.2 72 56.9
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.7e-14 82.4 76 51.3
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-14 82.4 76 51.3
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 76 51.3
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 76 51.3
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 74 52.7
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 76 51.3
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-14 81.6 71 56.3
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.7e-14 81.3 76 50.0
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.7e-14 81.3 76 50.0
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-14 80.9 76 50.0
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-14 80.9 74 51.4
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-14 80.1 70 54.3
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-14 80.1 76 48.7
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-13 79.7 74 48.6
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 79.3 76 50.0
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-13 78.6 73 52.1
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-13 78.6 74 48.6
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-13 77.8 76 47.4
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 4.1e-13 77.8 66 56.1
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.1e-13 77.8 66 56.1
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 5.4e-13 77.4 77 50.6
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-12 76.3 65 58.5
CSS0030801 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.6e-12 75.9 44 86.4
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-12 75.5 74 54.1
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-12 75.5 74 54.1
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-12 75.5 74 54.1
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 2.7e-12 75.1 72 48.6
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 4.6e-12 74.3 69 52.2
CSS0006141 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.9e-12 73.9 45 82.2
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.9e-12 73.9 72 50.0
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-11 72.4 74 51.4
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-11 72.0 72 48.6
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.9e-11 71.6 78 43.6
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 6.6e-11 70.5 72 48.6
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 8.6e-11 70.1 79 46.8
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 3.3e-10 68.2 77 42.9
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 3.3e-10 68.2 76 46.1
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.3e-10 67.8 78 44.9
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 5.6e-10 67.4 78 42.3
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.6e-10 67.4 77 44.2
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 9.5e-10 66.6 65 47.7
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 9.5e-10 66.6 77 44.2
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-09 65.9 71 45.1
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-09 65.9 71 45.1
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.6e-09 65.9 64 48.4
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.6e-09 65.9 64 48.4
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-09 65.9 77 42.9
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-09 64.7 76 43.4
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 3.6e-09 64.7 73 43.8
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 3.6e-09 64.7 66 45.5
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 4.7e-09 64.3 66 45.5
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 4.7e-09 64.3 66 45.5
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 6.2e-09 63.9 67 44.8
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 6.2e-09 63.9 66 45.5
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-09 63.9 66 45.5
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-09 63.9 66 45.5
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 6.2e-09 63.9 66 45.5
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 6.2e-09 63.9 66 45.5
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 6.2e-09 63.9 78 41.0
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 8.0e-09 63.5 66 43.9
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 8.0e-09 63.5 66 47.0
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.0e-09 63.5 62 46.8
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 1.0e-08 63.2 66 45.5
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 1.0e-08 63.2 76 44.7
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.4e-08 62.8 69 47.8
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 1.4e-08 62.8 63 47.6
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-08 62.8 66 43.9
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.4e-08 62.8 77 40.3
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.4e-08 62.8 62 45.2
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 1.8e-08 62.4 66 43.9
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 1.8e-08 62.4 66 43.9
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.3e-08 62.0 69 46.4
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.3e-08 62.0 69 46.4
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 2.3e-08 62.0 76 40.8
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.1e-08 61.6 63 44.4
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 3.1e-08 61.6 66 43.9
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 4.0e-08 61.2 67 44.8
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.0e-08 61.2 62 45.2
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 5.2e-08 60.8 77 39.0
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.2e-08 60.8 77 36.4
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 5.2e-08 60.8 78 41.0
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 5.2e-08 60.8 77 36.4
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.8e-08 60.5 64 46.9
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.8e-08 60.5 69 44.9
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.8e-08 60.5 69 44.9
MBI01_g37335_MAGBIO Magnolia biondii HOM05D009540 ORTHO05D000034 6.8e-08 60.5 65 44.6
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-08 60.5 77 41.6
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 6.8e-08 60.5 75 41.3
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 8.9e-08 60.1 66 42.4
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-07 59.7 70 41.4
Manes.12G054904 Manihot esculenta HOM05D000004 ORTHO05D000034 1.2e-07 59.7 63 49.2
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-07 59.7 64 45.3
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.2e-07 59.7 62 43.5
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.2e-07 59.7 69 43.5
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 1.5e-07 59.3 67 41.8
Haze_04663 Corylus avellana HOM05D014948 ORTHO05D000034 1.5e-07 59.3 77 40.3
QL05p075262 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-07 59.3 77 41.6
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.5e-07 59.3 69 42.0
THA.LOC109117280 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.5e-07 59.3 72 37.5
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-07 58.9 70 41.4
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.0e-07 58.9 72 37.5
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.6e-07 58.5 69 42.0
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.6e-07 58.5 76 32.9
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 3.4e-07 58.2 79 44.3
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 3.4e-07 58.2 66 42.4
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 3.4e-07 58.2 61 45.9
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 4.4e-07 57.8 69 44.9
Haze_01589 Corylus avellana HOM05D014948 ORTHO05D000034 4.4e-07 57.8 77 41.6
MBI02_g02723_MAGBIO Magnolia biondii HOM05D024168 ORTHO05D013556 4.4e-07 57.8 62 46.8
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 4.4e-07 57.8 78 38.5
THA.LOC109116329 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.4e-07 57.8 72 34.7
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 5.8e-07 57.4 58 46.6
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 5.8e-07 57.4 58 46.6
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 5.8e-07 57.4 68 41.2
CSS0002976 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 7.5e-07 57.0 39 71.8
Haze_20305 Corylus avellana HOM05D014948 ORTHO05D000034 7.5e-07 57.0 66 40.9
ECA246G2936 Erigeron canadensis HOM05D000004 ORTHO05D000034 7.5e-07 57.0 87 37.9
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 7.5e-07 57.0 58 46.6
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 9.8e-07 56.6 68 41.2
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 1.7e-06 55.8 69 37.7
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 1.7e-06 55.8 58 46.6
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 1.7e-06 55.8 58 44.8
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 2.2e-06 55.5 70 38.6
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 2.2e-06 55.5 58 44.8
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 2.2e-06 55.5 61 42.6
Rhsim05G0170300 Rhododendron simsii HOM05D000111 ORTHO05D000134 2.2e-06 55.5 77 35.1
Rhsim10G0111100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.2e-06 55.5 77 33.8
Rhsim10G0111300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.2e-06 55.5 77 33.8
Rhsim11G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.2e-06 55.5 62 41.9
THA.LOC104800026 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.2e-06 55.5 69 37.7
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.9e-06 55.1 68 42.6
ClCG02G010440 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.9e-06 55.1 72 44.4
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 2.9e-06 55.1 57 45.6
Rhsim09G0059300 Rhododendron simsii HOM05D011308 ORTHO05D000034 2.9e-06 55.1 77 35.1
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.9e-06 55.1 69 39.1
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 2.9e-06 55.1 68 39.7
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-06 54.3 69 37.7
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-06 54.3 76 36.8
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 4.9e-06 54.3 70 38.6
Haze_10582 Corylus avellana HOM05D014948 ORTHO05D000034 6.4e-06 53.9 77 37.7
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 6.4e-06 53.9 68 39.7
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.4e-06 53.9 77 32.5
Rhsim07G0101500 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.4e-06 53.9 77 32.5
Rhsim08G0057000 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.4e-06 53.9 77 32.5
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-06 53.5 69 36.2
MBI19_g33419_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 8.3e-06 53.5 62 46.8
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 8.3e-06 53.5 58 44.8
THA.LOC104799777 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 8.3e-06 53.5 64 39.1


User provided reference genes

Program Settings