Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 5.3e-116 421.0 209 100.0
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.1e-68 263.8 168 79.2
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 2.8e-64 249.2 157 76.4
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.4e-62 242.3 155 75.5
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 4.4e-62 241.9 157 74.5
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.3e-61 240.4 161 75.8
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.7e-61 240.0 162 74.1
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 3.0e-58 229.2 170 67.6
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 3.9e-58 228.8 147 73.5
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 5.1e-58 228.4 170 68.2
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 8.6e-58 227.6 136 77.9
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.1e-57 227.3 170 67.6
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.5e-57 226.1 158 72.2
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 4.3e-57 225.3 163 68.1
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.3e-57 225.3 157 68.2
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 7.3e-57 224.6 174 63.8
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.6e-56 222.2 152 69.7
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.1e-55 220.7 152 69.1
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.1e-55 220.7 163 67.5
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.1e-55 220.7 153 73.2
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.4e-55 220.3 158 67.1
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.8e-55 219.9 156 67.9
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 3.1e-55 219.2 139 74.8
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 3.1e-55 219.2 184 61.4
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 6.8e-55 218.0 155 69.7
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 6.8e-55 218.0 160 68.1
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 8.9e-55 217.6 141 75.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.5e-54 216.9 157 65.6
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 2.6e-54 216.1 153 65.4
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 2.6e-54 216.1 162 66.7
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.6e-54 216.1 146 73.3
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 3.4e-54 215.7 155 69.0
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 3.4e-54 215.7 138 74.6
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 4.4e-54 215.3 152 69.7
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 7.5e-54 214.5 148 68.9
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 9.9e-54 214.2 148 67.6
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.2e-53 213.0 144 71.5
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 2.2e-53 213.0 143 73.4
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.2e-53 213.0 164 65.9
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.2e-53 213.0 183 60.7
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.7e-53 212.2 163 63.8
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 4.9e-53 211.8 147 69.4
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 6.4e-53 211.5 155 67.7
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 8.3e-53 211.1 152 65.1
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 8.3e-53 211.1 174 63.8
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 4.1e-52 208.8 149 69.1
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 7.1e-52 208.0 157 63.7
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 9.2e-52 207.6 160 63.1
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.2e-51 207.2 147 71.4
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.6e-51 206.8 149 68.5
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.6e-51 206.8 157 63.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.6e-51 206.8 139 71.9
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.5e-51 205.7 150 66.0
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 6.0e-51 204.9 151 68.9
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 7.8e-51 204.5 147 64.6
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.0e-50 204.1 152 65.1
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 2.3e-50 203.0 157 61.8
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.9e-50 202.2 144 65.3
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 3.9e-50 202.2 149 65.1
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 6.6e-50 201.4 198 51.5
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 8.6e-50 201.1 149 64.4
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 1.1e-49 200.7 147 62.6
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.5e-49 200.3 158 60.8
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.9e-49 199.9 183 56.8
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 9.5e-49 197.6 148 65.5
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.2e-48 197.2 170 60.0
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.1e-48 196.4 148 64.9
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 2.1e-48 196.4 137 67.9
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 2.8e-48 196.1 147 62.6
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.8e-48 196.1 137 67.9
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 3.6e-48 195.7 147 63.3
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 3.1e-47 192.6 203 52.2
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.1e-47 192.6 152 58.6
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 4.0e-47 192.2 148 63.5
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 6.8e-47 191.4 156 59.0
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.2e-46 190.7 148 63.5
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 3.4e-46 189.1 163 57.1
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 3.8e-45 185.7 144 60.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.1e-44 184.1 140 60.7
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.1e-44 184.1 141 62.4
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 5.4e-44 181.8 139 62.6
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 9.2e-44 181.0 149 63.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.9e-41 173.3 128 68.0
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 7.3e-33 144.8 128 55.5
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 5.3e-31 138.7 163 43.6
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.2e-29 133.3 73 83.6
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.8e-29 132.5 109 55.0
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 5.1e-26 122.1 147 44.9
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 2.5e-25 119.8 136 42.6
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 6.2e-24 115.2 85 61.2
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.6e-22 109.8 93 59.1
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.3e-18 97.4 80 60.0
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.1e-17 94.4 98 43.9
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.4e-15 86.7 112 43.8
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-14 84.0 112 42.9
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 3.4e-14 82.8 62 59.7
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.5e-11 72.8 82 46.3
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 1.1e-07 61.2 70 45.7


User provided reference genes

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