Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014542 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 1.6e-68 262.7 136 100.0
CSS0005611 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 1.9e-53 212.6 145 81.4
CSS0025796 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 9.6e-50 200.3 145 77.9
CSS0035788 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 3.4e-47 191.8 144 75.0
CSS0012854 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 3.2e-37 158.7 118 75.4
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 2.7e-36 155.6 89 94.4
CSS0044643 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 4.8e-33 144.8 136 64.7
CSS0020186 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 2.0e-31 139.4 136 62.5
Actinidia13982 Actinidia chinensis HOM05D003429 ORTHO05D003873 8.4e-30 134.0 89 77.5
Actinidia14028 Actinidia chinensis HOM05D003429 ORTHO05D003873 8.4e-30 134.0 89 77.5
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 8.4e-30 134.0 89 77.5
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 8.4e-30 134.0 89 77.5
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 8.4e-30 134.0 89 78.7
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 1.1e-29 133.7 89 77.5
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 6.9e-24 114.4 99 65.7
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 6.9e-24 114.4 99 65.7
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 1.2e-23 113.6 99 64.6
Nitab4.5_0002094g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.5e-23 113.2 99 64.6
Nitab4.5_0000211g0060 Nicotiana tabacum HOM05D003429 ORTHO05D003873 3.4e-23 112.1 99 64.6
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 7.6e-23 110.9 101 61.4
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.2e-20 103.6 100 58.0
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.2e-20 103.6 100 58.0
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 2.7e-20 102.4 100 59.0
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 2.7e-20 102.4 100 59.0
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 2.7e-20 102.4 100 57.0
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 2.7e-20 102.4 89 61.8
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 2.7e-20 102.4 89 64.0
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 3.6e-20 102.1 100 61.0
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 3.6e-20 102.1 89 57.3
Cpa.g.sc33.148 Carica papaya HOM05D003429 ORTHO05D003873 4.6e-20 101.7 100 59.0
Cfa010982 Carpinus fangiana HOM05D003429 ORTHO05D003873 6.1e-20 101.3 100 59.0
Lj9A653G52 Lonicera japonica HOM05D003429 ORTHO05D003873 6.1e-20 101.3 100 57.0
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 6.1e-20 101.3 99 54.5
Ca_14865_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 7.9e-20 100.9 89 56.2
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 7.9e-20 100.9 99 60.6
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 7.9e-20 100.9 100 61.0
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 7.9e-20 100.9 99 54.5
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 7.9e-20 100.9 99 54.5
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 7.9e-20 100.9 99 54.5
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 1.0e-19 100.5 99 55.6
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 1.0e-19 100.5 100 57.0
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 1.0e-19 100.5 99 56.6
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 1.0e-19 100.5 100 57.0
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 1.0e-19 100.5 100 57.0
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 1.0e-19 100.5 99 56.6
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 1.0e-19 100.5 99 56.6
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 1.0e-19 100.5 97 53.6
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 1.4e-19 100.1 100 58.0
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 1.4e-19 100.1 99 53.5
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 1.4e-19 100.1 100 59.0
Nn7g37083 Nelumbo nucifera HOM05D003429 ORTHO05D003873 1.8e-19 99.8 88 62.5
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 2.3e-19 99.4 100 59.0
QL04p022427 Quercus lobata HOM05D003429 ORTHO05D003873 2.3e-19 99.4 99 57.6
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 2.3e-19 99.4 100 60.0
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 2.3e-19 99.4 99 53.5
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 3.0e-19 99.0 100 58.0
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 3.0e-19 99.0 99 55.6
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 3.0e-19 99.0 99 54.5
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 5.1e-19 98.2 100 58.0
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 5.1e-19 98.2 108 55.6
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 5.1e-19 98.2 99 53.5
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 6.7e-19 97.8 100 55.0
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 8.8e-19 97.4 99 57.6
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 8.8e-19 97.4 100 57.0
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 8.8e-19 97.4 100 57.0
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 8.8e-19 97.4 99 54.5
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 8.8e-19 97.4 100 54.0
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 8.8e-19 97.4 100 59.0
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 1.1e-18 97.1 100 55.0
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 1.9e-18 96.3 98 54.1
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 1.9e-18 96.3 89 59.6
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 2.5e-18 95.9 99 56.6
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 2.5e-18 95.9 100 54.0
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 2.5e-18 95.9 100 54.0
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 2.5e-18 95.9 100 54.0
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 2.5e-18 95.9 99 55.6
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 2.5e-18 95.9 99 54.5
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 2.5e-18 95.9 97 57.7
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 3.3e-18 95.5 89 60.7
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 3.3e-18 95.5 88 56.8
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 3.3e-18 95.5 98 54.1
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 3.3e-18 95.5 100 55.0
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 3.3e-18 95.5 100 57.0
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 4.3e-18 95.1 88 60.2
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 4.3e-18 95.1 88 60.2
VMungo0720G0379 Vigna mungo HOM05D003429 ORTHO05D003873 4.3e-18 95.1 90 58.9
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 5.7e-18 94.7 89 59.6
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 5.7e-18 94.7 99 52.5
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 7.4e-18 94.4 89 60.7
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 7.4e-18 94.4 99 55.6
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 7.4e-18 94.4 99 55.6
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 7.4e-18 94.4 99 55.6
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 7.4e-18 94.4 100 53.0
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 7.4e-18 94.4 100 55.0
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 9.7e-18 94.0 99 56.6
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 9.7e-18 94.0 100 54.0
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 1.3e-17 93.6 89 55.1
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 1.3e-17 93.6 99 51.5
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 1.7e-17 93.2 89 60.7
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 1.7e-17 93.2 100 54.0
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 1.7e-17 93.2 99 51.5
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 1.7e-17 93.2 99 54.5
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 2.2e-17 92.8 100 55.0
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 2.2e-17 92.8 99 51.5
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 4.8e-17 91.7 89 55.1
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 4.8e-17 91.7 89 55.1
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 6.3e-17 91.3 88 54.5
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 6.3e-17 91.3 89 55.1
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 8.2e-17 90.9 89 55.1
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 8.2e-17 90.9 89 55.1
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 1.1e-16 90.5 99 50.5
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.1e-16 90.5 99 50.5
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.1e-16 90.5 99 50.5
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.1e-16 90.5 99 50.5
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.1e-16 90.5 99 50.5
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 1.1e-16 90.5 90 51.1
Haze_02954 Corylus avellana HOM05D003429 ORTHO05D003873 1.4e-16 90.1 125 48.8
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.8e-16 89.7 99 50.5
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 4.1e-16 88.6 97 52.6
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 4.1e-16 88.6 89 53.9
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 5.3e-16 88.2 89 56.2
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 9.1e-16 87.4 89 51.7
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 1.2e-15 87.0 89 52.8
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.2e-15 87.0 100 53.0
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 2.0e-15 86.3 75 62.7
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 4.5e-15 85.1 97 52.6
SHI11319 Sapria himalayana HOM05D003429 ORTHO05D003873 5.9e-15 84.7 76 61.8
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.3e-14 83.6 89 52.8
AUR62018433 Chenopodium quinoa HOM05D003429 ORTHO05D003873 8.5e-14 80.9 112 42.0
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 1.1e-13 80.5 83 56.6
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 7.2e-13 77.8 88 46.6
AUR62021000 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.1e-12 76.3 85 47.1
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 7.9e-12 74.3 89 46.1
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.0e-11 73.9 88 44.3
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 6.7e-11 71.2 88 43.2
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 4.4e-10 68.6 94 39.4
EL10Ac3g07341 Beta vulgaris HOM05D003429 ORTHO05D003873 7.4e-10 67.8 109 36.7
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.4e-08 63.5 105 35.2
Psat6g086560 Pisum sativum HOM05D003429 ORTHO05D003873 1.8e-08 63.2 59 54.2
Rhsim09G0101900 Rhododendron simsii HOM05D003429 ORTHO05D003873 2.2e-06 56.2 69 56.5


User provided reference genes

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